RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W YRF1-5P0CX21 1796 aa-0.19□□□□□ -2.44
YOP1YPR028W YRF1-8P0CX22 1796 aa-0.19□□□□□ -2.44
YOP1YPR028W GEA2P39993 1459 aaKnown RBP-0.2□□□□□ -2.44
YOP1YPR028W TOM6P33448 61 aa-0.2□□□□□ -2.44
YOP1YPR028W YBR201C-AQ2V2Q3 67 aa-0.2□□□□□ -2.44
YOP1YPR028W YDR381C-AQ3E6R5 114 aa-0.2□□□□□ -2.44
YOP1YPR028W MDS3P53094 1487 aa-0.21□□□□□ -2.44
YOP1YPR028W BSC4P53841 131 aa-0.21□□□□□ -2.44
YOP1YPR028W REV3P14284 1504 aa-0.22□□□□□ -2.44
YOP1YPR028W RRT15Q3E811 62 aa-0.22□□□□□ -2.44
YOP1YPR028W YCR108CQ3E819 63 aa-0.22□□□□□ -2.44
YOP1YPR028W YHR214C-DP0CX93 97 aa-0.23□□□□□ -2.45
YOP1YPR028W YGR025WP53216 100 aa-0.23□□□□□ -2.45
YOP1YPR028W SDH6Q3E785 79 aa-0.23□□□□□ -2.45
YOP1YPR028W FMP27Q06179 2628 aa-0.24□□□□□ -2.45
YOP1YPR028W YDR029WQ12111 104 aa-0.24□□□□□ -2.45
YOP1YPR028W YMR122W-AQ3E842 84 aa-0.24□□□□□ -2.45
YOP1YPR028W YAL065CO13511 128 aa-0.25□□□□□ -2.45
YOP1YPR028W MSL1P40567 111 aaPredicted RBP-0.25□□□□□ -2.45
YOP1YPR028W ATP18P81450 59 aa-0.25□□□□□ -2.45
YOP1YPR028W SUS1Q6WNK7 96 aa-0.25□□□□□ -2.45
YOP1YPR028W DNF3Q12674 1656 aa-0.26□□□□□ -2.45
YOP1YPR028W FYV7Q12247 151 aa-0.26□□□□□ -2.45
YOP1YPR028W MHF2Q3E829 80 aa-0.26□□□□□ -2.45
YOP1YPR028W EDC1P53080 175 aaPredicted RBP-0.28□□□□□ -2.45
YOP1YPR028W YDR246W-AQ3E763 66 aa-0.28□□□□□ -2.45
YOP1YPR028W ECM12O13529 151 aa-0.29□□□□□ -2.46
YOP1YPR028W FPR2P32472 135 aa-0.29□□□□□ -2.46
YOP1YPR028W NHP2P32495 156 aaPredicted RBP-0.29□□□□□ -2.46
YOP1YPR028W YDR042CQ03205 200 aa-0.29□□□□□ -2.46
YOP1YPR028W GCN1P33892 2672 aaKnown RBP-0.3□□□□□ -2.46
YOP1YPR028W UTP20P35194 2493 aaKnown RBP-0.3□□□□□ -2.46
YOP1YPR028W YCR085WP25650 117 aa-0.3□□□□□ -2.46
YOP1YPR028W YKL068W-AQ3E826 78 aa-0.3□□□□□ -2.46
YOP1YPR028W TY1B-BRQ12193 1756 aa-0.3□□□□□ -2.46
YOP1YPR028W NUM1Q00402 2748 aa-0.3□□□□□ -2.46
YOP1YPR028W TY1B-LR3P0C2I6 1755 aaKnown RBP-0.31□□□□□ -2.46
YOP1YPR028W TY1B-PR3P0C2J1 1755 aaKnown RBP-0.31□□□□□ -2.46
YOP1YPR028W PAU23Q07987 124 aa-0.31□□□□□ -2.46
YOP1YPR028W PAU17Q12370 124 aa-0.31□□□□□ -2.46
YOP1YPR028W YPR108W-AQ3E7B3 70 aa-0.31□□□□□ -2.46
YOP1YPR028W POL1P13382 1468 aa-0.31□□□□□ -2.46
YOP1YPR028W HKR1P41809 1802 aa-0.31□□□□□ -2.46
YOP1YPR028W YBL044WP38194 122 aa-0.32□□□□□ -2.46
YOP1YPR028W YBR032WP38223 100 aa-0.32□□□□□ -2.46
YOP1YPR028W SEN1Q00416 2231 aaKnown RBP-0.33□□□□□ -2.46
YOP1YPR028W RPA190P10964 1664 aaKnown RBP-0.33□□□□□ -2.46
YOP1YPR028W RPS29AP41057 56 aaKnown RBP-0.33□□□□□ -2.46
YOP1YPR028W ZEO1Q08245 113 aa-0.33□□□□□ -2.46
YOP1YPR028W SCP1Q08873 200 aa-0.33□□□□□ -2.46
YOP1YPR028W YOL097W-AQ3E7Y9 61 aa-0.33□□□□□ -2.46
YOP1YPR028W GDB1Q06625 1536 aa-0.33□□□□□ -2.46
YOP1YPR028W TOR2P32600 2474 aaKnown RBP-0.34□□□□□ -2.46
YOP1YPR028W MMS1Q06211 1407 aa-0.36□□□□□ -2.47
YOP1YPR028W TY1B-PR2P0C2J0 1756 aa-0.36□□□□□ -2.47
YOP1YPR028W NOP10Q6Q547 58 aaPredicted RBP-0.36□□□□□ -2.47
YOP1YPR028W YCL001W-BQ96VH2 84 aa-0.36□□□□□ -2.47
YOP1YPR028W TOR1P35169 2470 aa-0.36□□□□□ -2.47
YOP1YPR028W YPR117WQ06116 2489 aa-0.36□□□□□ -2.47
YOP1YPR028W PMD1P32634 1753 aa-0.37□□□□□ -2.47
YOP1YPR028W CSF1Q12150 2958 aa-0.37□□□□□ -2.47
YOP1YPR028W CUP1-1P0CX80 61 aa-0.38□□□□□ -2.47
YOP1YPR028W CUP1-2P0CX81 61 aa-0.38□□□□□ -2.47
YOP1YPR028W SWR1Q05471 1514 aa-0.38□□□□□ -2.47
YOP1YPR028W YPL225WQ08971 146 aaKnown RBP-0.39□□□□□ -2.47
YOP1YPR028W YOR343CQ12484 108 aa-0.39□□□□□ -2.47
YOP1YPR028W TY1B-DR6P0C2I3 1755 aa-0.4□□□□□ -2.47
YOP1YPR028W TY1B-LR2P0C2I5 1755 aa-0.4□□□□□ -2.47
YOP1YPR028W TY1B-JR2P47100 1755 aaKnown RBP-0.4□□□□□ -2.47
YOP1YPR028W TY1B-MR1Q04214 1755 aa-0.4□□□□□ -2.47
YOP1YPR028W TY1B-MR2Q04670 1755 aaKnown RBP-0.4□□□□□ -2.47
YOP1YPR028W TY1B-NL1Q12112 1755 aa-0.4□□□□□ -2.47
YOP1YPR028W TY1B-GR1Q12141 1755 aa-0.4□□□□□ -2.47
YOP1YPR028W TY1B-GR3Q12316 1755 aa-0.4□□□□□ -2.47
YOP1YPR028W TY1B-PLQ12414 1755 aaKnown RBP-0.4□□□□□ -2.47
YOP1YPR028W TY1B-ORQ92393 1755 aa-0.4□□□□□ -2.47
YOP1YPR028W YMR082CQ04276 118 aa-0.4□□□□□ -2.47
YOP1YPR028W YIL156W-BQ2V2P4 73 aa-0.4□□□□□ -2.47
YOP1YPR028W YCR075W-AQ3E830 75 aa-0.41□□□□□ -2.48
YOP1YPR028W YMR001C-AQ8TGS9 76 aa-0.41□□□□□ -2.48
YOP1YPR028W PDR10P51533 1564 aa-0.41□□□□□ -2.48
YOP1YPR028W XRN1P22147 1528 aaKnown RBP-0.42□□□□□ -2.48
YOP1YPR028W YOR105WQ08504 108 aa-0.42□□□□□ -2.48
YOP1YPR028W YMR175W-AQ3E766 64 aa-0.42□□□□□ -2.48
YOP1YPR028W TEL1P38110 2787 aa-0.42□□□□□ -2.48
YOP1YPR028W DYN1P36022 4092 aa-0.43□□□□□ -2.48
YOP1YPR028W BPH1P25356 2167 aa-0.43□□□□□ -2.48
YOP1YPR028W STT4P37297 1900 aa-0.44□□□□□ -2.48
YOP1YPR028W IRA2P19158 3079 aa-0.44□□□□□ -2.48
YOP1YPR028W ECM29P38737 1868 aa-0.45□□□□□ -2.48
YOP1YPR028W IRA1P18963 3092 aa-0.45□□□□□ -2.48
YOP1YPR028W TY1B-DR5P0C2I2 1755 aa-0.46□□□□□ -2.48
YOP1YPR028W TY1B-PR1P0C2I9 1755 aaKnown RBP-0.46□□□□□ -2.48
YOP1YPR028W TY1B-JR1P47098 1755 aa-0.46□□□□□ -2.48
YOP1YPR028W TY1B-ML2Q03434 1755 aaKnown RBP-0.46□□□□□ -2.48
YOP1YPR028W TY1B-ER1Q03612 1755 aa-0.46□□□□□ -2.48
YOP1YPR028W TY1B-ER2Q03619 1755 aa-0.46□□□□□ -2.48
YOP1YPR028W TY1B-DR1Q03855 1755 aa-0.46□□□□□ -2.48
YOP1YPR028W TY1B-ML1Q04711 1755 aaKnown RBP-0.46□□□□□ -2.48
YOP1YPR028W TY1B-LR1Q12088 1755 aaKnown RBP-0.46□□□□□ -2.48
Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms