RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 ARL14EPQ8N8R7 260 aaPredicted RBP17.7■□□□□ 0.42
SSBP4-213ENST00000602088 PDZD8Q8NEN9 1154 aa17.7■□□□□ 0.42
SSBP4-213ENST00000602088 OVCA2Q8WZ82 227 aa17.7■□□□□ 0.42
SSBP4-213ENST00000602088 KAT5Q92993 513 aa17.7■□□□□ 0.42
SSBP4-213ENST00000602088 FBXO32Q969P5 355 aa17.7■□□□□ 0.42
SSBP4-213ENST00000602088 DDX23Q9BUQ8 820 aaKnown RBP17.7■□□□□ 0.42
SSBP4-213ENST00000602088 DUSP16Q9BY84 665 aa17.7■□□□□ 0.42
SSBP4-213ENST00000602088 INTS2Q9H0H0 1204 aaKnown RBP17.7■□□□□ 0.42
SSBP4-213ENST00000602088 TBC1D17Q9HA65 648 aa17.7■□□□□ 0.42
SSBP4-213ENST00000602088 KIF9Q9HAQ2 790 aa17.7■□□□□ 0.42
SSBP4-213ENST00000602088 PNPLA8Q9NP80 782 aa17.7■□□□□ 0.42
SSBP4-213ENST00000602088 HEBP1Q9NRV9 189 aa17.7■□□□□ 0.42
SSBP4-213ENST00000602088 HCN4Q9Y3Q4 1203 aa17.7■□□□□ 0.42
SSBP4-213ENST00000602088 KMT2EQ8IZD2 1858 aa17.69■□□□□ 0.42
SSBP4-213ENST00000602088 STK25O00506 426 aa17.69■□□□□ 0.42
SSBP4-213ENST00000602088 CKMP06732 381 aa17.69■□□□□ 0.42
SSBP4-213ENST00000602088 PFKLP17858 780 aa17.69■□□□□ 0.42
SSBP4-213ENST00000602088 AOC1P19801 751 aa17.69■□□□□ 0.42
SSBP4-213ENST00000602088 ARHGAP29Q52LW3 1261 aa17.69■□□□□ 0.42
SSBP4-213ENST00000602088 SNX30Q5VWJ9 437 aa17.69■□□□□ 0.42
SSBP4-213ENST00000602088 SASS6Q6UVJ0 657 aa17.69■□□□□ 0.42
SSBP4-213ENST00000602088 RRAGAQ7L523 313 aa17.69■□□□□ 0.42
SSBP4-213ENST00000602088 TMEM105Q8N8V8 129 aa17.69■□□□□ 0.42
SSBP4-213ENST00000602088 FBXO44Q9H4M3 255 aa17.69■□□□□ 0.42
SSBP4-213ENST00000602088 SAMSN1Q9NSI8 373 aaKnown RBP17.69■□□□□ 0.42
SSBP4-213ENST00000602088 THG1LQ9NWX6 298 aaKnown RBP17.69■□□□□ 0.42
SSBP4-213ENST00000602088 TMEM63CQ9P1W3 806 aa17.69■□□□□ 0.42
SSBP4-213ENST00000602088 CHORDC1Q9UHD1 332 aaPredicted RBP17.69■□□□□ 0.42
SSBP4-213ENST00000602088 KIAA1257Q9ULG3 409 aa17.69■□□□□ 0.42
SSBP4-213ENST00000602088 COL4A2P08572 1712 aa17.68■□□□□ 0.42
SSBP4-213ENST00000602088 ZDHHC11BP0C7U3 371 aa17.68■□□□□ 0.42
SSBP4-213ENST00000602088 VDRP11473 427 aa17.68■□□□□ 0.42
SSBP4-213ENST00000602088 PDE6CP51160 858 aa17.68■□□□□ 0.42
SSBP4-213ENST00000602088 MAN2A1Q16706 1144 aa17.68■□□□□ 0.42
SSBP4-213ENST00000602088 SGO2Q562F6 1265 aa17.68■□□□□ 0.42
SSBP4-213ENST00000602088 HSP90AA4PQ58FG1 418 aa17.68■□□□□ 0.42
SSBP4-213ENST00000602088 TMEM270Q6UE05 265 aa17.68■□□□□ 0.42
SSBP4-213ENST00000602088 GBP6Q6ZN66 633 aa17.68■□□□□ 0.42
SSBP4-213ENST00000602088 GPRIN1Q7Z2K8 1008 aa17.68■□□□□ 0.42
SSBP4-213ENST00000602088 RIN3Q8TB24 985 aa17.68■□□□□ 0.42
SSBP4-213ENST00000602088 ENOX1Q8TC92 643 aaKnown RBP17.68■□□□□ 0.42
SSBP4-213ENST00000602088 ZFYVE19Q96K21 471 aa17.68■□□□□ 0.42
SSBP4-213ENST00000602088 KREMEN1Q96MU8 473 aa17.68■□□□□ 0.42
SSBP4-213ENST00000602088 CRACR2AQ9BSW2 395 aa17.68■□□□□ 0.42
SSBP4-213ENST00000602088 RNF38Q9H0F5 515 aa17.68■□□□□ 0.42
SSBP4-213ENST00000602088 KCNH6Q9H252 994 aa17.68■□□□□ 0.42
SSBP4-213ENST00000602088 ANO10Q9NW15 660 aa17.68■□□□□ 0.42
SSBP4-213ENST00000602088 PCDHB4Q9Y5E5 795 aa17.68■□□□□ 0.42
SSBP4-213ENST00000602088 TICRRQ7Z2Z1 1910 aa17.68■□□□□ 0.42
SSBP4-213ENST00000602088 PATJQ8NI35 1801 aa17.68■□□□□ 0.42
SSBP4-213ENST00000602088 COL4A3Q01955 1670 aa17.67■□□□□ 0.42
SSBP4-213ENST00000602088 MUC6Q6W4X9 2439 aa17.67■□□□□ 0.42
SSBP4-213ENST00000602088 KANSL1LA0AUZ9 987 aa17.67■□□□□ 0.42
SSBP4-213ENST00000602088 GTPBP10A4D1E9 387 aaKnown RBP17.67■□□□□ 0.42
SSBP4-213ENST00000602088 SHISA7A6NL88 538 aa17.67■□□□□ 0.42
SSBP4-213ENST00000602088 RNF225M0QZC1 329 aaPredicted RBP17.67■□□□□ 0.42
SSBP4-213ENST00000602088 OLFM2O95897 454 aa17.67■□□□□ 0.42
SSBP4-213ENST00000602088 ABL1P00519 1130 aa17.67■□□□□ 0.42
SSBP4-213ENST00000602088 OAS1P00973 400 aaKnown RBP17.67■□□□□ 0.42
SSBP4-213ENST00000602088 PAEPP09466 180 aa17.67■□□□□ 0.42
SSBP4-213ENST00000602088 SLC9A1P19634 815 aa17.67■□□□□ 0.42
SSBP4-213ENST00000602088 RFX1P22670 979 aa17.67■□□□□ 0.42
SSBP4-213ENST00000602088 MLLT6P55198 1093 aaPredicted RBP17.67■□□□□ 0.42
SSBP4-213ENST00000602088 PLCB2Q00722 1185 aa17.67■□□□□ 0.42
SSBP4-213ENST00000602088 EXOC3L4Q17RC7 722 aa17.67■□□□□ 0.42
SSBP4-213ENST00000602088 TRIM65Q6PJ69 517 aa17.67■□□□□ 0.42
SSBP4-213ENST00000602088 TPRG1Q6ZUI0 275 aa17.67■□□□□ 0.42
SSBP4-213ENST00000602088 C11orf57Q6ZUT1 292 aaPredicted RBP17.67■□□□□ 0.42
SSBP4-213ENST00000602088 ANKRD52Q8NB46 1076 aa17.67■□□□□ 0.42
SSBP4-213ENST00000602088 CSGALNACT1Q8TDX6 532 aa17.67■□□□□ 0.42
SSBP4-213ENST00000602088 JAKMIP2Q96AA8 810 aa17.67■□□□□ 0.42
SSBP4-213ENST00000602088 TUBGCP2Q9BSJ2 902 aa17.67■□□□□ 0.42
SSBP4-213ENST00000602088 UBXN6Q9BZV1 441 aa17.67■□□□□ 0.42
SSBP4-213ENST00000602088 NDST4Q9H3R1 872 aa17.67■□□□□ 0.42
SSBP4-213ENST00000602088 GKN1Q9NS71 199 aa17.67■□□□□ 0.42
SSBP4-213ENST00000602088 ARHGAP26Q9UNA1 814 aa17.67■□□□□ 0.42
SSBP4-213ENST00000602088 NFE2L3Q9Y4A8 694 aa17.67■□□□□ 0.42
SSBP4-213ENST00000602088 ARIH1Q9Y4X5 557 aaPredicted RBP17.67■□□□□ 0.42
SSBP4-213ENST00000602088 KIF26AQ9ULI4 1882 aaPredicted RBP17.67■□□□□ 0.42
SSBP4-213ENST00000602088 F5P12259 2224 aa17.66■□□□□ 0.42
SSBP4-213ENST00000602088 GLULP15104 373 aa17.66■□□□□ 0.42
SSBP4-213ENST00000602088 CD19P15391 556 aa17.66■□□□□ 0.42
SSBP4-213ENST00000602088 TCF3P15923 654 aa17.66■□□□□ 0.42
SSBP4-213ENST00000602088 CD72P21854 359 aa17.66■□□□□ 0.42
SSBP4-213ENST00000602088 KIF11P52732 1056 aa17.66■□□□□ 0.42
SSBP4-213ENST00000602088 SLC7A9P82251 487 aa17.66■□□□□ 0.42
SSBP4-213ENST00000602088 ZXDBP98169 803 aa17.66■□□□□ 0.42
SSBP4-213ENST00000602088 ZNF77Q15935 545 aa17.66■□□□□ 0.42
SSBP4-213ENST00000602088 STX1AQ16623 288 aa17.66■□□□□ 0.42
SSBP4-213ENST00000602088 VWA3BQ502W6 1294 aa17.66■□□□□ 0.42
SSBP4-213ENST00000602088 MIIPQ5JXC2 388 aa17.66■□□□□ 0.42
SSBP4-213ENST00000602088 TTC30AQ86WT1 665 aa17.66■□□□□ 0.42
SSBP4-213ENST00000602088 PJA1Q8NG27 643 aa17.66■□□□□ 0.42
SSBP4-213ENST00000602088 SH3RF2Q8TEC5 729 aa17.66■□□□□ 0.42
SSBP4-213ENST00000602088 TFAP2BQ92481 460 aa17.66■□□□□ 0.42
SSBP4-213ENST00000602088 FAM83CQ9BQN1 747 aa17.66■□□□□ 0.42
SSBP4-213ENST00000602088 FOXQ1Q9C009 403 aa17.66■□□□□ 0.42
SSBP4-213ENST00000602088 UBE2TQ9NPD8 197 aaPredicted RBP17.66■□□□□ 0.42
SSBP4-213ENST00000602088 GMIPQ9P107 970 aa17.66■□□□□ 0.42
SSBP4-213ENST00000602088 TSPAN16Q9UKR8 245 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms