RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 TRIM67Q6ZTA4 783 aa12.96□□□□□ -0.33
CDCA3-212ENST00000604599 ZNF554Q86TJ5 538 aa12.96□□□□□ -0.33
CDCA3-212ENST00000604599 HPS6Q86YV9 775 aa12.96□□□□□ -0.33
CDCA3-212ENST00000604599 CRLF3Q8IUI8 442 aa12.96□□□□□ -0.33
CDCA3-212ENST00000604599 C1orf112Q9NSG2 853 aa12.96□□□□□ -0.33
CDCA3-212ENST00000604599 BTBD7Q9P203 1132 aa12.96□□□□□ -0.33
CDCA3-212ENST00000604599 XPO7Q9UIA9 1087 aaKnown RBP12.96□□□□□ -0.33
CDCA3-212ENST00000604599 DRG1Q9Y295 367 aaKnown RBP12.96□□□□□ -0.33
CDCA3-212ENST00000604599 COQ4Q9Y3A0 265 aa12.96□□□□□ -0.33
CDCA3-212ENST00000604599 HBS1LQ9Y450 684 aaKnown RBP12.96□□□□□ -0.33
CDCA3-212ENST00000604599 DTNAQ9Y4J8 743 aa12.96□□□□□ -0.33
CDCA3-212ENST00000604599 RBBP6Q7Z6E9 1792 aaKnown RBP12.96□□□□□ -0.33
CDCA3-212ENST00000604599 FOCADQ5VW36 1801 aa12.96□□□□□ -0.33
CDCA3-212ENST00000604599 hCG_1818297A0A087WSY0 165 aa12.96□□□□□ -0.33
CDCA3-212ENST00000604599 PMM2O15305 246 aa12.96□□□□□ -0.33
CDCA3-212ENST00000604599 KCNQ2O43526 872 aa12.96□□□□□ -0.33
CDCA3-212ENST00000604599 ABCD1P33897 745 aa12.96□□□□□ -0.33
CDCA3-212ENST00000604599 IRX4P78413 519 aa12.96□□□□□ -0.33
CDCA3-212ENST00000604599 SULT2A1Q06520 285 aa12.96□□□□□ -0.33
CDCA3-212ENST00000604599 IYDQ6PHW0 289 aa12.96□□□□□ -0.33
CDCA3-212ENST00000604599 NUDCD3Q8IVD9 361 aa12.96□□□□□ -0.33
CDCA3-212ENST00000604599 PIP4K2CQ8TBX8 421 aa12.96□□□□□ -0.33
CDCA3-212ENST00000604599 DCAF4Q8WV16 495 aa12.96□□□□□ -0.33
CDCA3-212ENST00000604599 SLC44A1Q8WWI5 657 aa12.96□□□□□ -0.33
CDCA3-212ENST00000604599 NKD2Q969F2 451 aaPredicted RBP12.96□□□□□ -0.33
CDCA3-212ENST00000604599 CNBD2Q96M20 576 aa12.96□□□□□ -0.33
CDCA3-212ENST00000604599 PRPF18Q99633 342 aaKnown RBP12.96□□□□□ -0.33
CDCA3-212ENST00000604599 APOL6Q9BWW8 343 aa12.96□□□□□ -0.33
CDCA3-212ENST00000604599 MRPL1Q9BYD6 325 aaKnown RBP12.96□□□□□ -0.33
CDCA3-212ENST00000604599 RBM38Q9H0Z9 239 aaKnown RBP12.96□□□□□ -0.33
CDCA3-212ENST00000604599 XIAPP98170 497 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 GRAPQ13588 217 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 BMPR2Q13873 1038 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 TFDP3Q5H9I0 405 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 ATG16L1Q676U5 607 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 SPOPLQ6IQ16 392 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 PCGF5Q86SE9 256 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 RNF168Q8IYW5 571 aaPredicted RBP12.95□□□□□ -0.34
CDCA3-212ENST00000604599 PPM1NQ8N819 430 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 GRAPLQ8TC17 118 aaPredicted RBP12.95□□□□□ -0.34
CDCA3-212ENST00000604599 ACTL9Q8TC94 416 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 SENP7Q9BQF6 1050 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 TMOD2Q9NZR1 351 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 CDH22Q9UJ99 828 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 ZNF711Q9Y462 761 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 PPME1Q9Y570 386 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 MAD1L1Q9Y6D9 718 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 BOLA2-SMG1P6H3BVE0 249 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 AP1G1O43747 822 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 CCNT2O60583 730 aaKnown RBP12.95□□□□□ -0.34
CDCA3-212ENST00000604599 FUT4P22083 530 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 SLC5A2P31639 672 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 RPL22P35268 128 aaKnown RBP12.95□□□□□ -0.34
CDCA3-212ENST00000604599 NOMO3P69849 1222 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 GTF2IP78347 998 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 MRPS5P82675 430 aaKnown RBP12.95□□□□□ -0.34
CDCA3-212ENST00000604599 OTUD4Q01804 1114 aaKnown RBP12.95□□□□□ -0.34
CDCA3-212ENST00000604599 SNAPC2Q13487 334 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 TEX44Q53QW1 395 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 FEZF2Q8TBJ5 459 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 DCUN1D1Q96GG9 259 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 PACSIN3Q9UKS6 424 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 ZNRF3Q9ULT6 936 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 POMPQ9Y244 141 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 HEMK1Q9Y5R4 338 aaPredicted RBP12.95□□□□□ -0.34
CDCA3-212ENST00000604599 E7ESA3 106 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 STRNO43815 780 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 TOP3BO95985 862 aaKnown RBP12.95□□□□□ -0.34
CDCA3-212ENST00000604599 AOC1P19801 751 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 SERPINB8P50452 374 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 COPAP53621 1224 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 ZNF252P-AS1Q0IIN9 211 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 TBCCQ15814 346 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 CNGA3Q16281 694 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 SMTNL2Q2TAL5 461 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 PLEKHA7Q6IQ23 1121 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 LRRC8BQ6P9F7 803 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 KLHL35Q6PF15 583 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 TSHZ1Q6ZSZ6 1077 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 CFAP36Q96G28 342 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 BTBD9Q96Q07 612 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 SENP6Q9GZR1 1112 aaPredicted RBP12.95□□□□□ -0.34
CDCA3-212ENST00000604599 DMTF1Q9Y222 760 aa12.95□□□□□ -0.34
CDCA3-212ENST00000604599 SF3B1O75533 1304 aaKnown RBP eCLIP12.94□□□□□ -0.34
CDCA3-212ENST00000604599 SDR42E2A6NKP2 422 aa12.94□□□□□ -0.34
CDCA3-212ENST00000604599 BTBD19C9JJ37 291 aa12.94□□□□□ -0.34
CDCA3-212ENST00000604599 AVILO75366 819 aa12.94□□□□□ -0.34
CDCA3-212ENST00000604599 ZMPSTE24O75844 475 aa12.94□□□□□ -0.34
CDCA3-212ENST00000604599 HLA-DOAP06340 250 aa12.94□□□□□ -0.34
CDCA3-212ENST00000604599 WEE2P0C1S8 567 aa12.94□□□□□ -0.34
CDCA3-212ENST00000604599 ALDH1A3P47895 512 aa12.94□□□□□ -0.34
CDCA3-212ENST00000604599 SCNN1DP51172 638 aa12.94□□□□□ -0.34
CDCA3-212ENST00000604599 GCNT1Q02742 428 aa12.94□□□□□ -0.34
CDCA3-212ENST00000604599 NFIAQ12857 509 aa12.94□□□□□ -0.34
CDCA3-212ENST00000604599 MPP3Q13368 585 aa12.94□□□□□ -0.34
CDCA3-212ENST00000604599 ZFPM1Q8IX07 1006 aa12.94□□□□□ -0.34
CDCA3-212ENST00000604599 DEFB107AQ8IZN7 70 aa12.94□□□□□ -0.34
CDCA3-212ENST00000604599 SLC35B2Q8TB61 432 aa12.94□□□□□ -0.34
CDCA3-212ENST00000604599 RSAD2Q8WXG1 361 aa12.94□□□□□ -0.34
CDCA3-212ENST00000604599 MCEEQ96PE7 176 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms