RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 Golga1Q9CW79 758 aa8.16□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Fam114a1Q9D281 569 aa8.16□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Rin2Q9D684 903 aa8.16□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 TheglQ9DA15 459 aa8.16□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Tsc1Q9EP53 1161 aa8.16□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Rnf14Q9JI90 485 aa8.16□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Klrc2Q9WTJ9 238 aa8.16□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Nme3Q9WV85 169 aa8.16□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Cntnap5aQ0V8T9 1304 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Gm4756A0A140LIS8 335 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Rnf19bA2A7Q9 732 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 LgmnO89017 435 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Fgfr1P16092 822 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Eno1P17182 434 aaKnown RBP8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 PrkchP23298 683 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Ercc5P35689 1170 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Gdf6P43028 454 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Mc4rP56450 332 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Aarsd1Q3THG9 412 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Skap1Q3UUV5 355 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Papss1Q60967 624 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Zdhhc24Q6IR37 284 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Atl2Q6PA06 583 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Cd300aQ6SJQ0 318 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Best2Q8BGM5 508 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Ints9Q8K114 658 aaKnown RBP8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Sbk1Q8QZX0 417 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Ddit4Q9D3F7 229 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Ccdc83Q9D4V3 305 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Tmem86aQ9D8N3 241 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 PnkpQ9JLV6 522 aaKnown RBP8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Mta2Q9R190 668 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Pck1Q9Z2V4 622 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Cacna1fQ9JIS7 1985 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Gm10720D3Z1I5 223 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Kcnk16G5E845 292 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Atp2a2O55143 1044 aaKnown RBP8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Ppargc1aO70343 797 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 VdrP48281 422 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 YwhahP68510 246 aaKnown RBP8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Fbxw2Q60584 422 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Spa17Q62252 149 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 RetsatQ64FW2 609 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 DstykQ6XUX1 927 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Mib1Q80SY4 1006 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Zfp454Q80Y34 536 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Chmp2bQ8BJF9 213 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 L3mbtl3Q8BLB7 883 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Fra10ac1Q8BP78 315 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Pyhin1Q8BV49 420 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Glis1Q8K1M4 789 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Thoc1Q8R3N6 657 aaKnown RBP8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Unc45aQ99KD5 944 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Nudt8Q9CR24 210 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Tspan17Q9D7W4 270 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 B4galt4Q9JJ04 344 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Ppp2r3dQ9Z176 491 aa8.15□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Robo3Q9Z2I4 1366 aa8.15□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 JrklB2RRL2 523 aa8.15□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Zfp882E9Q4R4 555 aa8.15□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Vmn2r19G5E8G4 854 aa8.15□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Soat2O88908 525 aa8.15□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 FpgsP48760 587 aa8.15□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Slc11a2P49282 568 aa8.15□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Kcnn2P58390 839 aa8.15□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Stmn4P63042 189 aa8.15□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Lig3P97386 1015 aa8.15□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 VcpQ01853 806 aaKnown RBP8.15□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 ItkQ03526 625 aa8.15□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Plk1Q07832 603 aa8.15□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Ccndbp1Q3TVC7 356 aa8.15□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Nek10Q3UGM2 1111 aa8.15□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Foxred2Q3USW5 665 aa8.15□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Cpa4Q6P8K8 420 aa8.15□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Cplx4Q80WM3 160 aa8.15□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Metap1Q8BP48 386 aaKnown RBP8.15□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Sik2Q8CFH6 931 aa8.15□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 LgsnQ8CIX8 563 aa8.15□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Vmn1r213Q8R278 384 aa8.15□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Q9CQC3 228 aa8.15□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Psma8Q9CWH6 250 aa8.15□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 VasnQ9CZT5 673 aa8.15□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 EcsitQ9QZH6 435 aa8.15□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Rhox3fA2ANE1 215 aa8.14□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Gm5689F6Y2A6 97 aa8.14□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Zfp850J3QPC5 689 aa8.14□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Ptp4a2O70274 167 aa8.14□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Il27raO70394 623 aa8.14□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Nr3c1P06537 783 aa8.14□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Hspa9P38647 679 aaKnown RBP8.14□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Pon1P52430 355 aa8.14□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Gm14685Q52KH6 695 aa8.14□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Sco1Q5SUC9 284 aa8.14□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Akap7Q7TN79 314 aa8.14□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Fbxw21Q8BI38 468 aa8.14□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Trub1Q8C0D0 338 aaKnown RBP8.14□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Colgalt1Q8K297 617 aa8.14□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Prpf39Q8K2Z2 665 aa8.14□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Vmn1r64Q8R2B8 320 aa8.14□□□□□ -1.11
Ccdc39-201ENSMUST00000029222 Afg3l1Q920A7 789 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms