RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeastyeast

Gene VMA22, Length 546 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA22YHR060W YNL042W-BQ3E7Z2 85 aa1.95□□□□□ -2.1
VMA22YHR060W SLH1P53327 1967 aaKnown RBP1.95□□□□□ -2.1
VMA22YHR060W YDR010CQ12426 110 aa1.94□□□□□ -2.1
VMA22YHR060W YOR314WQ12506 109 aa1.94□□□□□ -2.1
VMA22YHR060W LSM2P38203 95 aaKnown RBP1.93□□□□□ -2.1
VMA22YHR060W YER188C-AP0C0V2 99 aa1.92□□□□□ -2.1
VMA22YHR060W PAU23Q07987 124 aa1.92□□□□□ -2.1
VMA22YHR060W PAU17Q12370 124 aa1.92□□□□□ -2.1
VMA22YHR060W YPR145C-AQ2V2P0 78 aa1.92□□□□□ -2.1
VMA22YHR060W MYO1P08964 1928 aa1.91□□□□□ -2.1
VMA22YHR060W URB1P34241 1764 aaKnown RBP1.91□□□□□ -2.1
VMA22YHR060W YAL065CO13511 128 aa1.9□□□□□ -2.11
VMA22YHR060W BEM2P39960 2167 aaKnown RBP1.89□□□□□ -2.11
VMA22YHR060W SWM2P40342 146 aa1.89□□□□□ -2.11
VMA22YHR060W COX7P10174 60 aa1.88□□□□□ -2.11
VMA22YHR060W RPL37BP51402 88 aaKnown RBP1.88□□□□□ -2.11
VMA22YHR060W YDR119W-AQ2V2P9 66 aa1.88□□□□□ -2.11
VMA22YHR060W Q0032Q9ZZX7 96 aa1.88□□□□□ -2.11
VMA22YHR060W YRF1-1P0CX20 1796 aa1.87□□□□□ -2.11
VMA22YHR060W YRF1-5P0CX21 1796 aa1.87□□□□□ -2.11
VMA22YHR060W YRF1-8P0CX22 1796 aa1.87□□□□□ -2.11
VMA22YHR060W PAI3P01094 68 aa1.87□□□□□ -2.11
VMA22YHR060W YBR201C-AQ2V2Q3 67 aa1.87□□□□□ -2.11
VMA22YHR060W NOP10Q6Q547 58 aaPredicted RBP1.87□□□□□ -2.11
VMA22YHR060W HFA1P32874 2273 aa1.87□□□□□ -2.11
VMA22YHR060W YMR122W-AQ3E842 84 aa1.86□□□□□ -2.11
VMA22YHR060W RPL38P49167 78 aaKnown RBP1.85□□□□□ -2.11
VMA22YHR060W YLR307C-AQ3E825 87 aa1.85□□□□□ -2.11
VMA22YHR060W NUP159P40477 1460 aa1.85□□□□□ -2.11
VMA22YHR060W YRF1-2P40105 1681 aa1.85□□□□□ -2.11
VMA22YHR060W XRN1P22147 1528 aaKnown RBP1.83□□□□□ -2.12
VMA22YHR060W YLR157W-EP0CF00 54 aa1.83□□□□□ -2.12
VMA22YHR060W QCR9P22289 66 aa1.83□□□□□ -2.12
VMA22YHR060W AUA1P32450 94 aa1.83□□□□□ -2.12
VMA22YHR060W ATP18P81450 59 aa1.83□□□□□ -2.12
VMA22YHR060W YOL097W-AQ3E7Y9 61 aa1.83□□□□□ -2.12
VMA22YHR060W SEC7P11075 2009 aaKnown RBP1.83□□□□□ -2.12
VMA22YHR060W YIL156W-BQ2V2P4 73 aa1.82□□□□□ -2.12
VMA22YHR060W LAA1P39526 2014 aa1.82□□□□□ -2.12
VMA22YHR060W BRR2P32639 2163 aaKnown RBP1.81□□□□□ -2.12
VMA22YHR060W TY4B-HP0C2J7 1802 aa1.81□□□□□ -2.12
VMA22YHR060W SEC16P48415 2195 aaKnown RBP1.81□□□□□ -2.12
VMA22YHR060W ATX1P38636 73 aa1.8□□□□□ -2.12
VMA22YHR060W TY1B-PR2P0C2J0 1756 aa1.8□□□□□ -2.12
VMA22YHR060W YGR121W-AQ3E816 71 aa1.79□□□□□ -2.12
VMA22YHR060W YNL198CP40166 100 aa1.77□□□□□ -2.13
VMA22YHR060W RPC10P40422 70 aa1.77□□□□□ -2.13
VMA22YHR060W SGF11Q03067 99 aa1.77□□□□□ -2.13
VMA22YHR060W SDH6Q3E785 79 aa1.77□□□□□ -2.13
VMA22YHR060W TY1B-NL2Q99337 1749 aaKnown RBP1.77□□□□□ -2.13
VMA22YHR060W SIN3P22579 1536 aa1.76□□□□□ -2.13
VMA22YHR060W YFL041W-AQ3E817 63 aa1.76□□□□□ -2.13
VMA22YHR060W DNF3Q12674 1656 aa1.75□□□□□ -2.13
VMA22YHR060W MLP1Q02455 1875 aaKnown RBP1.75□□□□□ -2.13
VMA22YHR060W UFD4P33202 1483 aa1.74□□□□□ -2.13
VMA22YHR060W YJR107C-AP0CT86 78 aa1.73□□□□□ -2.13
VMA22YHR060W TIM12P32830 109 aa1.72□□□□□ -2.13
VMA22YHR060W YOL164W-AQ3E7A5 60 aa1.72□□□□□ -2.13
VMA22YHR060W YGR035W-AQ45U48 73 aa1.72□□□□□ -2.13
VMA22YHR060W PAU7P39545 55 aa1.71□□□□□ -2.14
VMA22YHR060W YNL190WP53872 204 aa1.71□□□□□ -2.14
VMA22YHR060W DOP1Q03921 1698 aa1.71□□□□□ -2.14
VMA22YHR060W YPR108W-AQ3E7B3 70 aa1.7□□□□□ -2.14
VMA22YHR060W TY1B-BRQ12193 1756 aa1.7□□□□□ -2.14
VMA22YHR060W YDL022C-AP0C5L6 82 aa1.69□□□□□ -2.14
VMA22YHR060W SSS1P35179 80 aa1.69□□□□□ -2.14
VMA22YHR060W YBR032WP38223 100 aa1.69□□□□□ -2.14
VMA22YHR060W ATP17Q06405 101 aa1.69□□□□□ -2.14
VMA22YHR060W SPI1P40092 148 aa1.68□□□□□ -2.14
VMA22YHR060W SCC2Q04002 1493 aa1.68□□□□□ -2.14
VMA22YHR060W RIM15P43565 1770 aa1.67□□□□□ -2.14
VMA22YHR060W TY1B-BLQ12490 1755 aa1.66□□□□□ -2.14
VMA22YHR060W TCB3Q03640 1545 aaKnown RBP1.66□□□□□ -2.14
VMA22YHR060W EDC1P53080 175 aaPredicted RBP1.64□□□□□ -2.15
VMA22YHR060W MOT1P32333 1867 aa1.61□□□□□ -2.15
VMA22YHR060W POL2P21951 2222 aaKnown RBP1.61□□□□□ -2.15
VMA22YHR060W TY1B-LR3P0C2I6 1755 aaKnown RBP1.61□□□□□ -2.15
VMA22YHR060W TY1B-PR3P0C2J1 1755 aaKnown RBP1.61□□□□□ -2.15
VMA22YHR060W ECM29P38737 1868 aa1.6□□□□□ -2.15
VMA22YHR060W ERI1P62651 68 aaKnown RBP1.6□□□□□ -2.15
VMA22YHR060W HUB1Q6Q546 73 aa1.6□□□□□ -2.15
VMA22YHR060W IQG1Q12280 1495 aa1.6□□□□□ -2.15
VMA22YHR060W VPS15P22219 1454 aa1.59□□□□□ -2.15
VMA22YHR060W YSY6P38374 65 aa1.59□□□□□ -2.15
VMA22YHR060W YKL018C-AQ3E7A7 99 aa1.59□□□□□ -2.15
VMA22YHR060W TY2B-CP25384 1770 aa1.59□□□□□ -2.16
VMA22YHR060W UTP10P42945 1769 aaKnown RBP1.59□□□□□ -2.16
VMA22YHR060W TY2B-DR1Q12472 1770 aa1.59□□□□□ -2.16
VMA22YHR060W MYO4P32492 1471 aa1.58□□□□□ -2.16
VMA22YHR060W RPS29BP41058 56 aaKnown RBP1.58□□□□□ -2.16
VMA22YHR060W YOL131WQ08270 108 aa1.58□□□□□ -2.16
VMA22YHR060W YOR032W-AQ8TGS1 66 aa1.58□□□□□ -2.16
VMA22YHR060W IML1P47170 1584 aa1.58□□□□□ -2.16
VMA22YHR060W URA2P07259 2214 aaKnown RBP1.58□□□□□ -2.16
VMA22YHR060W SMC4Q12267 1418 aa1.57□□□□□ -2.16
VMA22YHR060W TY1B-DR1Q03855 1755 aa1.57□□□□□ -2.16
VMA22YHR060W TY1B-DR3Q99231 1755 aa1.57□□□□□ -2.16
VMA22YHR060W FAS2P19097 1887 aaKnown RBP1.56□□□□□ -2.16
VMA22YHR060W YLR146W-AQ2V2P1 62 aa1.56□□□□□ -2.16
VMA22YHR060W YIL102C-AQ2V2P5 75 aa1.56□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms