RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W YGR121W-AQ3E816 71 aa3.21□□□□□ -1.89
TRS85YDR108W CCW14O13547 238 aa3.21□□□□□ -1.9
TRS85YDR108W YCR022CP25620 114 aa3.21□□□□□ -1.9
TRS85YDR108W YEL045CP32616 141 aa3.21□□□□□ -1.9
TRS85YDR108W PCP1P53259 346 aa3.21□□□□□ -1.9
TRS85YDR108W YOR008C-AQ3E7B9 74 aa3.21□□□□□ -1.9
TRS85YDR108W IRC21Q04772 201 aa3.2□□□□□ -1.9
TRS85YDR108W SRL1Q08673 210 aa3.2□□□□□ -1.9
TRS85YDR108W YER175W-AQ8TGU4 54 aa3.2□□□□□ -1.9
TRS85YDR108W YAL064W-BO13512 126 aa3.2□□□□□ -1.9
TRS85YDR108W MDM35O60200 86 aa3.2□□□□□ -1.9
TRS85YDR108W RPL15AP05748 204 aaKnown RBP3.2□□□□□ -1.9
TRS85YDR108W SHU1P38751 150 aa3.2□□□□□ -1.9
TRS85YDR108W YGL193CP53097 103 aa3.2□□□□□ -1.9
TRS85YDR108W YGR018CP53211 109 aa3.2□□□□□ -1.9
TRS85YDR108W YOL160WQ08321 113 aa3.2□□□□□ -1.9
TRS85YDR108W RNH203Q12338 110 aa3.2□□□□□ -1.9
TRS85YDR108W YBL071CP38185 102 aa3.19□□□□□ -1.9
TRS85YDR108W URM1P40554 99 aaPredicted RBP3.19□□□□□ -1.9
TRS85YDR108W NCE102Q12207 173 aaRIP-Chip data3.19□□□□□ -1.9not detected
TRS85YDR108W YLR342W-AQ3E810 57 aa3.19□□□□□ -1.9
TRS85YDR108W ARF1P11076 181 aaKnown RBP3.18□□□□□ -1.9
TRS85YDR108W KRE9P39005 276 aa3.18□□□□□ -1.9
TRS85YDR108W YAL064WP39711 94 aa3.18□□□□□ -1.9
TRS85YDR108W YGL088WP53151 121 aa3.18□□□□□ -1.9
TRS85YDR108W TRS23Q03784 219 aa3.18□□□□□ -1.9
TRS85YDR108W NOP10Q6Q547 58 aaPredicted RBP3.18□□□□□ -1.9
TRS85YDR108W MPC3P53311 146 aa3.18□□□□□ -1.9
TRS85YDR108W YMR122CQ03879 124 aa3.18□□□□□ -1.9
TRS85YDR108W HSP150P32478 413 aa3.17□□□□□ -1.9
TRS85YDR108W YHL005CP38752 130 aa3.17□□□□□ -1.9
TRS85YDR108W SED1Q01589 338 aa3.17□□□□□ -1.9
TRS85YDR108W SPG4Q04438 115 aa3.17□□□□□ -1.9
TRS85YDR108W YKL065W-AQ2V2P2 73 aa3.17□□□□□ -1.9
TRS85YDR108W YOR034C-AQ3E735 80 aa3.17□□□□□ -1.9
TRS85YDR108W OST5Q92316 86 aa3.17□□□□□ -1.9
TRS85YDR108W YER188C-AP0C0V2 99 aa3.16□□□□□ -1.9
TRS85YDR108W YGR035W-AQ45U48 73 aa3.16□□□□□ -1.9
TRS85YDR108W RPL36BO14455 100 aaKnown RBP3.16□□□□□ -1.9
TRS85YDR108W RPL36AP05745 100 aaPredicted RBP3.16□□□□□ -1.9
TRS85YDR108W YSF3P0C074 85 aaPredicted RBP3.16□□□□□ -1.9
TRS85YDR108W YJR107C-AP0CT86 78 aa3.16□□□□□ -1.9
TRS85YDR108W ARC15P40518 154 aaRIP-Chip data3.16□□□□□ -1.9 RIP-Chip
TRS85YDR108W YDR182W-AQ3E796 67 aa3.16□□□□□ -1.9
TRS85YDR108W YFL015CP43578 164 aa3.15□□□□□ -1.9
TRS85YDR108W SPG1P50088 95 aa3.15□□□□□ -1.9
TRS85YDR108W DDR48P18899 430 aaKnown RBP3.15□□□□□ -1.91
TRS85YDR108W TVP23P38962 199 aa3.15□□□□□ -1.91
TRS85YDR108W REE1P40893 198 aa3.15□□□□□ -1.91
TRS85YDR108W RGM1Q00453 211 aa3.15□□□□□ -1.91
TRS85YDR108W YER135CP40082 130 aa3.14□□□□□ -1.91
TRS85YDR108W YIR020CP40575 100 aa3.14□□□□□ -1.91
TRS85YDR108W YPR153WQ06537 140 aa3.14□□□□□ -1.91
TRS85YDR108W YOR020W-AQ3E824 90 aa3.14□□□□□ -1.91
TRS85YDR108W YOL166W-AQ8TGJ1 51 aa3.14□□□□□ -1.91
TRS85YDR108W RPS30AP0CX33 63 aaKnown RBP3.13□□□□□ -1.91
TRS85YDR108W RPS30BP0CX34 63 aaKnown RBP3.13□□□□□ -1.91
TRS85YDR108W RPL38P49167 78 aaKnown RBP3.13□□□□□ -1.91
TRS85YDR108W YKL097CP34245 136 aa3.13□□□□□ -1.91
TRS85YDR108W QCR8P08525 94 aa3.12□□□□□ -1.91
TRS85YDR108W RPS23AP0CX29 145 aaKnown RBP3.12□□□□□ -1.91
TRS85YDR108W RPS23BP0CX30 145 aa3.12□□□□□ -1.91
TRS85YDR108W YJR146WP47174 117 aa3.12□□□□□ -1.91
TRS85YDR108W BLM10P43583 2143 aa3.12□□□□□ -1.91
TRS85YDR108W YLR236CA0A023PZG4 107 aa3.12□□□□□ -1.91
TRS85YDR108W FYV5P25585 152 aa3.12□□□□□ -1.91
TRS85YDR108W HOT13P36078 116 aa3.12□□□□□ -1.91
TRS85YDR108W RPS27AP35997 82 aaKnown RBP3.1□□□□□ -1.91
TRS85YDR108W RRT1P38192 103 aa3.1□□□□□ -1.91
TRS85YDR108W RPS27BP38711 82 aa3.1□□□□□ -1.91
TRS85YDR108W YJL027CP47063 138 aaPredicted RBP3.1□□□□□ -1.91
TRS85YDR108W ATP18P81450 59 aa3.1□□□□□ -1.91
TRS85YDR108W YPS5P53057 165 aa3.1□□□□□ -1.91
TRS85YDR108W YDR114CQ04597 100 aa3.1□□□□□ -1.91
TRS85YDR108W YHL037CP38733 133 aa3.09□□□□□ -1.91
TRS85YDR108W UTH1P36135 365 aa3.08□□□□□ -1.92
TRS85YDR108W RPR2P40571 144 aa3.08□□□□□ -1.92
TRS85YDR108W YMR244WQ04018 355 aa3.08□□□□□ -1.92
TRS85YDR108W YOR032W-AQ8TGS1 66 aa3.08□□□□□ -1.92
TRS85YDR108W YFR009W-AP0C5M9 85 aa3.07□□□□□ -1.92
TRS85YDR108W YEL008WP40001 126 aa3.06□□□□□ -1.92
TRS85YDR108W YIL156W-BQ2V2P4 73 aa3.06□□□□□ -1.92
TRS85YDR108W MRPL39P36533 70 aa3.05□□□□□ -1.92
TRS85YDR108W SPC1P46965 94 aa3.05□□□□□ -1.92
TRS85YDR108W YER145C-AA0A023PYF4 145 aa3.05□□□□□ -1.92
TRS85YDR108W QCR10P37299 77 aa3.05□□□□□ -1.92
TRS85YDR108W YBR200W-AQ3E755 54 aa3.05□□□□□ -1.92
TRS85YDR108W YCR095W-AQ3E787 52 aa3.05□□□□□ -1.92
TRS85YDR108W YCR043CP25361 127 aa3.04□□□□□ -1.92
TRS85YDR108W YOL085CQ99345 113 aa3.04□□□□□ -1.92
TRS85YDR108W YIL102CP40488 101 aa3.04□□□□□ -1.92
TRS85YDR108W LIP1Q03579 150 aa3.04□□□□□ -1.92
TRS85YDR108W YFR032C-BQ8TGU2 87 aa3.04□□□□□ -1.92
TRS85YDR108W YGR025WP53216 100 aa3.03□□□□□ -1.92
TRS85YDR108W YLL006W-AQ3E814 58 aa3.02□□□□□ -1.93
TRS85YDR108W BEM2P39960 2167 aaKnown RBP3.02□□□□□ -1.93
TRS85YDR108W RPS11AP0CX47 156 aaKnown RBP3.02□□□□□ -1.93
TRS85YDR108W RPS11BP0CX48 156 aaKnown RBP3.02□□□□□ -1.93
TRS85YDR108W MRPL38P35996 138 aaPredicted RBP3.02□□□□□ -1.93
TRS85YDR108W COX14P39103 70 aa3.02□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms