RNA–Protein interactions for RNA: ENST00000238633.6

NPC2-201, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene NPC2, Length 796 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-201ENST00000238633 PCSK4Q6UW60 755 aa9.98□□□□□ -0.81
NPC2-201ENST00000238633 CRELD2Q6UXH1 353 aaPredicted RBP9.98□□□□□ -0.81
NPC2-201ENST00000238633 SCN4BQ8IWT1 228 aa9.98□□□□□ -0.81
NPC2-201ENST00000238633 KIAA1958Q8N8K9 716 aa9.98□□□□□ -0.81
NPC2-201ENST00000238633 SYT2Q8N9I0 419 aaPredicted RBP9.98□□□□□ -0.81
NPC2-201ENST00000238633 PIP4K2CQ8TBX8 421 aa9.98□□□□□ -0.81
NPC2-201ENST00000238633 FIZ1Q96SL8 496 aa9.98□□□□□ -0.81
NPC2-201ENST00000238633 ASB7Q9H672 318 aa9.98□□□□□ -0.81
NPC2-201ENST00000238633 SMPD4Q9NXE4 827 aa9.98□□□□□ -0.81
NPC2-201ENST00000238633 DDX43Q9NXZ2 648 aaKnown RBP9.98□□□□□ -0.81
NPC2-201ENST00000238633 CFAP97Q9P2B7 532 aa9.98□□□□□ -0.81
NPC2-201ENST00000238633 FNDC3AQ9Y2H6 1198 aaKnown RBP9.98□□□□□ -0.81
NPC2-201ENST00000238633 CPQQ9Y646 472 aa9.98□□□□□ -0.81
NPC2-201ENST00000238633 HELZP42694 1942 aaKnown RBP9.97□□□□□ -0.81
NPC2-201ENST00000238633 PLXND1Q9Y4D7 1925 aa9.97□□□□□ -0.81
NPC2-201ENST00000238633 TBC1D3BA6NDS4 549 aa9.97□□□□□ -0.81
NPC2-201ENST00000238633 MAGEA11P43364 429 aa9.97□□□□□ -0.81
NPC2-201ENST00000238633 SV2CQ496J9 727 aa9.97□□□□□ -0.81
NPC2-201ENST00000238633 HYIQ5T013 277 aa9.97□□□□□ -0.81
NPC2-201ENST00000238633 KRT79Q5XKE5 535 aa9.97□□□□□ -0.81
NPC2-201ENST00000238633 EGFLAMQ63HQ2 1017 aa9.97□□□□□ -0.81
NPC2-201ENST00000238633 FAM171BQ6P995 826 aa9.97□□□□□ -0.81
NPC2-201ENST00000238633 CENPQQ7L2Z9 268 aaPredicted RBP9.97□□□□□ -0.81
NPC2-201ENST00000238633 ZNF513Q8N8E2 541 aaPredicted RBP9.97□□□□□ -0.81
NPC2-201ENST00000238633 NAT16Q8N8M0 369 aa9.97□□□□□ -0.81
NPC2-201ENST00000238633 FSIP1Q8NA03 581 aa9.97□□□□□ -0.81
NPC2-201ENST00000238633 SETD7Q8WTS6 366 aaKnown RBP9.97□□□□□ -0.81
NPC2-201ENST00000238633 DNASE2BQ8WZ79 361 aa9.97□□□□□ -0.81
NPC2-201ENST00000238633 WBP2Q969T9 261 aa9.97□□□□□ -0.81
NPC2-201ENST00000238633 ZFRQ96KR1 1074 aaKnown RBP9.97□□□□□ -0.81
NPC2-201ENST00000238633 SPATA17Q96L03 361 aa9.97□□□□□ -0.81
NPC2-201ENST00000238633 PLIN2Q99541 437 aa9.97□□□□□ -0.81
NPC2-201ENST00000238633 KRTAP3-3Q9BYR6 98 aa9.97□□□□□ -0.81
NPC2-201ENST00000238633 KRTAP3-2Q9BYR7 98 aa9.97□□□□□ -0.81
NPC2-201ENST00000238633 FOXP1Q9H334 677 aaPredicted RBP9.97□□□□□ -0.81
NPC2-201ENST00000238633 FAM124BQ9H5Z6 455 aaPredicted RBP9.97□□□□□ -0.81
NPC2-201ENST00000238633 PRDM16Q9HAZ2 1276 aa9.97□□□□□ -0.81
NPC2-201ENST00000238633 KCNG1Q9UIX4 513 aa9.97□□□□□ -0.81
NPC2-201ENST00000238633 BTBD3Q9Y2F9 522 aa9.97□□□□□ -0.81
NPC2-201ENST00000238633 PCDHB6Q9Y5E3 794 aa9.97□□□□□ -0.81
NPC2-201ENST00000238633 STYXL1Q9Y6J8 313 aa9.97□□□□□ -0.81
NPC2-201ENST00000238633 PTPRBP23467 1997 aa9.96□□□□□ -0.81
NPC2-201ENST00000238633 TULP1O00294 542 aaPredicted RBP9.96□□□□□ -0.82
NPC2-201ENST00000238633 GABRDO14764 452 aa9.96□□□□□ -0.82
NPC2-201ENST00000238633 CILPO75339 1184 aa9.96□□□□□ -0.82
NPC2-201ENST00000238633 TULP3O75386 442 aa9.96□□□□□ -0.82
NPC2-201ENST00000238633 ADH1CP00326 375 aa9.96□□□□□ -0.82
NPC2-201ENST00000238633 OAS1P00973 400 aaKnown RBP9.96□□□□□ -0.82
NPC2-201ENST00000238633 PLA2G4BP0C869 781 aa9.96□□□□□ -0.82
NPC2-201ENST00000238633 HOXB2P14652 356 aa9.96□□□□□ -0.82
NPC2-201ENST00000238633 PFKLP17858 780 aa9.96□□□□□ -0.82
NPC2-201ENST00000238633 ADSSP30520 456 aa9.96□□□□□ -0.82
NPC2-201ENST00000238633 NTSR1P30989 418 aa9.96□□□□□ -0.82
NPC2-201ENST00000238633 ABCG1P45844 678 aa9.96□□□□□ -0.82
NPC2-201ENST00000238633 TRAPPC10P48553 1259 aa9.96□□□□□ -0.82
NPC2-201ENST00000238633 ZRSR1Q15695 479 aaKnown RBP9.96□□□□□ -0.82
NPC2-201ENST00000238633 SMAD1Q15797 465 aaKnown RBP9.96□□□□□ -0.82
NPC2-201ENST00000238633 LIMS2Q7Z4I7 341 aa9.96□□□□□ -0.82
NPC2-201ENST00000238633 ZNF605Q86T29 641 aa9.96□□□□□ -0.82
NPC2-201ENST00000238633 RGL4Q8IZJ4 473 aa9.96□□□□□ -0.82
NPC2-201ENST00000238633 C1orf127Q8N9H9 656 aa9.96□□□□□ -0.82
NPC2-201ENST00000238633 ZSWIM2Q8NEG5 633 aa9.96□□□□□ -0.82
NPC2-201ENST00000238633 C1orf216Q8TAB5 229 aa9.96□□□□□ -0.82
NPC2-201ENST00000238633 IPO4Q8TEX9 1081 aaKnown RBP9.96□□□□□ -0.82
NPC2-201ENST00000238633 FUBP3Q96I24 572 aaKnown RBP eCLIP9.96□□□□□ -0.82
NPC2-201ENST00000238633 REEP2Q9BRK0 252 aa9.96□□□□□ -0.82
NPC2-201ENST00000238633 TTLL2Q9BWV7 592 aa9.96□□□□□ -0.82
NPC2-201ENST00000238633 TRIM9Q9C026 710 aa9.96□□□□□ -0.82
NPC2-201ENST00000238633 ZDHHC5Q9C0B5 715 aa9.96□□□□□ -0.82
NPC2-201ENST00000238633 GAREM1Q9H706 876 aa9.96□□□□□ -0.82
NPC2-201ENST00000238633 NPDC1Q9NQX5 325 aaPredicted RBP9.96□□□□□ -0.82
NPC2-201ENST00000238633 TMEM30AQ9NV96 361 aa9.96□□□□□ -0.82
NPC2-201ENST00000238633 TRPM5Q9NZQ8 1165 aa9.96□□□□□ -0.82
NPC2-201ENST00000238633 STARD13Q9Y3M8 1113 aa9.96□□□□□ -0.82
NPC2-201ENST00000238633 PTPN13Q12923 2485 aa9.96□□□□□ -0.82
NPC2-201ENST00000238633 KNTC1P50748 2209 aa9.95□□□□□ -0.82
NPC2-201ENST00000238633 GOLGA8CPA6NN73 597 aa9.95□□□□□ -0.82
NPC2-201ENST00000238633 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.95□□□□□ -0.82
NPC2-201ENST00000238633 H0YCG3 227 aa9.95□□□□□ -0.82
NPC2-201ENST00000238633 SLC9A3R1O14745 358 aaPredicted RBP9.95□□□□□ -0.82
NPC2-201ENST00000238633 HOXC11O43248 304 aaPredicted RBP9.95□□□□□ -0.82
NPC2-201ENST00000238633 TLX3O43711 291 aaPredicted RBP9.95□□□□□ -0.82
NPC2-201ENST00000238633 ZNF217O75362 1048 aa9.95□□□□□ -0.82
NPC2-201ENST00000238633 ZNF883P0CG24 379 aa9.95□□□□□ -0.82
NPC2-201ENST00000238633 LMO2P25791 158 aa9.95□□□□□ -0.82
NPC2-201ENST00000238633 POLR2BP30876 1174 aaKnown RBP9.95□□□□□ -0.82
NPC2-201ENST00000238633 PDE6CP51160 858 aa9.95□□□□□ -0.82
NPC2-201ENST00000238633 ZNF131P52739 623 aa9.95□□□□□ -0.82
NPC2-201ENST00000238633 GTF2BQ00403 316 aa9.95□□□□□ -0.82
NPC2-201ENST00000238633 MYO1EQ12965 1108 aa9.95□□□□□ -0.82
NPC2-201ENST00000238633 PTPRNQ16849 979 aa9.95□□□□□ -0.82
NPC2-201ENST00000238633 SOWAHAQ2M3V2 549 aa9.95□□□□□ -0.82
NPC2-201ENST00000238633 HLA-BQ31612 363 aa9.95□□□□□ -0.82
NPC2-201ENST00000238633 C10orf76Q5T2E6 689 aa9.95□□□□□ -0.82
NPC2-201ENST00000238633 SYCP2LQ5T4T6 812 aa9.95□□□□□ -0.82
NPC2-201ENST00000238633 ADALQ6DHV7 355 aa9.95□□□□□ -0.82
NPC2-201ENST00000238633 TMEM25Q86YD3 366 aa9.95□□□□□ -0.82
NPC2-201ENST00000238633 SPATA2LQ8IUW3 424 aaPredicted RBP9.95□□□□□ -0.82
NPC2-201ENST00000238633 ZCCHC9Q8N567 271 aaKnown RBP9.95□□□□□ -0.82
NPC2-201ENST00000238633 TERB1Q8NA31 727 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms