RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeastyeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFA1YKL028W MPC2P38857 129 aa2.33□□□□□ -2.04
TFA1YKL028W HUG1Q6Q5K6 68 aa2.33□□□□□ -2.04
TFA1YKL028W DOP1Q03921 1698 aa2.32□□□□□ -2.04
TFA1YKL028W FAS2P19097 1887 aaKnown RBP2.31□□□□□ -2.04
TFA1YKL028W XRN1P22147 1528 aaKnown RBP2.31□□□□□ -2.04
TFA1YKL028W YER188C-AP0C0V2 99 aa2.31□□□□□ -2.04
TFA1YKL028W PDX3P38075 228 aaKnown RBP2.31□□□□□ -2.04
TFA1YKL028W YIL102CP40488 101 aa2.31□□□□□ -2.04
TFA1YKL028W YOR105WQ08504 108 aa2.31□□□□□ -2.04
TFA1YKL028W YDR010CQ12426 110 aa2.31□□□□□ -2.04
TFA1YKL028W YOR314WQ12506 109 aa2.31□□□□□ -2.04
TFA1YKL028W YBR292CP38357 123 aa2.3□□□□□ -2.04
TFA1YKL028W ATX1P38636 73 aa2.3□□□□□ -2.04
TFA1YKL028W TCB3Q03640 1545 aaKnown RBP2.3□□□□□ -2.04
TFA1YKL028W ECM29P38737 1868 aa2.29□□□□□ -2.04
TFA1YKL028W YIL086CP40503 102 aa2.29□□□□□ -2.04
TFA1YKL028W PAU23Q07987 124 aa2.29□□□□□ -2.04
TFA1YKL028W PAU17Q12370 124 aa2.29□□□□□ -2.04
TFA1YKL028W YKL065W-AQ2V2P2 73 aa2.29□□□□□ -2.04
TFA1YKL028W SHU1P38751 150 aa2.28□□□□□ -2.04
TFA1YKL028W SWM2P40342 146 aa2.28□□□□□ -2.04
TFA1YKL028W FPR2P32472 135 aa2.27□□□□□ -2.05
TFA1YKL028W SEC16P48415 2195 aaKnown RBP2.27□□□□□ -2.05
TFA1YKL028W MON2P48563 1636 aaPredicted RBP2.26□□□□□ -2.05
TFA1YKL028W RPO31P04051 1460 aa2.26□□□□□ -2.05
TFA1YKL028W YJR128WP47162 119 aa2.25□□□□□ -2.05
TFA1YKL028W COX19Q3E731 98 aa2.25□□□□□ -2.05
TFA1YKL028W YMR007WQ03675 126 aa2.25□□□□□ -2.05
TFA1YKL028W NOP10Q6Q547 58 aaPredicted RBP2.25□□□□□ -2.05
TFA1YKL028W TY1B-LR3P0C2I6 1755 aaKnown RBP2.24□□□□□ -2.05
TFA1YKL028W TY1B-PR3P0C2J1 1755 aaKnown RBP2.24□□□□□ -2.05
TFA1YKL028W STT4P37297 1900 aa2.24□□□□□ -2.05
TFA1YKL028W HHY1P39982 102 aa2.24□□□□□ -2.05
TFA1YKL028W YIL156W-BQ2V2P4 73 aa2.24□□□□□ -2.05
TFA1YKL028W UFD4P33202 1483 aa2.24□□□□□ -2.05
TFA1YKL028W SCC2Q04002 1493 aa2.24□□□□□ -2.05
TFA1YKL028W YAL065CO13511 128 aa2.23□□□□□ -2.05
TFA1YKL028W YFR010W-AP0C5N0 62 aa2.23□□□□□ -2.05
TFA1YKL028W TY1B-GR3Q12316 1755 aa2.22□□□□□ -2.05
TFA1YKL028W TY1B-ORQ92393 1755 aa2.22□□□□□ -2.05
TFA1YKL028W QCR9P22289 66 aa2.22□□□□□ -2.05
TFA1YKL028W TIM12P32830 109 aa2.22□□□□□ -2.05
TFA1YKL028W YHR173CP38864 112 aa2.22□□□□□ -2.05
TFA1YKL028W YGR121W-AQ3E816 71 aa2.22□□□□□ -2.05
TFA1YKL028W YFL041W-AQ3E817 63 aa2.22□□□□□ -2.05
TFA1YKL028W UTP10P42945 1769 aaKnown RBP2.21□□□□□ -2.06
TFA1YKL028W MOT1P32333 1867 aa2.21□□□□□ -2.06
TFA1YKL028W BEM2P39960 2167 aaKnown RBP2.2□□□□□ -2.06
TFA1YKL028W YNL042W-BQ3E7Z2 85 aa2.2□□□□□ -2.06
TFA1YKL028W POL2P21951 2222 aaKnown RBP2.2□□□□□ -2.06
TFA1YKL028W YOL131WQ08270 108 aa2.19□□□□□ -2.06
TFA1YKL028W TY1B-DR5P0C2I2 1755 aa2.19□□□□□ -2.06
TFA1YKL028W TY1B-DR6P0C2I3 1755 aa2.19□□□□□ -2.06
TFA1YKL028W TY1B-LR2P0C2I5 1755 aa2.19□□□□□ -2.06
TFA1YKL028W TY1B-PR1P0C2I9 1755 aaKnown RBP2.19□□□□□ -2.06
TFA1YKL028W TY1B-JR1P47098 1755 aa2.19□□□□□ -2.06
TFA1YKL028W TY1B-ML2Q03434 1755 aaKnown RBP2.19□□□□□ -2.06
TFA1YKL028W TY1B-ER1Q03612 1755 aa2.19□□□□□ -2.06
TFA1YKL028W TY1B-ML1Q04711 1755 aaKnown RBP2.19□□□□□ -2.06
TFA1YKL028W TY1B-GR2Q12269 1755 aa2.19□□□□□ -2.06
TFA1YKL028W TY1B-OLQ12273 1755 aa2.19□□□□□ -2.06
TFA1YKL028W TY1B-PLQ12414 1755 aaKnown RBP2.19□□□□□ -2.06
TFA1YKL028W SSS1P35179 80 aa2.18□□□□□ -2.06
TFA1YKL028W YHR213W-BQ8TGK1 99 aa2.18□□□□□ -2.06
TFA1YKL028W TY4B-HP0C2J7 1802 aa2.18□□□□□ -2.06
TFA1YKL028W YBR201C-AQ2V2Q3 67 aa2.17□□□□□ -2.06
TFA1YKL028W RRP5Q05022 1729 aaKnown RBP2.17□□□□□ -2.06
TFA1YKL028W DNF1P32660 1571 aa2.17□□□□□ -2.06
TFA1YKL028W YMR141CP40211 102 aa2.17□□□□□ -2.06
TFA1YKL028W HUA1P40325 198 aa2.17□□□□□ -2.06
TFA1YKL028W YMR122W-AQ3E842 84 aa2.17□□□□□ -2.06
TFA1YKL028W Q0032Q9ZZX7 96 aa2.17□□□□□ -2.06
TFA1YKL028W SMC4Q12267 1418 aa2.16□□□□□ -2.06
TFA1YKL028W YGR035W-AQ45U48 73 aa2.15□□□□□ -2.07
TFA1YKL028W PMD1P32634 1753 aa2.15□□□□□ -2.07
TFA1YKL028W TY2B-CP25384 1770 aa2.14□□□□□ -2.07
TFA1YKL028W TY2B-DR1Q12472 1770 aa2.14□□□□□ -2.07
TFA1YKL028W BPH1P25356 2167 aa2.14□□□□□ -2.07
TFA1YKL028W DNF3Q12674 1656 aa2.14□□□□□ -2.07
TFA1YKL028W MYO4P32492 1471 aa2.13□□□□□ -2.07
TFA1YKL028W YDL022C-AP0C5L6 82 aa2.12□□□□□ -2.07
TFA1YKL028W YNL198CP40166 100 aa2.12□□□□□ -2.07
TFA1YKL028W VPS15P22219 1454 aa2.12□□□□□ -2.07
TFA1YKL028W URA2P07259 2214 aaKnown RBP2.12□□□□□ -2.07
TFA1YKL028W BLM10P43583 2143 aa2.1□□□□□ -2.07
TFA1YKL028W ATP18P81450 59 aa2.1□□□□□ -2.07
TFA1YKL028W SGF11Q03067 99 aa2.1□□□□□ -2.07
TFA1YKL028W YOR034C-AQ3E735 80 aa2.1□□□□□ -2.07
TFA1YKL028W FKS3Q04952 1785 aa2.09□□□□□ -2.08
TFA1YKL028W COX7P10174 60 aa2.08□□□□□ -2.08
TFA1YKL028W SPI1P40092 148 aa2.08□□□□□ -2.08
TFA1YKL028W TY1B-JR2P47100 1755 aaKnown RBP2.08□□□□□ -2.08
TFA1YKL028W TY1B-MR1Q04214 1755 aa2.08□□□□□ -2.08
TFA1YKL028W TY1B-MR2Q04670 1755 aaKnown RBP2.08□□□□□ -2.08
TFA1YKL028W TY1B-NL1Q12112 1755 aa2.08□□□□□ -2.08
TFA1YKL028W TY1B-GR1Q12141 1755 aa2.08□□□□□ -2.08
TFA1YKL028W TY1B-BLQ12490 1755 aa2.08□□□□□ -2.08
TFA1YKL028W PAU7P39545 55 aa2.08□□□□□ -2.08
TFA1YKL028W ERI1P62651 68 aaKnown RBP2.08□□□□□ -2.08
TFA1YKL028W YBR072C-AQ3E794 53 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms