RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 PURAQ00577 322 aaKnown RBP22.94■■□□□ 1.26
POLR2J3-220ENST00000613744 ZNF365Q70YC5 407 aa22.94■■□□□ 1.26
POLR2J3-220ENST00000613744 RNF180Q86T96 592 aa22.94■■□□□ 1.26
POLR2J3-220ENST00000613744 NOP9Q86U38 636 aaKnown RBP22.94■■□□□ 1.26
POLR2J3-220ENST00000613744 SEL1LQ9UBV2 794 aa22.94■■□□□ 1.26
POLR2J3-220ENST00000613744 GRID1Q9ULK0 1009 aa22.94■■□□□ 1.26
POLR2J3-220ENST00000613744 MTO1Q9Y2Z2 717 aaKnown RBP22.94■■□□□ 1.26
POLR2J3-220ENST00000613744 RPS6KL1Q9Y6S9 549 aa22.94■■□□□ 1.26
POLR2J3-220ENST00000613744 STBD1O95210 358 aa22.94■■□□□ 1.26
POLR2J3-220ENST00000613744 PIM1P11309 404 aaPredicted RBP22.94■■□□□ 1.26
POLR2J3-220ENST00000613744 CA4P22748 312 aa22.94■■□□□ 1.26
POLR2J3-220ENST00000613744 CETN1Q12798 172 aa22.94■■□□□ 1.26
POLR2J3-220ENST00000613744 RINT1Q6NUQ1 792 aa22.94■■□□□ 1.26
POLR2J3-220ENST00000613744 PLPPR4Q7Z2D5 763 aa22.94■■□□□ 1.26
POLR2J3-220ENST00000613744 SLC9A9Q8IVB4 645 aa22.94■■□□□ 1.26
POLR2J3-220ENST00000613744 NME8Q8N427 588 aa22.94■■□□□ 1.26
POLR2J3-220ENST00000613744 CHST7Q9NS84 486 aa22.94■■□□□ 1.26
POLR2J3-220ENST00000613744 ERAP1Q9NZ08 941 aa22.94■■□□□ 1.26
POLR2J3-220ENST00000613744 NDUFA13Q9P0J0 144 aa22.94■■□□□ 1.26
POLR2J3-220ENST00000613744 MKI67P46013 3256 aaKnown RBP22.93■■□□□ 1.26
POLR2J3-220ENST00000613744 FRMPD3Q5JV73 1810 aa22.93■■□□□ 1.26
POLR2J3-220ENST00000613744 LYPLA2O95372 231 aa22.93■■□□□ 1.26
POLR2J3-220ENST00000613744 OATP04181 439 aa22.93■■□□□ 1.26
POLR2J3-220ENST00000613744 RARRES1P49788 294 aa22.93■■□□□ 1.26
POLR2J3-220ENST00000613744 DSG1Q02413 1049 aa22.93■■□□□ 1.26
POLR2J3-220ENST00000613744 ADCY1Q08828 1119 aa22.93■■□□□ 1.26
POLR2J3-220ENST00000613744 XKR9Q5GH70 373 aa22.93■■□□□ 1.26
POLR2J3-220ENST00000613744 ST13P4Q8IZP2 240 aaPredicted RBP22.93■■□□□ 1.26
POLR2J3-220ENST00000613744 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.93■■□□□ 1.26
POLR2J3-220ENST00000613744 PPP2R3CQ969Q6 453 aa22.93■■□□□ 1.26
POLR2J3-220ENST00000613744 ZCWPW1Q9H0M4 648 aa22.93■■□□□ 1.26
POLR2J3-220ENST00000613744 FETUBQ9UGM5 382 aa22.93■■□□□ 1.26
POLR2J3-220ENST00000613744 NDC80O14777 642 aa22.93■■□□□ 1.26
POLR2J3-220ENST00000613744 TGDSO95455 350 aa22.93■■□□□ 1.26
POLR2J3-220ENST00000613744 CRABP2P29373 138 aa22.93■■□□□ 1.26
POLR2J3-220ENST00000613744 RPA3P35244 121 aaPredicted RBP22.93■■□□□ 1.26
POLR2J3-220ENST00000613744 IZUMO3Q5VZ72 239 aa22.93■■□□□ 1.26
POLR2J3-220ENST00000613744 CCSAPQ6IQ19 270 aaPredicted RBP22.93■■□□□ 1.26
POLR2J3-220ENST00000613744 MARK2Q7KZI7 788 aaKnown RBP22.93■■□□□ 1.26
POLR2J3-220ENST00000613744 TRAPPC12Q8WVT3 735 aa22.93■■□□□ 1.26
POLR2J3-220ENST00000613744 TRIM55Q9BYV6 548 aa22.93■■□□□ 1.26
POLR2J3-220ENST00000613744 OSBPL8Q9BZF1 889 aa22.93■■□□□ 1.26
POLR2J3-220ENST00000613744 NPHS2Q9NP85 383 aa22.93■■□□□ 1.26
POLR2J3-220ENST00000613744 ARL8BQ9NVJ2 186 aa22.93■■□□□ 1.26
POLR2J3-220ENST00000613744 DNAJC17Q9NVM6 304 aaKnown RBP22.93■■□□□ 1.26
POLR2J3-220ENST00000613744 DKC1O60832 514 aaKnown RBP eCLIP22.92■■□□□ 1.26
POLR2J3-220ENST00000613744 LRRN2O75325 713 aa22.92■■□□□ 1.26
POLR2J3-220ENST00000613744 PABPC4LP0CB38 370 aaKnown RBP22.92■■□□□ 1.26
POLR2J3-220ENST00000613744 KRT15P19012 456 aa22.92■■□□□ 1.26
POLR2J3-220ENST00000613744 IGBP1P78318 339 aa22.92■■□□□ 1.26
POLR2J3-220ENST00000613744 BFSP1Q12934 665 aa22.92■■□□□ 1.26
POLR2J3-220ENST00000613744 PTP4A2Q12974 167 aa22.92■■□□□ 1.26
POLR2J3-220ENST00000613744 SLC1A5Q15758 541 aa22.92■■□□□ 1.26
POLR2J3-220ENST00000613744 CCNG2Q16589 344 aa22.92■■□□□ 1.26
POLR2J3-220ENST00000613744 MTERF2Q49AM1 385 aa22.92■■□□□ 1.26
POLR2J3-220ENST00000613744 PADI6Q6TGC4 694 aa22.92■■□□□ 1.26
POLR2J3-220ENST00000613744 CEP170P1Q96L14 293 aa22.92■■□□□ 1.26
POLR2J3-220ENST00000613744 C9orf72Q96LT7 481 aa22.92■■□□□ 1.26
POLR2J3-220ENST00000613744 RBM15Q96T37 977 aaKnown RBP eCLIP22.92■■□□□ 1.26
POLR2J3-220ENST00000613744 EPB41L1Q9H4G0 881 aa22.92■■□□□ 1.26
POLR2J3-220ENST00000613744 RSPH10B2B2RC85 870 aa22.91■■□□□ 1.26
POLR2J3-220ENST00000613744 ZSCAN9O15535 394 aaPredicted RBP22.91■■□□□ 1.26
POLR2J3-220ENST00000613744 RSPH10BP0C881 870 aa22.91■■□□□ 1.26
POLR2J3-220ENST00000613744 CETN2P41208 172 aa22.91■■□□□ 1.26
POLR2J3-220ENST00000613744 SLC1A1P43005 524 aa22.91■■□□□ 1.26
POLR2J3-220ENST00000613744 MYBPC3Q14896 1274 aa22.91■■□□□ 1.26
POLR2J3-220ENST00000613744 XKR3Q5GH77 459 aa22.91■■□□□ 1.26
POLR2J3-220ENST00000613744 SKA1Q96BD8 255 aa22.91■■□□□ 1.26
POLR2J3-220ENST00000613744 VPS11Q9H270 941 aa22.91■■□□□ 1.26
POLR2J3-220ENST00000613744 UBE2TQ9NPD8 197 aaPredicted RBP22.91■■□□□ 1.26
POLR2J3-220ENST00000613744 KANSL3Q9P2N6 904 aa22.91■■□□□ 1.26
POLR2J3-220ENST00000613744 NOCTQ9UK39 431 aaKnown RBP22.91■■□□□ 1.26
POLR2J3-220ENST00000613744 SFI1A8K8P3 1242 aa22.91■■□□□ 1.26
POLR2J3-220ENST00000613744 FAM13AO94988 1023 aa22.91■■□□□ 1.26
POLR2J3-220ENST00000613744 F2P00734 622 aa22.91■■□□□ 1.26
POLR2J3-220ENST00000613744 RRM1P23921 792 aa22.91■■□□□ 1.26
POLR2J3-220ENST00000613744 KCNA1Q09470 495 aa22.91■■□□□ 1.26
POLR2J3-220ENST00000613744 MAP7Q14244 749 aa22.91■■□□□ 1.26
POLR2J3-220ENST00000613744 MFSD10Q14728 455 aa22.91■■□□□ 1.26
POLR2J3-220ENST00000613744 C1orf186Q6ZWK4 172 aa22.91■■□□□ 1.26
POLR2J3-220ENST00000613744 NET1Q7Z628 596 aaPredicted RBP22.91■■□□□ 1.26
POLR2J3-220ENST00000613744 KBTBD2Q8IY47 623 aa22.91■■□□□ 1.26
POLR2J3-220ENST00000613744 PCDHB18PQ96TA0 734 aa22.91■■□□□ 1.26
POLR2J3-220ENST00000613744 TM9SF1O15321 606 aa22.9■■□□□ 1.26
POLR2J3-220ENST00000613744 IL1BP01584 269 aa22.9■■□□□ 1.26
POLR2J3-220ENST00000613744 CST5P28325 142 aaPredicted RBP22.9■■□□□ 1.26
POLR2J3-220ENST00000613744 PSEN2P49810 448 aa22.9■■□□□ 1.26
POLR2J3-220ENST00000613744 ACLYP53396 1101 aa22.9■■□□□ 1.26
POLR2J3-220ENST00000613744 RPL26P61254 145 aaKnown RBP22.9■■□□□ 1.26
POLR2J3-220ENST00000613744 NKX3-2P78367 333 aa22.9■■□□□ 1.26
POLR2J3-220ENST00000613744 CDK16Q00536 496 aa22.9■■□□□ 1.26
POLR2J3-220ENST00000613744 HNRNPDQ14103 355 aaKnown RBP22.9■■□□□ 1.26
POLR2J3-220ENST00000613744 CCDC142Q17RM4 750 aa22.9■■□□□ 1.26
POLR2J3-220ENST00000613744 TRMT5Q32P41 509 aaKnown RBP22.9■■□□□ 1.26
POLR2J3-220ENST00000613744 LVRNQ6Q4G3 990 aa22.9■■□□□ 1.26
POLR2J3-220ENST00000613744 ADGRG6Q86SQ4 1221 aa22.9■■□□□ 1.26
POLR2J3-220ENST00000613744 PDCD7Q8N8D1 485 aaKnown RBP22.9■■□□□ 1.26
POLR2J3-220ENST00000613744 PCSK9Q8NBP7 692 aaKnown RBP22.9■■□□□ 1.26
POLR2J3-220ENST00000613744 ARRDC4Q8NCT1 418 aa22.9■■□□□ 1.26
POLR2J3-220ENST00000613744 EPS8L1Q8TE68 723 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms