RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C YLR157W-EP0CF00 54 aa1.61□□□□□ -2.15
SPB4YFL002C YRF1-1P0CX20 1796 aa1.61□□□□□ -2.15
SPB4YFL002C YRF1-5P0CX21 1796 aa1.61□□□□□ -2.15
SPB4YFL002C YRF1-8P0CX22 1796 aa1.61□□□□□ -2.15
SPB4YFL002C RPA12P32529 125 aaKnown RBP1.61□□□□□ -2.15
SPB4YFL002C YER188C-AP0C0V2 99 aa1.6□□□□□ -2.15
SPB4YFL002C TY4B-HP0C2J7 1802 aa1.59□□□□□ -2.15
SPB4YFL002C POC4Q12245 148 aaPredicted RBP1.58□□□□□ -2.16
SPB4YFL002C YOR343CQ12484 108 aa1.58□□□□□ -2.16
SPB4YFL002C POL2P21951 2222 aaKnown RBP1.57□□□□□ -2.16
SPB4YFL002C YDR010CQ12426 110 aa1.56□□□□□ -2.16
SPB4YFL002C YNL042W-BQ3E7Z2 85 aa1.56□□□□□ -2.16
SPB4YFL002C PAU23Q07987 124 aa1.55□□□□□ -2.16
SPB4YFL002C PAU17Q12370 124 aa1.55□□□□□ -2.16
SPB4YFL002C FPR2P32472 135 aa1.54□□□□□ -2.16
SPB4YFL002C TOM6P33448 61 aa1.53□□□□□ -2.16
SPB4YFL002C Q0032Q9ZZX7 96 aa1.53□□□□□ -2.16
SPB4YFL002C YPR145C-AQ2V2P0 78 aa1.52□□□□□ -2.17
SPB4YFL002C YBR201C-AQ2V2Q3 67 aa1.52□□□□□ -2.17
SPB4YFL002C YHR214C-DP0CX93 97 aa1.52□□□□□ -2.17
SPB4YFL002C YAL065CO13511 128 aa1.51□□□□□ -2.17
SPB4YFL002C YOR105WQ08504 108 aa1.5□□□□□ -2.17
SPB4YFL002C RPC10P40422 70 aa1.5□□□□□ -2.17
SPB4YFL002C YMR122W-AQ3E842 84 aa1.5□□□□□ -2.17
SPB4YFL002C PDX3P38075 228 aaKnown RBP1.49□□□□□ -2.17
SPB4YFL002C YOL164W-AQ3E7A5 60 aa1.48□□□□□ -2.17
SPB4YFL002C NOP10Q6Q547 58 aaPredicted RBP1.48□□□□□ -2.17
SPB4YFL002C YDR381C-AQ3E6R5 114 aa1.47□□□□□ -2.17
SPB4YFL002C COX7P10174 60 aa1.47□□□□□ -2.17
SPB4YFL002C YOR314WQ12506 109 aa1.46□□□□□ -2.18
SPB4YFL002C YKL065W-AQ2V2P2 73 aa1.46□□□□□ -2.18
SPB4YFL002C YIL156W-BQ2V2P4 73 aa1.46□□□□□ -2.18
SPB4YFL002C RPL38P49167 78 aaKnown RBP1.45□□□□□ -2.18
SPB4YFL002C LSM2P38203 95 aaKnown RBP1.44□□□□□ -2.18
SPB4YFL002C MMS22Q06164 1454 aa1.44□□□□□ -2.18
SPB4YFL002C YNL190WP53872 204 aa1.43□□□□□ -2.18
SPB4YFL002C ATP18P81450 59 aa1.43□□□□□ -2.18
SPB4YFL002C YHR213W-AQ8TGT4 77 aa1.43□□□□□ -2.18
SPB4YFL002C YJR107C-AP0CT86 78 aa1.42□□□□□ -2.18
SPB4YFL002C YRF1-2P40105 1681 aa1.41□□□□□ -2.18
SPB4YFL002C ESP1Q03018 1630 aa1.41□□□□□ -2.18
SPB4YFL002C TY1B-BLQ12490 1755 aa1.41□□□□□ -2.18
SPB4YFL002C SWM2P40342 146 aa1.4□□□□□ -2.18
SPB4YFL002C YNL198CP40166 100 aa1.4□□□□□ -2.19
SPB4YFL002C YDR119W-AQ2V2P9 66 aa1.4□□□□□ -2.19
SPB4YFL002C MLP1Q02455 1875 aaKnown RBP1.4□□□□□ -2.19
SPB4YFL002C DNF3Q12674 1656 aa1.39□□□□□ -2.19
SPB4YFL002C RIM15P43565 1770 aa1.39□□□□□ -2.19
SPB4YFL002C SDH6Q3E785 79 aa1.38□□□□□ -2.19
SPB4YFL002C XRN1P22147 1528 aaKnown RBP1.37□□□□□ -2.19
SPB4YFL002C ECM29P38737 1868 aa1.37□□□□□ -2.19
SPB4YFL002C TY1B-PR2P0C2J0 1756 aa1.36□□□□□ -2.19
SPB4YFL002C SGF11Q03067 99 aa1.36□□□□□ -2.19
SPB4YFL002C BLM10P43583 2143 aa1.36□□□□□ -2.19
SPB4YFL002C SNF2P22082 1703 aa1.36□□□□□ -2.19
SPB4YFL002C QCR9P22289 66 aa1.36□□□□□ -2.19
SPB4YFL002C YGR121W-AQ3E816 71 aa1.36□□□□□ -2.19
SPB4YFL002C YOL097W-AQ3E7Y9 61 aa1.35□□□□□ -2.19
SPB4YFL002C TY1B-BRQ12193 1756 aa1.34□□□□□ -2.19
SPB4YFL002C YDL022C-AP0C5L6 82 aa1.33□□□□□ -2.2
SPB4YFL002C TIM12P32830 109 aa1.32□□□□□ -2.2
SPB4YFL002C YPR108W-AQ3E7B3 70 aa1.31□□□□□ -2.2
SPB4YFL002C NUP159P40477 1460 aa1.31□□□□□ -2.2
SPB4YFL002C PAI3P01094 68 aa1.31□□□□□ -2.2
SPB4YFL002C UTP10P42945 1769 aaKnown RBP1.3□□□□□ -2.2
SPB4YFL002C PRP8P33334 2413 aaKnown RBP1.3□□□□□ -2.2
SPB4YFL002C SIN3P22579 1536 aa1.3□□□□□ -2.2
SPB4YFL002C YGR035W-AQ45U48 73 aa1.29□□□□□ -2.2
SPB4YFL002C MOT1P32333 1867 aa1.29□□□□□ -2.2
SPB4YFL002C RPS29BP41058 56 aaKnown RBP1.29□□□□□ -2.2
SPB4YFL002C TY1B-LR3P0C2I6 1755 aaKnown RBP1.28□□□□□ -2.2
SPB4YFL002C TY1B-PR3P0C2J1 1755 aaKnown RBP1.28□□□□□ -2.2
SPB4YFL002C STT4P37297 1900 aa1.28□□□□□ -2.2
SPB4YFL002C TY1B-NL2Q99337 1749 aaKnown RBP1.28□□□□□ -2.21
SPB4YFL002C FAS2P19097 1887 aaKnown RBP1.27□□□□□ -2.21
SPB4YFL002C YBR032WP38223 100 aa1.26□□□□□ -2.21
SPB4YFL002C YFR009W-AP0C5M9 85 aa1.26□□□□□ -2.21
SPB4YFL002C ATX1P38636 73 aa1.26□□□□□ -2.21
SPB4YFL002C TY1B-DR6P0C2I3 1755 aa1.25□□□□□ -2.21
SPB4YFL002C TY1B-LR2P0C2I5 1755 aa1.25□□□□□ -2.21
SPB4YFL002C TY1B-JR2P47100 1755 aaKnown RBP1.25□□□□□ -2.21
SPB4YFL002C TY1B-MR1Q04214 1755 aa1.25□□□□□ -2.21
SPB4YFL002C TY1B-MR2Q04670 1755 aaKnown RBP1.25□□□□□ -2.21
SPB4YFL002C TY1B-NL1Q12112 1755 aa1.25□□□□□ -2.21
SPB4YFL002C TY1B-GR1Q12141 1755 aa1.25□□□□□ -2.21
SPB4YFL002C TY1B-GR3Q12316 1755 aa1.25□□□□□ -2.21
SPB4YFL002C TY1B-PLQ12414 1755 aaKnown RBP1.25□□□□□ -2.21
SPB4YFL002C TY1B-ORQ92393 1755 aa1.25□□□□□ -2.21
SPB4YFL002C YBR016WP38216 128 aa1.24□□□□□ -2.21
SPB4YFL002C YIL134C-AQ45U18 67 aa1.24□□□□□ -2.21
SPB4YFL002C UFD4P33202 1483 aa1.24□□□□□ -2.21
SPB4YFL002C MON2P48563 1636 aaPredicted RBP1.23□□□□□ -2.21
SPB4YFL002C ATP17Q06405 101 aa1.23□□□□□ -2.21
SPB4YFL002C TY2B-CP25384 1770 aa1.23□□□□□ -2.21
SPB4YFL002C TY2B-DR1Q12472 1770 aa1.23□□□□□ -2.21
SPB4YFL002C PAU7P39545 55 aa1.22□□□□□ -2.21
SPB4YFL002C YKL018C-AQ3E7A7 99 aa1.22□□□□□ -2.21
SPB4YFL002C YFL041W-AQ3E817 63 aa1.22□□□□□ -2.21
SPB4YFL002C BPH1P25356 2167 aa1.22□□□□□ -2.21
SPB4YFL002C TY1B-DR5P0C2I2 1755 aa1.22□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms