RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 MARK4Q96L34 752 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 CDRT15Q96T59 188 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 TRPC5Q9UL62 973 aaPredicted RBP12.8□□□□□ -0.36
USP30-201ENST00000257548 SHOC2Q9UQ13 582 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 UBR2Q8IWV8 1755 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 SHANK3Q9BYB0 1731 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 ALOX15BO15296 676 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 PSTPIP1O43586 416 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 TM7SF2O76062 418 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 FGFR1P11362 822 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 UQCRBP14927 111 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 DSG3P32926 999 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 SHMT1P34896 483 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 RHBDL3P58872 404 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 MAMLD1Q13495 774 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 C6orf52Q5T4I8 152 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 AMIGO2Q86SJ2 522 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 SLC26A11Q86WA9 606 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 C7orf43Q8WVR3 580 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 DGCR14Q96DF8 476 aaKnown RBP12.8□□□□□ -0.36
USP30-201ENST00000257548 KCNK16Q96T55 309 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 CYLDQ9NQC7 956 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 NOCTQ9UK39 431 aaKnown RBP12.8□□□□□ -0.36
USP30-201ENST00000257548 AGO2Q9UKV8 859 aaKnown RBP12.8□□□□□ -0.36
USP30-201ENST00000257548 TBX20Q9UMR3 447 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 V9GYQ6 96 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 ITGB4P16144 1822 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 FOXD2O60548 495 aaPredicted RBP12.79□□□□□ -0.36
USP30-201ENST00000257548 CYP3A4P08684 503 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 ETFBP38117 255 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 ALDH1A3P47895 512 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 GDF10P55107 478 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 NET1Q7Z628 596 aaPredicted RBP12.79□□□□□ -0.36
USP30-201ENST00000257548 IFNEQ86WN2 208 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 UNC45BQ8IWX7 931 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 ADAM32Q8TC27 787 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 ACER1Q8TDN7 264 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 DCAF4Q8WV16 495 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 HSD17B14Q9BPX1 270 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 GPR88Q9GZN0 384 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 IL1RL2Q9HB29 575 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 IL1RAPL1Q9NZN1 696 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 USP21Q9UK80 565 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 RBMX2Q9Y388 322 aaKnown RBP12.79□□□□□ -0.36
USP30-201ENST00000257548 C4AP0C0L4 1744 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 C4BP0C0L5 1744 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 RPL5P46777 297 aaKnown RBP12.79□□□□□ -0.36
USP30-201ENST00000257548 NPTX2P47972 431 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 PRPSAP1Q14558 356 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 MSS51Q4VC12 460 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 FSCBQ5H9T9 825 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 HYIQ5T013 277 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 FOXB2Q5VYV0 432 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 PDPK2PQ6A1A2 396 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 CYP2R1Q6VVX0 501 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 TMEM179Q6ZVK1 233 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 CLVS1Q8IUQ0 354 aaPredicted RBP12.79□□□□□ -0.36
USP30-201ENST00000257548 TTC13Q8NBP0 860 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 PSPC1Q8WXF1 523 aaKnown RBP12.79□□□□□ -0.36
USP30-201ENST00000257548 ADPGKQ9BRR6 497 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 RNPEPQ9H4A4 650 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 PCDH9Q9HC56 1237 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.79□□□□□ -0.36
USP30-201ENST00000257548 MYH3P11055 1940 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 TCRBV7S3A2A0A539 114 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 DDTLA6NHG4 134 aaPredicted RBP12.79□□□□□ -0.36
USP30-201ENST00000257548 KLHL2O95198 593 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 PSMC3P17980 439 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 CRKP46108 304 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 TMEM63BQ5T3F8 832 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 SGF29Q96ES7 293 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 FERMT1Q9BQL6 677 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 TARS2Q9BW92 718 aaKnown RBP12.79□□□□□ -0.36
USP30-201ENST00000257548 RAVER2Q9HCJ3 691 aaKnown RBP12.79□□□□□ -0.36
USP30-201ENST00000257548 WRAP73Q9P2S5 460 aaPredicted RBP12.79□□□□□ -0.36
USP30-201ENST00000257548 MYH1P12882 1939 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 MYH4Q9Y623 1939 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 LRP6O75581 1613 aa12.79□□□□□ -0.36
USP30-201ENST00000257548 KRT7P08729 469 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 IVDP26440 423 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 RGS7P49802 495 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 NAA20P61599 178 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 SLC27A3Q5K4L6 730 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 LDHDQ86WU2 507 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 FAM156AQ8NDB6 213 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 S100A14Q9HCY8 104 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 ZNF180Q9UJW8 692 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 AKAP10O43572 662 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 EDIL3O43854 480 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 CALB1P05937 261 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 TFE3P19532 575 aaPredicted RBP12.78□□□□□ -0.36
USP30-201ENST00000257548 GLRBP48167 497 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 RARRES1P49788 294 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 PLOD1Q02809 727 aaPredicted RBP12.78□□□□□ -0.36
USP30-201ENST00000257548 SIX1Q15475 284 aaPredicted RBP12.78□□□□□ -0.36
USP30-201ENST00000257548 N4BP2L1Q5TBK1 243 aaPredicted RBP12.78□□□□□ -0.36
USP30-201ENST00000257548 EEPD1Q7L9B9 569 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 ALLCQ8N6M5 410 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 HEXIM2Q96MH2 286 aaKnown RBP12.78□□□□□ -0.36
USP30-201ENST00000257548 ACSS3Q9H6R3 686 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms