RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 EURLQ9NYK6 297 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 C6orf203Q9P0P8 240 aaPredicted RBP10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 RABGEF1Q9UJ41 708 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 PACSIN3Q9UKS6 424 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 SNX9Q9Y5X1 595 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 USP32Q8NFA0 1604 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 TAL1P17542 331 aaPredicted RBP10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 AP3M2P53677 418 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 TPI1P60174 286 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 NR1D2Q14995 579 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 PDK3Q15120 406 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 SGSM1Q2NKQ1 1148 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 TWF2Q6IBS0 349 aaKnown RBP10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 ABI1Q8IZP0 508 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 TDRD5Q8NAT2 981 aaKnown RBP10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 LRRC39Q96DD0 335 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 HOXC10Q9NYD6 342 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 NINJ2Q9NZG7 142 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 NYAP2Q9P242 653 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 A0A0A6YYK5 440 aaPredicted RBP10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 PDZK1P1A8MUH7 402 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 P4HA2O15460 535 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 RALBP11234 206 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 MMRN1Q13201 1228 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 TAF5Q15542 800 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 SEL1L3Q68CR1 1132 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 EFCAB3Q8N7B9 438 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 GLIS3Q8NEA6 775 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 RMDN1Q96DB5 314 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 PLEKHG4BQ96PX9 1271 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 CEP44Q9C0F1 390 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 DIABLOQ9NR28 239 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 SPATA2Q9UM82 520 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 TBX20Q9UMR3 447 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 COMMD3-BMI1R4GMX3 469 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 F8W8V4 182 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 TM9SF1O15321 606 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 MYO1DO94832 1006 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 STAT5BP51692 787 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 MTTPP55157 894 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 IL5RAQ01344 420 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 DENND5BQ6ZUT9 1274 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 TARS2Q9BW92 718 aaKnown RBP10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 DGCR6LQ9BY27 220 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 ATXN10Q9UBB4 475 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 CHKBQ9Y259 395 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 FRMPD1Q5SYB0 1578 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 CLTCQ00610 1675 aaKnown RBP10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 CLOCKO15516 846 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 RPA3P35244 121 aaPredicted RBP10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 CACNB2Q08289 660 aaPredicted RBP10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 CNGA2Q16280 664 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 TTC30BQ8N4P2 665 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 SHCBP1Q8NEM2 672 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 TIPINQ9BVW5 301 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 ZNF180Q9UJW8 692 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 RUVBL2Q9Y230 463 aaKnown RBP10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 SMIM22K7EJ46 135 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 EPHB6O15197 1021 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 IMPDH2P12268 514 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 ADRA1DP25100 572 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 PKNOX1P55347 436 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 CDK16Q00536 496 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 MTFR1Q15390 333 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 ERMARDQ5T6L9 678 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 RNF19BQ6ZMZ0 732 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 SAPCD2Q86UD0 394 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 NT5DC3Q86UY8 548 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 KYQ8NBH2 561 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 RDM1Q8NG50 284 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 GIPC3Q8TF64 312 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 EZH1Q92800 747 aaPredicted RBP10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 PNMA5Q96PV4 448 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 RSAD1Q9HA92 442 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 IMPAD1Q9NX62 359 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 TCHHQ07283 1943 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 SLC26A4O43511 780 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 PSTPIP1O43586 416 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 PRKCEQ02156 737 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 MTMR2Q13614 643 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 RGS21Q2M5E4 152 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 SH3RF1Q7Z6J0 888 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 ZNF554Q86TJ5 538 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 CROCCP3Q8IVE0 287 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 ST13P5Q8NFI4 369 aaPredicted RBP10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 TNIP2Q8NFZ5 429 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 TRIM63Q969Q1 353 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 MCRS1Q96EZ8 462 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 CACNA2D2Q9NY47 1150 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 WDR35Q9P2L0 1181 aa10.07□□□□□ -0.8
CTDSPL2-201ENST00000260327 PTGES3LE9PB15 166 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 DDX3XO00571 662 aaKnown RBP eCLIP10.06□□□□□ -0.87e-11■□□□□ 10.9
CTDSPL2-201ENST00000260327 IL12RB1P42701 662 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 ITPK1Q13572 414 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 EMC2Q15006 297 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 TMEM63BQ5T3F8 832 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 SP8Q8IXZ3 490 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 HES6Q96HZ4 224 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 DEPDC7Q96QD5 511 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 ACAD9Q9H845 621 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms