RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 CD163L1Q9NR16 1453 aa18.02■□□□□ 0.47
HMGXB3-206ENST00000613459 CES2O00748 559 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 MAPTP10636 758 aaKnown RBP18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 ATP6V1B1P15313 513 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 TCF3P15923 654 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 MROH9Q5TGP6 573 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 PRR5LQ6MZQ0 368 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 C1orf131Q8NDD1 294 aaKnown RBP18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 CGRRF1Q99675 332 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 SEPT5Q99719 369 aaPredicted RBP18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 PRRG3Q9BZD7 231 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 THAP2Q9H0W7 228 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 CNOT7Q9UIV1 285 aaKnown RBP18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 GHRP10912 638 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 ALDH1A3P47895 512 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 RPS6P62753 249 aaKnown RBP18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 ZNF333Q96JL9 665 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 DCLRE1BQ9H816 532 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 IMPAD1Q9NX62 359 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 RNF103O00237 685 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 CETPP11597 493 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 TAF1CQ15572 869 aaPredicted RBP18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 CAVIN3Q969G5 261 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 BRD8Q9H0E9 1235 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 DSEQ9UL01 958 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 NCAM2O15394 837 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 PTPN7P35236 360 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 BNC2Q6ZN30 1099 aaPredicted RBP18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 GPRC5AQ8NFJ5 357 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 MDM1Q8TC05 714 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 C19orf60Q96EN9 201 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 COLEC11Q9BWP8 271 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 ADGRA2Q96PE1 1338 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 SAC3D1A6NKF1 404 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 CTDNEP1O95476 244 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 EIF2S1P05198 315 aaKnown RBP18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 CPA2P48052 419 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 PEX5P50542 639 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 CHRNB3Q05901 458 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 DNAJC3Q13217 504 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 SDE2Q6IQ49 451 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 C11orf63Q6NUN7 778 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 MARCH10Q8NA82 808 aaPredicted RBP18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 PNKPQ96T60 521 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 LBHD1Q9BQE6 289 aaPredicted RBP18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 SYTL2Q9HCH5 934 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 TAGLN3Q9UI15 199 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 SPACA6W5XKT8 324 aa18.01■□□□□ 0.47
HMGXB3-206ENST00000613459 F8W810 466 aa18■□□□□ 0.47
HMGXB3-206ENST00000613459 NTSR2O95665 410 aa18■□□□□ 0.47
HMGXB3-206ENST00000613459 GRB10Q13322 594 aa18■□□□□ 0.47
HMGXB3-206ENST00000613459 CCNG2Q16589 344 aa18■□□□□ 0.47
HMGXB3-206ENST00000613459 CCDC81Q6ZN84 652 aa18■□□□□ 0.47
HMGXB3-206ENST00000613459 AGBL3Q8NEM8 1001 aa18■□□□□ 0.47
HMGXB3-206ENST00000613459 PIK3R5Q8WYR1 880 aa18■□□□□ 0.47
HMGXB3-206ENST00000613459 KLF6Q99612 283 aaPredicted RBP18■□□□□ 0.47
HMGXB3-206ENST00000613459 WDCPQ9H6R7 721 aa18■□□□□ 0.47
HMGXB3-206ENST00000613459 HEY2Q9UBP5 337 aa18■□□□□ 0.47
HMGXB3-206ENST00000613459 HPS5Q9UPZ3 1129 aa18■□□□□ 0.47
HMGXB3-206ENST00000613459 CAMSAP1Q5T5Y3 1602 aa18■□□□□ 0.47
HMGXB3-206ENST00000613459 EPHB2P29323 1055 aa18■□□□□ 0.47
HMGXB3-206ENST00000613459 MGAT5BQ3V5L5 792 aa18■□□□□ 0.47
HMGXB3-206ENST00000613459 ARMC6Q6NXE6 501 aa18■□□□□ 0.47
HMGXB3-206ENST00000613459 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18■□□□□ 0.475e-11■■■■□ 22.4
HMGXB3-206ENST00000613459 UBA3Q8TBC4 463 aa18■□□□□ 0.47
HMGXB3-206ENST00000613459 EMILIN2Q9BXX0 1053 aa18■□□□□ 0.47
HMGXB3-206ENST00000613459 CNTNAP4Q9C0A0 1308 aa18■□□□□ 0.47
HMGXB3-206ENST00000613459 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18■□□□□ 0.47
HMGXB3-206ENST00000613459 NPTXRO95502 500 aa18■□□□□ 0.47
HMGXB3-206ENST00000613459 SOAT1P35610 550 aa18■□□□□ 0.47
HMGXB3-206ENST00000613459 KCNJ1P48048 391 aa18■□□□□ 0.47
HMGXB3-206ENST00000613459 ZNF177Q13360 481 aaPredicted RBP18■□□□□ 0.47
HMGXB3-206ENST00000613459 SNRNP27Q8WVK2 155 aaKnown RBP18■□□□□ 0.47
HMGXB3-206ENST00000613459 FAM153AQ9UHL3 310 aa18■□□□□ 0.47
HMGXB3-206ENST00000613459 MAGEB16A2A368 324 aa18■□□□□ 0.47
HMGXB3-206ENST00000613459 MSH4O15457 936 aa18■□□□□ 0.47
HMGXB3-206ENST00000613459 PKN2Q16513 984 aaKnown RBP18■□□□□ 0.47
HMGXB3-206ENST00000613459 OOSP2Q86WS3 158 aa18■□□□□ 0.47
HMGXB3-206ENST00000613459 SLC22A9Q8IVM8 553 aa18■□□□□ 0.47
HMGXB3-206ENST00000613459 FAM111AQ96PZ2 611 aa18■□□□□ 0.47
HMGXB3-206ENST00000613459 HMBSP08397 361 aa17.99■□□□□ 0.47
HMGXB3-206ENST00000613459 RRM2P31350 389 aa17.99■□□□□ 0.47
HMGXB3-206ENST00000613459 SLC26A2P50443 739 aa17.99■□□□□ 0.47
HMGXB3-206ENST00000613459 PTPAQ15257 358 aa17.99■□□□□ 0.47
HMGXB3-206ENST00000613459 Q4G0T1 1027 aa17.99■□□□□ 0.47
HMGXB3-206ENST00000613459 SLC26A11Q86WA9 606 aa17.99■□□□□ 0.47
HMGXB3-206ENST00000613459 GJD4Q96KN9 370 aaPredicted RBP17.99■□□□□ 0.47
HMGXB3-206ENST00000613459 IL1RL2Q9HB29 575 aa17.99■□□□□ 0.47
HMGXB3-206ENST00000613459 RPS6KL1Q9Y6S9 549 aa17.99■□□□□ 0.47
HMGXB3-206ENST00000613459 ATMINO43313 823 aaPredicted RBP17.99■□□□□ 0.47
HMGXB3-206ENST00000613459 GRAP2O75791 330 aa17.99■□□□□ 0.47
HMGXB3-206ENST00000613459 CAPZA2P47755 286 aa17.99■□□□□ 0.47
HMGXB3-206ENST00000613459 C10orf120Q5SQS8 335 aa17.99■□□□□ 0.47
HMGXB3-206ENST00000613459 MPZL3Q6UWV2 235 aa17.99■□□□□ 0.47
HMGXB3-206ENST00000613459 RBM43Q6ZSC3 357 aaKnown RBP17.99■□□□□ 0.47
HMGXB3-206ENST00000613459 ZBTB10Q96DT7 871 aa17.99■□□□□ 0.47
HMGXB3-206ENST00000613459 TARS2Q9BW92 718 aaKnown RBP17.99■□□□□ 0.47
HMGXB3-206ENST00000613459 USE1Q9NZ43 259 aa17.99■□□□□ 0.47
HMGXB3-206ENST00000613459 RNF112Q9ULX5 631 aa17.99■□□□□ 0.47
HMGXB3-206ENST00000613459 ALOX15P16050 662 aaPredicted RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms