RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Ap2b1Q9DBG3 937 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ptpn11P35235 597 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ripk2P58801 539 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Arl4cP61208 192 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Tmem26Q3UP23 366 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Trim35Q8C006 501 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Il17cQ8K4C5 194 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ndufa13Q9ERS2 144 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 BcorQ8CGN4 1759 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Zfp457L7N1X4 647 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Gm3264L7N2C5 238 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Il2P04351 169 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Rpl7aP12970 266 aaKnown RBP11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Stmn1P54227 149 aaKnown RBP11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Kcnn2P58390 839 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 SnrpfP62307 86 aaKnown RBP11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Fam107aQ78TU8 144 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Best2Q8BGM5 508 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Epn2Q8CHU3 595 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Psip1Q99JF8 528 aaKnown RBP11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Psmd6Q99JI4 389 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Cpne8Q9DC53 577 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Erich2E9Q1A6 463 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Dhx15O35286 795 aaKnown RBP11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Rtn2O70622 471 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 KitP05532 979 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 PdgfaP20033 211 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ces1cP23953 554 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Myl2P51667 166 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Slc1a1P51906 523 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Sox8Q04886 464 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Bpifb5Q3UQ05 490 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ptk6Q64434 451 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Entpd3Q8BFW6 529 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Med21Q9CQ39 144 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Rnf25Q9QZR0 456 aa11.29□□□□□ -0.6
Msh3-201ENSMUST00000022220 Myh6Q02566 1938 aaKnown RBP11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 AspgA0JNU3 564 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Trdmt1O55055 415 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Cyp2f2P33267 491 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 4930430A15RikQ05AC5 485 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Atp2a3Q64518 1038 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 RadilQ69Z89 1099 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Utp14bQ6EJB6 756 aaKnown RBP11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 HltfQ6PCN7 1003 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Tmem220Q8BP07 167 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Clasp2Q8BRT1 1286 aaKnown RBP11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 H2-Q4Q8HWB2 354 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Pcdhac2Q91Y09 1006 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Grhl1Q921D9 618 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Cdk5rap3Q99LM2 503 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Rex1bdQ9CYZ6 169 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Trpc4Q9QUQ5 974 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Klrc2Q9WTJ9 238 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Myh15E9Q264 1925 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 2210011C24RikA0A087WQ89 206 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 AlpiF8VPQ6 554 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 AdssP46664 456 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Adamts10P58459 1104 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Fam83hQ148V8 1209 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Olfr8Q60892 310 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Map2k2Q63932 401 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Txndc8Q69AB2 127 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Znf512Q69Z99 562 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Wscd1Q80XH4 572 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Vmn2r43Q80Z08 845 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Azin2Q8BVM4 459 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 NkrfQ8BY02 690 aaKnown RBP11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Mill1Q8HWE7 395 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 UvragQ8K245 698 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Cyp2c50Q91X77 490 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 SncaipQ99ME3 962 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Atp6v1g1Q9CR51 118 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Sugt1Q9CX34 336 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Dnaaf1Q9D2H9 634 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 1700123K08RikQ9D991 295 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Rab27aQ9ERI2 221 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Astn1Q61137 1302 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Cntnap2Q9CPW0 1332 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Zbed6D2EAC2 980 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Gm8113E0CXS8 587 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Zc3h7aE9PWW6 970 aaKnown RBP11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Gm10250G3X9L6 160 aaKnown RBP11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Barx2O08686 283 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Acot1O55137 419 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ass1P16460 412 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 ItgalP24063 1163 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ano7Q14AT5 859 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Rnf10Q3UIW5 804 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Scube3Q66PY1 993 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ccdc154Q6RUT8 657 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 RubcnQ80U62 956 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Clptm1Q8VBZ3 664 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Syap1Q9D5V6 365 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Mzb1Q9D8I1 188 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 DmgdhQ9DBT9 869 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Atp5hQ9DCX2 161 aa11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Drg2Q9QXB9 364 aaKnown RBP11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 PygmQ9WUB3 842 aaKnown RBP11.28□□□□□ -0.6
Msh3-201ENSMUST00000022220 Tnks1bp1P58871 1720 aa11.28□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms