RNA–Protein interactions for RNA: ENST00000620292.4

CBWD1-229, Transcript of COBW domain containing 1, human

TSL 5

Gene CBWD1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-229	ENST00000620292	TAF2	Q6P1X5	1199 aa		4.63	□□□□□ -1.67
CBWD1-229	ENST00000620292	SRGAP1	Q7Z6B7	1085 aa		4.63	□□□□□ -1.67
CBWD1-229	ENST00000620292	CELF5	Q8N6W0	485 aa	Known RBP	4.63	□□□□□ -1.67
CBWD1-229	ENST00000620292	PSD4	Q8NDX1	1056 aa		4.63	□□□□□ -1.67
CBWD1-229	ENST00000620292	ANKS1A	Q92625	1134 aa		4.63	□□□□□ -1.67
CBWD1-229	ENST00000620292	AIFM2	Q9BRQ8	373 aa		4.63	□□□□□ -1.67
CBWD1-229	ENST00000620292	SPATA5L1	Q9BVQ7	753 aa		4.63	□□□□□ -1.67
CBWD1-229	ENST00000620292	ARMT1	Q9H993	441 aa		4.63	□□□□□ -1.67
CBWD1-229	ENST00000620292	ZMAT3	Q9HA38	289 aa	Known RBP	4.63	□□□□□ -1.67
CBWD1-229	ENST00000620292	CASS4	Q9NQ75	786 aa		4.63	□□□□□ -1.67
CBWD1-229	ENST00000620292	HESX1	Q9UBX0	185 aa		4.63	□□□□□ -1.67
CBWD1-229	ENST00000620292	RPGRIP1L	Q68CZ1	1315 aa		4.63	□□□□□ -1.67
CBWD1-229	ENST00000620292	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	4.62	□□□□□ -1.67
CBWD1-229	ENST00000620292	CAPN8	A6NHC0	703 aa		4.62	□□□□□ -1.67
CBWD1-229	ENST00000620292		A6NNZ2	444 aa		4.62	□□□□□ -1.67
CBWD1-229	ENST00000620292	MPPED1	O15442	326 aa		4.62	□□□□□ -1.67
CBWD1-229	ENST00000620292	ZBED1	O96006	694 aa		4.62	□□□□□ -1.67
CBWD1-229	ENST00000620292	LMNA	P02545	664 aa	Known RBP	4.62	□□□□□ -1.67
CBWD1-229	ENST00000620292	FOLR3	P41439	243 aa		4.62	□□□□□ -1.67
CBWD1-229	ENST00000620292	VIPR2	P41587	438 aa		4.62	□□□□□ -1.67
CBWD1-229	ENST00000620292	NDUFV1	P49821	464 aa		4.62	□□□□□ -1.67
CBWD1-229	ENST00000620292	PTPRR	Q15256	657 aa		4.62	□□□□□ -1.67
CBWD1-229	ENST00000620292	GPR162	Q16538	588 aa		4.62	□□□□□ -1.67
CBWD1-229	ENST00000620292	ARHGAP29	Q52LW3	1261 aa		4.62	□□□□□ -1.67
CBWD1-229	ENST00000620292	SWSAP1	Q6NVH7	229 aa		4.62	□□□□□ -1.67
CBWD1-229	ENST00000620292	TCP11L2	Q8N4U5	519 aa		4.62	□□□□□ -1.67
CBWD1-229	ENST00000620292	IL31RA	Q8NI17	732 aa		4.62	□□□□□ -1.67
CBWD1-229	ENST00000620292	CAVIN3	Q969G5	261 aa		4.62	□□□□□ -1.67
CBWD1-229	ENST00000620292	PGBD1	Q96JS3	809 aa		4.62	□□□□□ -1.67
CBWD1-229	ENST00000620292	C22orf23	Q9BZE7	217 aa		4.62	□□□□□ -1.67
CBWD1-229	ENST00000620292	SLITRK6	Q9H5Y7	841 aa		4.62	□□□□□ -1.67
CBWD1-229	ENST00000620292	FAM204A	Q9H8W3	233 aa		4.62	□□□□□ -1.67
CBWD1-229	ENST00000620292	OBP2A	Q9NY56	170 aa		4.62	□□□□□ -1.67
CBWD1-229	ENST00000620292	RAD54B	Q9Y620	910 aa		4.62	□□□□□ -1.67
CBWD1-229	ENST00000620292	GPRASP1	Q5JY77	1395 aa		4.62	□□□□□ -1.67
CBWD1-229	ENST00000620292	WDR90	Q96KV7	1748 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292		A0A087WWL8	130 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292		A0A0B4J269	797 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292		A0A1W2PPL8	197 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	WDR27	A2RRH5	827 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	VSTM5	A8MXK1	200 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	MYO1F	O00160	1098 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	DCLK1	O15075	740 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	TRIAP1	O43715	76 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	UNC5C	O95185	931 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	ATXN1L	P0C7T5	689 aa	Known RBP	4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	EN2	P19622	333 aa	Predicted RBP	4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	GCLC	P48506	637 aa	Predicted RBP	4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	CACNB3	P54284	484 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	WNT3	P56703	355 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	NXPH1	P58417	271 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	ITIH3	Q06033	890 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	FSTL1	Q12841	308 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	TUBB3	Q13509	450 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	BOP1	Q14137	746 aa	Known RBP	4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	ZNF169	Q14929	603 aa	Predicted RBP	4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	CNN3	Q15417	329 aa	Known RBP	4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	SLC15A2	Q16348	729 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	TXNRD1	Q16881	649 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	KRTAP15-1	Q3LI76	137 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	PREPL	Q4J6C6	727 aa	Predicted RBP	4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	AMOT	Q4VCS5	1084 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	PRR16	Q569H4	304 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	SLC30A10	Q6XR72	485 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	C14orf80	Q86SX3	495 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	FMNL3	Q8IVF7	1028 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	SLC44A3	Q8N4M1	653 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	PCSK9	Q8NBP7	692 aa	Known RBP	4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	FAM46D	Q8NEK8	389 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	SLC30A5	Q8TAD4	765 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	LPIN2	Q92539	896 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	PDLIM2	Q96JY6	352 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	NT5C1B	Q96P26	610 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	MOGAT1	Q96PD6	335 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	NELL2	Q99435	816 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	AMBRA1	Q9C0C7	1298 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	SMOC2	Q9H3U7	446 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	SYNPO2L	Q9H987	977 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	FOXJ2	Q9P0K8	574 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	STAP2	Q9UGK3	403 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	DDX20	Q9UHI6	824 aa	Known RBP	4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	CPA4	Q9UI42	421 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	PAXBP1	Q9Y5B6	917 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	MAP3K5	Q99683	1374 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	PIK3C2A	O00443	1686 aa		4.61	□□□□□ -1.67
CBWD1-229	ENST00000620292	ISM1	B1AKI9	464 aa		4.6	□□□□□ -1.67
CBWD1-229	ENST00000620292	YY2	O15391	372 aa		4.6	□□□□□ -1.67
CBWD1-229	ENST00000620292	PEX1	O43933	1283 aa		4.6	□□□□□ -1.67
CBWD1-229	ENST00000620292	PARN	O95453	639 aa	Known RBP	4.6	□□□□□ -1.67
CBWD1-229	ENST00000620292	GRP	P07492	148 aa		4.6	□□□□□ -1.67
CBWD1-229	ENST00000620292	CYP2C9	P11712	490 aa		4.6	□□□□□ -1.67
CBWD1-229	ENST00000620292	PPP3CB	P16298	524 aa		4.6	□□□□□ -1.67
CBWD1-229	ENST00000620292	ITGAL	P20701	1170 aa		4.6	□□□□□ -1.67
CBWD1-229	ENST00000620292	KCNJ5	P48544	419 aa		4.6	□□□□□ -1.67
CBWD1-229	ENST00000620292	LOXL3	P58215	753 aa		4.6	□□□□□ -1.67
CBWD1-229	ENST00000620292	LONRF3	Q496Y0	759 aa		4.6	□□□□□ -1.67
CBWD1-229	ENST00000620292	SFRP4	Q6FHJ7	346 aa	Predicted RBP	4.6	□□□□□ -1.67
CBWD1-229	ENST00000620292	OLFML1	Q6UWY5	402 aa		4.6	□□□□□ -1.67
CBWD1-229	ENST00000620292	COL23A1	Q86Y22	540 aa	Predicted RBP	4.6	□□□□□ -1.67

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