RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 PCDHB18PQ96TA0 734 aa13.15□□□□□ -0.3
LINC00963-216ENST00000623185 LRRC3Q9BY71 257 aa13.15□□□□□ -0.3
LINC00963-216ENST00000623185 PIDD1Q9HB75 910 aa13.15□□□□□ -0.3
LINC00963-216ENST00000623185 ARHGAP20Q9P2F6 1191 aa13.15□□□□□ -0.3
LINC00963-216ENST00000623185 DNMT3BQ9UBC3 853 aaKnown RBP13.15□□□□□ -0.3
LINC00963-216ENST00000623185 UXTQ9UBK9 157 aaPredicted RBP13.15□□□□□ -0.3
LINC00963-216ENST00000623185 TSC2P49815 1807 aa13.15□□□□□ -0.3
LINC00963-216ENST00000623185 PRRC2BQ5JSZ5 2229 aaKnown RBP13.15□□□□□ -0.31
LINC00963-216ENST00000623185 SOBPA7XYQ1 873 aa13.14□□□□□ -0.31
LINC00963-216ENST00000623185 TULP2O00295 520 aa13.14□□□□□ -0.31
LINC00963-216ENST00000623185 ZNF197O14709 1029 aa13.14□□□□□ -0.31
LINC00963-216ENST00000623185 YWHAQP27348 245 aa13.14□□□□□ -0.31
LINC00963-216ENST00000623185 GABRB2P47870 512 aa13.14□□□□□ -0.31
LINC00963-216ENST00000623185 GSDMDP57764 484 aa13.14□□□□□ -0.31
LINC00963-216ENST00000623185 SKIV2LQ15477 1246 aaKnown RBP13.14□□□□□ -0.31
LINC00963-216ENST00000623185 RARS2Q5T160 578 aaKnown RBP13.14□□□□□ -0.31
LINC00963-216ENST00000623185 CYP4A22Q5TCH4 519 aa13.14□□□□□ -0.31
LINC00963-216ENST00000623185 SDHAF4Q5VUM1 108 aa13.14□□□□□ -0.31
LINC00963-216ENST00000623185 EP400NLQ6ZTU2 488 aa13.14□□□□□ -0.31
LINC00963-216ENST00000623185 SPC24Q8NBT2 197 aa13.14□□□□□ -0.31
LINC00963-216ENST00000623185 SMRP1Q8NCR6 262 aa13.14□□□□□ -0.31
LINC00963-216ENST00000623185 MAFAQ8NHW3 353 aaPredicted RBP13.14□□□□□ -0.31
LINC00963-216ENST00000623185 GPR152Q8TDT2 470 aa13.14□□□□□ -0.31
LINC00963-216ENST00000623185 PPM1EQ8WY54 764 aa13.14□□□□□ -0.31
LINC00963-216ENST00000623185 OVCA2Q8WZ82 227 aa13.14□□□□□ -0.31
LINC00963-216ENST00000623185 RIPOR3Q96MK2 946 aa13.14□□□□□ -0.31
LINC00963-216ENST00000623185 MIS12Q9H081 205 aa13.14□□□□□ -0.31
LINC00963-216ENST00000623185 UBE2ZQ9H832 354 aaPredicted RBP13.14□□□□□ -0.31
LINC00963-216ENST00000623185 LRRC4Q9HBW1 653 aa13.14□□□□□ -0.31
LINC00963-216ENST00000623185 CNGB3Q9NQW8 809 aa13.14□□□□□ -0.31
LINC00963-216ENST00000623185 ADAMTS1Q9UHI8 967 aa13.14□□□□□ -0.31
LINC00963-216ENST00000623185 CD207Q9UJ71 328 aa13.14□□□□□ -0.31
LINC00963-216ENST00000623185 SCML2Q9UQR0 700 aa13.14□□□□□ -0.31
LINC00963-216ENST00000623185 COL4A4P53420 1690 aaPredicted RBP13.13□□□□□ -0.31
LINC00963-216ENST00000623185 GABBR2O75899 941 aa13.13□□□□□ -0.31
LINC00963-216ENST00000623185 FBXO21O94952 628 aa13.13□□□□□ -0.31
LINC00963-216ENST00000623185 F11P03951 625 aa13.13□□□□□ -0.31
LINC00963-216ENST00000623185 FECHP22830 423 aa13.13□□□□□ -0.31
LINC00963-216ENST00000623185 SSTR3P32745 418 aaPredicted RBP13.13□□□□□ -0.31
LINC00963-216ENST00000623185 MTHFRP42898 656 aa13.13□□□□□ -0.31
LINC00963-216ENST00000623185 TKTL1P51854 596 aa13.13□□□□□ -0.31
LINC00963-216ENST00000623185 SLC5A3P53794 718 aa13.13□□□□□ -0.31
LINC00963-216ENST00000623185 NOMO3P69849 1222 aa13.13□□□□□ -0.31
LINC00963-216ENST00000623185 GOLGA8FQ08AF8 430 aa13.13□□□□□ -0.31
LINC00963-216ENST00000623185 GOLGA8DPQ0D2H9 430 aa13.13□□□□□ -0.31
LINC00963-216ENST00000623185 MTMR3Q13615 1198 aa13.13□□□□□ -0.31
LINC00963-216ENST00000623185 CLEC16AQ2KHT3 1053 aa13.13□□□□□ -0.31
LINC00963-216ENST00000623185 ASTE1Q2TB18 679 aaPredicted RBP13.13□□□□□ -0.31
LINC00963-216ENST00000623185 PUS10Q3MIT2 529 aaKnown RBP13.13□□□□□ -0.31
LINC00963-216ENST00000623185 SNX30Q5VWJ9 437 aa13.13□□□□□ -0.31
LINC00963-216ENST00000623185 ACAD10Q6JQN1 1059 aa13.13□□□□□ -0.31
LINC00963-216ENST00000623185 MON1AQ86VX9 555 aa13.13□□□□□ -0.31
LINC00963-216ENST00000623185 ERICH1Q86X53 443 aa13.13□□□□□ -0.31
LINC00963-216ENST00000623185 ZDHHC17Q8IUH5 632 aa13.13□□□□□ -0.31
LINC00963-216ENST00000623185 TMTC1Q8IUR5 882 aa13.13□□□□□ -0.31
LINC00963-216ENST00000623185 ZNF276Q8N554 614 aa13.13□□□□□ -0.31
LINC00963-216ENST00000623185 SCAMP5Q8TAC9 235 aa13.13□□□□□ -0.31
LINC00963-216ENST00000623185 CPA5Q8WXQ8 436 aa13.13□□□□□ -0.31
LINC00963-216ENST00000623185 VCPIP1Q96JH7 1222 aa13.13□□□□□ -0.31
LINC00963-216ENST00000623185 PPP1R13BQ96KQ4 1090 aa13.13□□□□□ -0.31
LINC00963-216ENST00000623185 CCDC42Q96M95 316 aa13.13□□□□□ -0.31
LINC00963-216ENST00000623185 NECTIN4Q96NY8 510 aa13.13□□□□□ -0.31
LINC00963-216ENST00000623185 CHP1Q99653 195 aa13.13□□□□□ -0.31
LINC00963-216ENST00000623185 CORO1BQ9BR76 489 aa13.13□□□□□ -0.31
LINC00963-216ENST00000623185 WDR6Q9NNW5 1121 aaKnown RBP13.13□□□□□ -0.31
LINC00963-216ENST00000623185 CYTH4Q9UIA0 394 aa13.13□□□□□ -0.31
LINC00963-216ENST00000623185 NCANO14594 1321 aa13.13□□□□□ -0.31
LINC00963-216ENST00000623185 TRANK1O15050 2925 aa13.12□□□□□ -0.31
LINC00963-216ENST00000623185 DDX3XO00571 662 aaKnown RBP eCLIP13.12□□□□□ -0.31
LINC00963-216ENST00000623185 ZBED1O96006 694 aa13.12□□□□□ -0.31
LINC00963-216ENST00000623185 RHOP08100 348 aa13.12□□□□□ -0.31
LINC00963-216ENST00000623185 MMP8P22894 467 aa13.12□□□□□ -0.31
LINC00963-216ENST00000623185 EIF4A3P38919 411 aaKnown RBP13.12□□□□□ -0.31
LINC00963-216ENST00000623185 PSEN1P49768 467 aa13.12□□□□□ -0.31
LINC00963-216ENST00000623185 USP46P62068 366 aa13.12□□□□□ -0.31
LINC00963-216ENST00000623185 CENPCQ03188 943 aa13.12□□□□□ -0.31
LINC00963-216ENST00000623185 TAF10Q12962 218 aa13.12□□□□□ -0.31
LINC00963-216ENST00000623185 PDCLQ13371 301 aa13.12□□□□□ -0.31
LINC00963-216ENST00000623185 ZNF268Q14587 947 aaPredicted RBP13.12□□□□□ -0.31
LINC00963-216ENST00000623185 LEXMQ3ZCV2 418 aa13.12□□□□□ -0.31
LINC00963-216ENST00000623185 TDRD12Q587J7 1177 aaKnown RBP13.12□□□□□ -0.31
LINC00963-216ENST00000623185 CCDC186Q7Z3E2 898 aa13.12□□□□□ -0.31
LINC00963-216ENST00000623185 GRASPQ7Z6J2 395 aaPredicted RBP13.12□□□□□ -0.31
LINC00963-216ENST00000623185 PHF13Q86YI8 300 aaPredicted RBP13.12□□□□□ -0.31
LINC00963-216ENST00000623185 TMC8Q8IU68 726 aa13.12□□□□□ -0.31
LINC00963-216ENST00000623185 PASD1Q8IV76 773 aa13.12□□□□□ -0.31
LINC00963-216ENST00000623185 SCUBE3Q8IX30 993 aa13.12□□□□□ -0.31
LINC00963-216ENST00000623185 CCDC170Q8IYT3 715 aa13.12□□□□□ -0.31
LINC00963-216ENST00000623185 MSANTD4Q8NCY6 345 aa13.12□□□□□ -0.31
LINC00963-216ENST00000623185 PDZD8Q8NEN9 1154 aa13.12□□□□□ -0.31
LINC00963-216ENST00000623185 OLIG1Q8TAK6 271 aa13.12□□□□□ -0.31
LINC00963-216ENST00000623185 IRGQQ8WZA9 623 aa13.12□□□□□ -0.31
LINC00963-216ENST00000623185 SUSD6Q92537 303 aa13.12□□□□□ -0.31
LINC00963-216ENST00000623185 C18orf8Q96DM3 657 aa13.12□□□□□ -0.31
LINC00963-216ENST00000623185 SLITRK1Q96PX8 696 aa13.12□□□□□ -0.31
LINC00963-216ENST00000623185 CPXM1Q96SM3 734 aa13.12□□□□□ -0.31
LINC00963-216ENST00000623185 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.12□□□□□ -0.31
LINC00963-216ENST00000623185 ISCUQ9H1K1 167 aa13.12□□□□□ -0.31
LINC00963-216ENST00000623185 NHEJ1Q9H9Q4 299 aaPredicted RBP13.12□□□□□ -0.31
LINC00963-216ENST00000623185 IL21Q9HBE4 155 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms