RNA–Protein interactions for RNA: ENST00000260383.11

TUBGCP4-201, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUBGCP4, Length 2,617 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-201ENST00000260383 PHKA2P46019 1235 aa13.83□□□□□ -0.19
TUBGCP4-201ENST00000260383 NOVP48745 357 aa13.83□□□□□ -0.19
TUBGCP4-201ENST00000260383 PTP4A2Q12974 167 aa13.83□□□□□ -0.19
TUBGCP4-201ENST00000260383 ZFYVE27Q5T4F4 411 aa13.83□□□□□ -0.19
TUBGCP4-201ENST00000260383 DHRS4L2Q6PKH6 230 aa13.83□□□□□ -0.19
TUBGCP4-201ENST00000260383 MFSD7Q6UXD7 560 aa13.83□□□□□ -0.19
TUBGCP4-201ENST00000260383 NANOGNBQ7Z5D8 188 aa13.83□□□□□ -0.19
TUBGCP4-201ENST00000260383 ACSF2Q96CM8 615 aaPredicted RBP13.83□□□□□ -0.19
TUBGCP4-201ENST00000260383 HEPHQ9BQS7 1158 aa13.83□□□□□ -0.19
TUBGCP4-201ENST00000260383 SLC13A1Q9BZW2 595 aa13.83□□□□□ -0.19
TUBGCP4-201ENST00000260383 ZNF287Q9HBT7 754 aa13.83□□□□□ -0.19
TUBGCP4-201ENST00000260383 MTMR4Q9NYA4 1195 aa13.83□□□□□ -0.19
TUBGCP4-201ENST00000260383 SAE1Q9UBE0 346 aaPredicted RBP13.83□□□□□ -0.19
TUBGCP4-201ENST00000260383 VAV3Q9UKW4 847 aa13.83□□□□□ -0.19
TUBGCP4-201ENST00000260383 TRIM17Q9Y577 477 aa13.83□□□□□ -0.19
TUBGCP4-201ENST00000260383 FADS3Q9Y5Q0 445 aa13.83□□□□□ -0.19
TUBGCP4-201ENST00000260383 KAT6AQ92794 2004 aa13.83□□□□□ -0.2
TUBGCP4-201ENST00000260383 IQANK1A0A1B0GTG1 560 aa13.83□□□□□ -0.2
TUBGCP4-201ENST00000260383 MATN2O00339 956 aa13.83□□□□□ -0.2
TUBGCP4-201ENST00000260383 ZBTB5O15062 677 aa13.83□□□□□ -0.2
TUBGCP4-201ENST00000260383 MSH4O15457 936 aa13.83□□□□□ -0.2
TUBGCP4-201ENST00000260383 P4HA2O15460 535 aa13.83□□□□□ -0.2
TUBGCP4-201ENST00000260383 TBC1D12O60347 775 aa13.83□□□□□ -0.2
TUBGCP4-201ENST00000260383 FBXO21O94952 628 aa13.83□□□□□ -0.2
TUBGCP4-201ENST00000260383 STAMBPO95630 424 aa13.83□□□□□ -0.2
TUBGCP4-201ENST00000260383 ZBED1O96006 694 aa13.83□□□□□ -0.2
TUBGCP4-201ENST00000260383 LDHBP07195 334 aaKnown RBP13.83□□□□□ -0.2
TUBGCP4-201ENST00000260383 SNHG28P0DPA3 235 aa13.83□□□□□ -0.2
TUBGCP4-201ENST00000260383 UNGP13051 313 aaPredicted RBP13.83□□□□□ -0.2
TUBGCP4-201ENST00000260383 ITGAXP20702 1163 aa13.83□□□□□ -0.2
TUBGCP4-201ENST00000260383 MXI1P50539 228 aa13.83□□□□□ -0.2
TUBGCP4-201ENST00000260383 IRX4P78413 519 aa13.83□□□□□ -0.2
TUBGCP4-201ENST00000260383 MRPS5P82675 430 aaKnown RBP13.83□□□□□ -0.2
TUBGCP4-201ENST00000260383 ZNF543Q08ER8 600 aa13.83□□□□□ -0.2
TUBGCP4-201ENST00000260383 FASTKD5Q7L8L6 764 aaKnown RBP13.83□□□□□ -0.2
TUBGCP4-201ENST00000260383 CRLF3Q8IUI8 442 aa13.83□□□□□ -0.2
TUBGCP4-201ENST00000260383 RAB3IL1Q8TBN0 382 aa13.83□□□□□ -0.2
TUBGCP4-201ENST00000260383 CPT1BQ92523 772 aa13.83□□□□□ -0.2
TUBGCP4-201ENST00000260383 VPS50Q96JG6 964 aa13.83□□□□□ -0.2
TUBGCP4-201ENST00000260383 RANBP9Q96S59 729 aa13.83□□□□□ -0.2
TUBGCP4-201ENST00000260383 PSMD13Q9UNM6 376 aa13.83□□□□□ -0.2
TUBGCP4-201ENST00000260383 FAM32AQ9Y421 112 aaKnown RBP13.83□□□□□ -0.2
TUBGCP4-201ENST00000260383 DDX60LQ5H9U9 1706 aaKnown RBP13.83□□□□□ -0.2
TUBGCP4-201ENST00000260383 SLC5A3P53794 718 aa13.82□□□□□ -0.2
TUBGCP4-201ENST00000260383 GDF10P55107 478 aa13.82□□□□□ -0.2
TUBGCP4-201ENST00000260383 PDAP1Q13442 181 aaKnown RBP13.82□□□□□ -0.2
TUBGCP4-201ENST00000260383 ERFEQ4G0M1 354 aa13.82□□□□□ -0.2
TUBGCP4-201ENST00000260383 SLC51AQ86UW1 340 aa13.82□□□□□ -0.2
TUBGCP4-201ENST00000260383 FBXW8Q8N3Y1 598 aa13.82□□□□□ -0.2
TUBGCP4-201ENST00000260383 TRIML2Q8N7C3 387 aa13.82□□□□□ -0.2
TUBGCP4-201ENST00000260383 EXD1Q8NHP7 514 aa13.82□□□□□ -0.2
TUBGCP4-201ENST00000260383 VTI1AQ96AJ9 217 aa13.82□□□□□ -0.2
TUBGCP4-201ENST00000260383 MPHOSPH6Q99547 160 aaKnown RBP13.82□□□□□ -0.2
TUBGCP4-201ENST00000260383 DCUN1D5Q9BTE7 237 aa13.82□□□□□ -0.2
TUBGCP4-201ENST00000260383 SNCAIPQ9Y6H5 919 aa13.82□□□□□ -0.2
TUBGCP4-201ENST00000260383 PSTPIP1O43586 416 aa13.82□□□□□ -0.2
TUBGCP4-201ENST00000260383 SSTR3P32745 418 aaPredicted RBP13.82□□□□□ -0.2
TUBGCP4-201ENST00000260383 MFAP3P55082 362 aa13.82□□□□□ -0.2
TUBGCP4-201ENST00000260383 DCAF6Q58WW2 860 aa13.82□□□□□ -0.2
TUBGCP4-201ENST00000260383 RC3H1Q5TC82 1133 aaKnown RBP13.82□□□□□ -0.2
TUBGCP4-201ENST00000260383 FRMD7Q6ZUT3 714 aa13.82□□□□□ -0.2
TUBGCP4-201ENST00000260383 NUDCD3Q8IVD9 361 aa13.82□□□□□ -0.2
TUBGCP4-201ENST00000260383 LILRA2Q8N149 483 aa13.82□□□□□ -0.2
TUBGCP4-201ENST00000260383 TSPAN14Q8NG11 270 aa13.82□□□□□ -0.2
TUBGCP4-201ENST00000260383 HELQQ8TDG4 1101 aa13.82□□□□□ -0.2
TUBGCP4-201ENST00000260383 ZNF778Q96MU6 729 aa13.82□□□□□ -0.2
TUBGCP4-201ENST00000260383 BIRC8Q96P09 236 aa13.82□□□□□ -0.2
TUBGCP4-201ENST00000260383 AGAP3Q96P47 875 aa13.82□□□□□ -0.2
TUBGCP4-201ENST00000260383 PLLPQ9Y342 182 aa13.82□□□□□ -0.2
TUBGCP4-201ENST00000260383 ABCA3Q99758 1704 aa13.82□□□□□ -0.2
TUBGCP4-201ENST00000260383 SHANK3Q9BYB0 1731 aa13.82□□□□□ -0.2
TUBGCP4-201ENST00000260383 GOLGA8IPA6NC78 632 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 GOLGA8JA6NMD2 632 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 TRIM49D1C9J1S8 452 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 MEIS2O14770 477 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 CHMP2AO43633 222 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 LYPLA1O75608 230 aaPredicted RBP13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 TMEM63AO94886 807 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 KRT5P13647 590 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 MSX2P35548 267 aaPredicted RBP13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 CREB5Q02930 508 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 BCL2A1Q16548 175 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 SYCP2LQ5T4T6 812 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 ATG16L1Q676U5 607 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 OGFOD2Q6N063 350 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 DCDC5Q6ZRR9 648 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 RSPH3Q86UC2 560 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 SLC9A9Q8IVB4 645 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 CCDC33Q8N5R6 958 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 TFB1MQ8WVM0 346 aaKnown RBP13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 CRYGNQ8WXF5 182 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 SNX27Q96L92 541 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 COPS7BQ9H9Q2 264 aaPredicted RBP13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 PRDM11Q9NQV5 511 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 SIRPGQ9P1W8 387 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 EBF1Q9UH73 591 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 HERC5Q9UII4 1024 aaKnown RBP13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 TSC22D4Q9Y3Q8 395 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 ASTN2O75129 1339 aaPredicted RBP13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 TCRBV9S1A1TA0A576 114 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms