RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Gja1P23242 382 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Rpn2Q9DBG6 631 aaKnown RBP16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Ccndbp1Q3TVC7 356 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Gpr162Q3UN16 588 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Olfr295Q7TS08 309 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Sept9Q80UG5 583 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Uba3Q8C878 462 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Cadm1Q8R5M8 456 aaKnown RBP16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Pwp1Q99LL5 501 aaKnown RBP16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Eya4Q9Z191 616 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Ptch1Q61115 1434 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Slc27a6E9Q9W4 619 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 RadilQ69Z89 1099 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Tmc7Q8C428 726 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Fam20bQ8VCS3 409 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Olfr1494Q8VGP8 315 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Efcab6Q6P1E8 1516 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 AspgA0JNU3 564 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 DgkaO88673 730 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 DbtP53395 482 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Serpina3mQ03734 418 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Klra7Q60654 280 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Dpp9Q8BVG4 862 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Mrpl1Q99N96 336 aaKnown RBP16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Uchl3Q9JKB1 230 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Orc6Q9WUJ8 262 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Tmem132bF7BAB2 1078 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Crabp2P22935 138 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Zbtb33Q8BN78 671 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Ifi44Q8BV66 422 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Akr1c20Q8VC77 323 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Fam32aQ9CR80 112 aaKnown RBP16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Rpap3Q9D706 660 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 IscuQ9D7P6 168 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Pidd1Q9ERV7 915 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Clasp1Q80TV8 1535 aaKnown RBP16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Ttll10A4Q9F3 704 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Ccdc8D3YZV8 685 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 BrafP28028 804 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Ddx3xQ62167 662 aaKnown RBP16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Adamts2Q8C9W3 1213 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Fam45aQ9D8N2 357 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Mrps31Q61733 384 aaKnown RBP16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Ticam2Q8BJQ4 232 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Abcf3Q8K268 709 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Tlcd1Q99JT6 247 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Plcg1Q62077 1302 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 CrymO54983 313 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 ZfrO88532 1074 aaKnown RBP16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Grm1P97772 1199 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Phactr1Q2M3X8 580 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Trmt1Q3TX08 663 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Smyd5Q3TYX3 416 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 TsnQ62348 228 aaKnown RBP16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Serpina16D3Z660 418 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Dnal1Q05A62 190 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Eif3lQ8QZY1 564 aaKnown RBP16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 McamQ8R2Y2 648 aaKnown RBP16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Olfr1467Q8VFW1 308 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Gm1758F6VZZ1 202 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 StamP70297 548 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Rell1Q8K2J7 272 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Wdr12Q9JJA4 423 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 H2afxP27661 143 aaKnown RBP16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Sar1aP36536 198 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 PhgdhQ61753 533 aaKnown RBP16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Ces5aQ6AW46 575 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Znf513Q6PD29 541 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Myl12aQ6ZWQ9 172 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Pdk1Q8BFP9 434 aaKnown RBP16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Epb41l5Q8BGS1 731 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Pnma3Q8JZW8 466 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 InvsO89019 1062 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Lrrc27Q80YS5 523 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Noc4lQ8BHY2 516 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Arhgap22Q8BL80 702 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Cdc73Q8JZM7 531 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Ferd3lQ923Z4 168 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Zmym2Q9CU65 1376 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Gucy1a2F8VQK3 730 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Bnc1O35914 961 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 AurkcO88445 282 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Fgd3O88842 733 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Hsd17b1P51656 344 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Ephb2P54763 986 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Rbm44Q3V089 1013 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Lrrn2Q6PHP6 730 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Kdm4bQ91VY5 1086 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Hspa12bQ9CZJ2 685 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Tbx18Q9EPZ6 613 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Ap4s1Q9WVL1 144 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Racgap1Q9WVM1 628 aa16.17■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Gm8113E0CXS8 587 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Stx4P70452 298 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Ptprn2P80560 1001 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Zhx2Q8C0C0 836 aaKnown RBP16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Fam20aQ8CID3 541 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 CerkQ8K4Q7 531 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Mtmr6Q8VE11 617 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Pdk2Q9JK42 407 aa16.16■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms