RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 UBC5P15732 148 aa-3.93□□□□□ -3.04
snR47snR47 GTT1P40582 234 aa-3.93□□□□□ -3.04
snR47snR47 RTR2Q12378 196 aa-3.93□□□□□ -3.04
snR47snR47 YCR095W-AQ3E787 52 aa-3.93□□□□□ -3.04
snR47snR47 SRB6P32570 121 aa-3.94□□□□□ -3.04
snR47snR47 SPC24Q04477 213 aa-3.94□□□□□ -3.04
snR47snR47 VTH1P40438 1549 aa-3.95□□□□□ -3.04
snR47snR47 VTH2P40890 1549 aa-3.95□□□□□ -3.04
snR47snR47 AIM19P40502 157 aa-3.95□□□□□ -3.04
snR47snR47 YLR419WQ06698 1435 aaKnown RBP-3.96□□□□□ -3.04
snR47snR47 APS2Q00381 147 aa-3.97□□□□□ -3.04
snR47snR47 YBL071CP38185 102 aa-3.98□□□□□ -3.05
snR47snR47 CWC21Q03375 135 aaKnown RBP-3.98□□□□□ -3.05
snR47snR47 PAU4P53427 120 aa-3.99□□□□□ -3.05
snR47snR47 YBR032WP38223 100 aa-4.03□□□□□ -3.05
snR47snR47 ATP18P81450 59 aa-4.03□□□□□ -3.05
snR47snR47 SAE3P89114 91 aa-4.03□□□□□ -3.05
snR47snR47 YPR108W-AQ3E7B3 70 aa-4.03□□□□□ -3.05
snR47snR47 TOS6P48560 102 aa-4.04□□□□□ -3.06
snR47snR47 YHR214C-DP0CX93 97 aa-4.05□□□□□ -3.06
snR47snR47 YCR085WP25650 117 aa-4.05□□□□□ -3.06
snR47snR47 Q0144Q9ZZW2 109 aa-4.05□□□□□ -3.06
snR47snR47 VPS51P36116 164 aa-4.06□□□□□ -3.06
snR47snR47 SIP18P50263 79 aa-4.06□□□□□ -3.06
snR47snR47 YNL277W-AQ3E7Z0 62 aa-4.06□□□□□ -3.06
snR47snR47 RBL2P48606 106 aaKnown RBP-4.07□□□□□ -3.06
snR47snR47 TIM11P81449 96 aaPredicted RBP-4.09□□□□□ -3.06
snR47snR47 GIM5Q04493 163 aa-4.09□□□□□ -3.06
snR47snR47 YMR122W-AQ3E842 84 aa-4.09□□□□□ -3.06
snR47snR47 MOT1P32333 1867 aa-4.09□□□□□ -3.06
snR47snR47 BUD23P25627 275 aaPredicted RBP-4.1□□□□□ -3.07
snR47snR47 YBR090CP38253 122 aa-4.1□□□□□ -3.07
snR47snR47 SFT1P43682 97 aa-4.1□□□□□ -3.07
snR47snR47 YOR1P53049 1477 aa-4.11□□□□□ -3.07
snR47snR47 SMD2Q06217 110 aaKnown RBP-4.11□□□□□ -3.07
snR47snR47 YLR365WQ7LIF2 110 aa-4.11□□□□□ -3.07
snR47snR47 PAU5P43575 122 aa-4.12□□□□□ -3.07
snR47snR47 BPT1P14772 1559 aa-4.14□□□□□ -3.07
snR47snR47 LYS2P07702 1392 aa-4.15□□□□□ -3.07
snR47snR47 TY3B-IQ7LHG5 1498 aaKnown RBP-4.16□□□□□ -3.08
snR47snR47 YAL065CO13511 128 aa-4.17□□□□□ -3.08
snR47snR47 GIM4P40005 111 aaKnown RBP-4.17□□□□□ -3.08
snR47snR47 SPC1P46965 94 aa-4.17□□□□□ -3.08
snR47snR47 VMA21P41806 77 aa-4.18□□□□□ -3.08
snR47snR47 EMC5P40540 141 aa-4.19□□□□□ -3.08
snR47snR47 NHP10Q03435 203 aa-4.21□□□□□ -3.08
snR47snR47 YOR289WQ12012 251 aaPredicted RBP-4.21□□□□□ -3.08
snR47snR47 MYO2P19524 1574 aaKnown RBP-4.22□□□□□ -3.08
snR47snR47 BSC4P53841 131 aa-4.23□□□□□ -3.09
snR47snR47 GIM3P53900 129 aa-4.23□□□□□ -3.09
snR47snR47 YAR029WP39549 74 aa-4.26□□□□□ -3.09
snR47snR47 KRE5P22023 1365 aa-4.27□□□□□ -3.09
snR47snR47 RPS20P38701 121 aaKnown RBP-4.27□□□□□ -3.09
snR47snR47 RPB11P38902 120 aa-4.28□□□□□ -3.09
snR47snR47 RPS27AP35997 82 aaKnown RBP-4.3□□□□□ -3.1
snR47snR47 CMC2Q3E7A4 109 aa-4.3□□□□□ -3.1
snR47snR47 YLL006W-AQ3E814 58 aa-4.3□□□□□ -3.1
snR47snR47 ATG38Q05789 226 aaKnown RBP-4.31□□□□□ -3.1
snR47snR47 MRP49P32388 137 aa-4.32□□□□□ -3.1
snR47snR47 SWC7Q06707 132 aa-4.32□□□□□ -3.1
snR47snR47 TLG1Q03322 224 aa-4.33□□□□□ -3.1
snR47snR47 YOL097W-AQ3E7Y9 61 aa-4.33□□□□□ -3.1
snR47snR47 SPC2Q04969 178 aa-4.34□□□□□ -3.1
snR47snR47 YDR029WQ12111 104 aa-4.34□□□□□ -3.1
snR47snR47 OLI1P61829 76 aa-4.35□□□□□ -3.11
snR47snR47 FPR2P32472 135 aa-4.37□□□□□ -3.11
snR47snR47 GNA1P43577 159 aaPredicted RBP-4.37□□□□□ -3.11
snR47snR47 NUM1Q00402 2748 aa-4.38□□□□□ -3.11
snR47snR47 YGL258W-AQ3E740 77 aa-4.39□□□□□ -3.11
snR47snR47 YOS1Q3E834 85 aa-4.39□□□□□ -3.11
snR47snR47 YDR524C-BQ3E6R4 66 aa-4.4□□□□□ -3.11
snR47snR47 YOR343CQ12484 108 aa-4.41□□□□□ -3.12
snR47snR47 YDR119W-AQ2V2P9 66 aa-4.41□□□□□ -3.12
snR47snR47 COA2Q3E823 68 aa-4.41□□□□□ -3.12
snR47snR47 CUP1-1P0CX80 61 aa-4.42□□□□□ -3.12
snR47snR47 CUP1-2P0CX81 61 aa-4.42□□□□□ -3.12
snR47snR47 YDR278CQ05612 105 aa-4.42□□□□□ -3.12
snR47snR47 POC4Q12245 148 aaPredicted RBP-4.42□□□□□ -3.12
snR47snR47 SMC4Q12267 1418 aa-4.42□□□□□ -3.12
snR47snR47 IRC20Q06554 1556 aa-4.44□□□□□ -3.12
snR47snR47 NHP2P32495 156 aaPredicted RBP-4.44□□□□□ -3.12
snR47snR47 NKP2Q06162 153 aa-4.44□□□□□ -3.12
snR47snR47 PAU23Q07987 124 aa-4.44□□□□□ -3.12
snR47snR47 PAU17Q12370 124 aa-4.44□□□□□ -3.12
snR47snR47 YOR072W-BQ3E832 53 aa-4.44□□□□□ -3.12
snR47snR47 YMR103CQ04436 120 aa-4.45□□□□□ -3.12
snR47snR47 RSM19P53733 91 aaPredicted RBP-4.46□□□□□ -3.12
snR47snR47 UBC4P15731 148 aa-4.48□□□□□ -3.13
snR47snR47 LHP1P33399 275 aaKnown RBP-4.48□□□□□ -3.13
snR47snR47 SNU13P39990 126 aaKnown RBP-4.48□□□□□ -3.13
snR47snR47 XRN1P22147 1528 aaKnown RBP-4.48□□□□□ -3.13
snR47snR47 LSM2P38203 95 aaKnown RBP-4.5□□□□□ -3.13
snR47snR47 YHL005CP38752 130 aa-4.5□□□□□ -3.13
snR47snR47 YLR099W-AQ3E798 87 aa-4.5□□□□□ -3.13
snR47snR47 YKL068W-AQ3E826 78 aa-4.5□□□□□ -3.13
snR47snR47 UTP10P42945 1769 aaKnown RBP-4.5□□□□□ -3.13
snR47snR47 FYV7Q12247 151 aa-4.51□□□□□ -3.13
snR47snR47 SCP1Q08873 200 aa-4.55□□□□□ -3.14
snR47snR47 YOR394C-AQ8TGJ0 55 aa-4.55□□□□□ -3.14
snR47snR47 APC1P53886 1748 aa-4.55□□□□□ -3.14
Retrieved 100 of 5,963 RNA–protein pairs in 62.9 ms