RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Cdc40Q9DC48 579 aaKnown RBP9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Lgr5Q9Z1P4 907 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 AoahO35298 574 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 CluQ06890 448 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Faf2Q3TDN2 445 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Kctd21Q3URF8 260 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Fbxo39Q5NBU5 443 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Atp13a3Q5XF89 1219 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Gja6Q6S5G4 283 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Sema3dQ8BH34 777 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Znf879Q8BI99 563 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Alg9Q8VDI9 611 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Dpp3Q99KK7 738 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Bap1Q99PU7 728 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Lrrc71Q9D3W5 558 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 C5P06684 1680 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Fam171a1A2ATK9 892 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Gm3173A6NAS3 172 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Gm3020E9Q3J7 150 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Atf6F6VAN0 656 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 E230025N22RikG5E8S3 482 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Gm2897K7N6T7 172 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Sar1aP36536 198 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Ptgs2Q05769 604 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 N6amt1Q6SKR2 214 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Gm3411Q8C7R2 150 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Kat5Q8CHK4 513 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Slc39a3Q99K24 317 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Mov10l1Q99MV5 1187 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Pla2g12bQ99P27 195 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 PmpcbQ9CXT8 489 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Phf2Q9WTU0 1096 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Gm5415E9PXF3 478 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Stam2O88811 523 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Rb1P13405 921 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Arid5aQ3U108 590 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Rbbp4Q60972 425 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 CybbQ61093 570 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 E2f5Q61502 335 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 MsraQ9D6Y7 233 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Inpp4aQ9EPW0 939 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Krt6bQ9Z331 562 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Adgra3Q7TT36 1310 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Mmp13P33435 472 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 TfamP40630 243 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Ttc39dQ0VF76 604 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Khdrbs1Q60749 443 aaKnown RBP9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Casc4Q6P2L7 435 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Trim62Q80V85 475 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Srrm3Q80WV7 648 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Ric8bQ80XE1 520 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Ap3m2Q8R2R9 418 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Txndc12Q9CQU0 170 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Olfr711Q9EPG2 314 aa9.54□□□□□ -0.88
Scn8a-213ENSMUST00000201549 SynrgQ5SV85 1306 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Gm5737A0A140LI11 423 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Grk4O70291 574 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 PigrO70570 771 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Bcat1P24288 386 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Ccng1P51945 294 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 NfibP97863 570 aaKnown RBP9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Muc3aQ3U5A2 218 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Xlr3aQ60595 226 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Suz12Q80U70 741 aaKnown RBP9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Phf20Q8BLG0 1010 aaKnown RBP9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Rps6kc1Q8BLK9 1056 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Adamts2Q8C9W3 1213 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Map3k21Q8VDG6 1002 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Rgs10Q9CQE5 181 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 GOLGA7BQ9D428 167 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Tjp3Q9QXY1 905 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Ifi202Q9R002 445 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Myh3P13541 1940 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Gm21497A0A087WRK3 222 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Efna5O08543 228 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 PtpaP58389 323 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Samd11Q1RNF8 542 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Kctd8Q50H33 476 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Ttc29Q80VM3 471 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Shisa4Q8CA71 197 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 HpdlQ8K248 371 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Ubxn11Q9D572 484 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Grk1Q9WVL4 564 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 N4bp2F8VQG7 1678 aaKnown RBP9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Serpinb9O08797 374 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 ChrngP04760 519 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Rrm1P07742 792 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 CcnoP0C242 352 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Sstr1P30873 391 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Hspa8P63017 646 aaKnown RBP9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Ccdc127Q3TC33 260 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 CcnjlQ5SRT8 387 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 C8aQ8K182 587 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Fis1Q9CQ92 152 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 CrotQ9DC50 612 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Cyp4f14Q9EP75 524 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Atp13a1Q9EPE9 1200 aaKnown RBP9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Usp29Q9ES63 869 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Zbtb18Q9WUK6 522 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Myh10Q61879 1976 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms