RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Nyap1Q6PFX7 833 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 Homer3Q99JP6 356 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 Fam227aQ9D3V8 625 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 Ubxn11Q9D572 484 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 Lima1Q9ERG0 753 aaKnown RBP13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 RalbQ9JIW9 206 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 Twf2Q9Z0P5 349 aaKnown RBP13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 Myh6Q02566 1938 aaKnown RBP13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 Fam205a1D3YZF6 1314 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 Gm15448F6PZL4 682 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 Olfr611K7N609 323 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 Olfr612L7N462 323 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 Cyp2b9P12790 491 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 Phactr1Q2M3X8 580 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 Lipo3Q3UT41 399 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 Gm29609Q3UU56 907 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 FcgrtQ61559 365 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 WlsQ6DID7 541 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 HltfQ6PCN7 1003 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 Nemp1Q6ZQE4 437 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 Gtf3c2Q8BL74 907 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 OgtQ8CGY8 1046 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 Mettl16Q9CQG2 553 aaKnown RBP13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 MceeQ9D1I5 178 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 Mageb3Q9D2H4 330 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 Tomm20lQ9D4V6 152 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 Zscan12Q9Z1D7 501 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 Myh7Q91Z83 1935 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 Vmn2r39L7N2E5 861 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 Orai3Q6P8G8 290 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 Rnf168Q80XJ2 565 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 Zfp418Q8BFS8 652 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 Lig4Q8BTF7 911 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 Zfp120Q8BZW4 436 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 C8aQ8K182 587 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 GsdmcQ99NB5 468 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 Ska2Q9CR46 120 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 GOLGA7BQ9D428 167 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 DmgdhQ9DBT9 869 aa13.13□□□□□ -0.31
Msh6-201ENSMUST00000005503 Klhl18A0A0G2JGN5 579 aa13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 Ttc7bE9Q6P5 843 aa13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 Rtn2O70622 471 aa13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 Mtco1P00397 514 aa13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 Flt3Q00342 1000 aa13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 Frmd5Q6P5H6 517 aa13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 Nup93Q8BJ71 819 aaKnown RBP13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 SgczQ8BX51 311 aa13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 Pak5Q8C015 719 aa13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 Rpp40Q8R1F9 363 aa13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 Kat2aQ9JHD2 830 aa13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 Znf354bQ9QXT9 601 aa13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 Tagln3Q9R1Q8 199 aa13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 Clcn3P51791 818 aa13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 Tmem161bQ8C2L6 487 aa13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 Csde1Q91W50 798 aaKnown RBP13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 Gdap2Q9DBL2 498 aa13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 Pcna-ps2A0A140T8V5 261 aa13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 Ccdc8D3YZV8 685 aa13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 Il1rl1P14719 567 aa13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 PcnaP17918 261 aa13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 Ppp3ccP48455 513 aa13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 Ctc1Q5SUQ9 1212 aa13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 Nell2Q61220 819 aa13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 Dcaf15Q6PFH3 600 aa13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 Usp6nlQ80XC3 819 aa13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 Mcoln2Q8K595 566 aa13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 Taf12Q8VE65 161 aa13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 Cpt1bQ924X2 772 aa13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 Grk2Q99MK8 689 aa13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 Prl2b1Q9DAZ2 228 aa13.12□□□□□ -0.31
Msh6-201ENSMUST00000005503 Itgb5O70309 798 aa13.11□□□□□ -0.31
Msh6-201ENSMUST00000005503 Snx3O70492 162 aa13.11□□□□□ -0.31
Msh6-201ENSMUST00000005503 Slc38a5Q3U1J0 479 aa13.11□□□□□ -0.31
Msh6-201ENSMUST00000005503 Grik1Q60934 836 aa13.11□□□□□ -0.31
Msh6-201ENSMUST00000005503 Znf618Q80YY7 953 aaKnown RBP13.11□□□□□ -0.31
Msh6-201ENSMUST00000005503 MtbpQ8BJS8 894 aaKnown RBP13.11□□□□□ -0.31
Msh6-201ENSMUST00000005503 HpdlQ8K248 371 aa13.11□□□□□ -0.31
Msh6-201ENSMUST00000005503 Vmn1r64Q8R2B8 320 aa13.11□□□□□ -0.31
Msh6-201ENSMUST00000005503 Wdr98Q8VC42 657 aa13.11□□□□□ -0.31
Msh6-201ENSMUST00000005503 CrotQ9DC50 612 aa13.11□□□□□ -0.31
Msh6-201ENSMUST00000005503 Hey2Q9QUS4 339 aa13.11□□□□□ -0.31
Msh6-201ENSMUST00000005503 Copg2Q9QXK3 871 aa13.11□□□□□ -0.31
Msh6-201ENSMUST00000005503 Klrc1Q9Z202 244 aa13.11□□□□□ -0.31
Msh6-201ENSMUST00000005503 Efcab12V9GXH0 673 aa13.11□□□□□ -0.31
Msh6-201ENSMUST00000005503 Vmn2r15L7N2A0 855 aa13.11□□□□□ -0.31
Msh6-201ENSMUST00000005503 E2f6O54917 272 aa13.11□□□□□ -0.31
Msh6-201ENSMUST00000005503 Pknox1O70477 436 aa13.11□□□□□ -0.31
Msh6-201ENSMUST00000005503 Tp53P02340 387 aa13.11□□□□□ -0.31
Msh6-201ENSMUST00000005503 Krt1P04104 637 aa13.11□□□□□ -0.31
Msh6-201ENSMUST00000005503 Ptpn11P35235 597 aa13.11□□□□□ -0.31
Msh6-201ENSMUST00000005503 StamP70297 548 aa13.11□□□□□ -0.31
Msh6-201ENSMUST00000005503 Agap2Q3UHD9 1186 aa13.11□□□□□ -0.31
Msh6-201ENSMUST00000005503 A1cfQ5YD48 595 aa13.11□□□□□ -0.31
Msh6-201ENSMUST00000005503 Pgrmc2Q80UU9 217 aaKnown RBP13.11□□□□□ -0.31
Msh6-201ENSMUST00000005503 Mgat5Q8R4G6 740 aa13.11□□□□□ -0.31
Msh6-201ENSMUST00000005503 Tbc1d19Q8VDV7 526 aa13.11□□□□□ -0.31
Msh6-201ENSMUST00000005503 Q99KU6 348 aa13.11□□□□□ -0.31
Msh6-201ENSMUST00000005503 Rgs10Q9CQE5 181 aa13.11□□□□□ -0.31
Msh6-201ENSMUST00000005503 1700031M16RikA0A087WSH0 82 aa13.11□□□□□ -0.31
Msh6-201ENSMUST00000005503 Ccdc194A0A140LIT1 234 aa13.11□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms