RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 ZFYVE27Q5T4F4 411 aa13.41□□□□□ -0.26
ZNF548-210ENST00000600442 CYP4A22Q5TCH4 519 aa13.41□□□□□ -0.26
ZNF548-210ENST00000600442 LRRC38Q5VT99 294 aa13.41□□□□□ -0.26
ZNF548-210ENST00000600442 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.41□□□□□ -0.26
ZNF548-210ENST00000600442 ARCQ7LC44 396 aa13.41□□□□□ -0.26
ZNF548-210ENST00000600442 TTC30AQ86WT1 665 aa13.41□□□□□ -0.26
ZNF548-210ENST00000600442 CEP57Q86XR8 500 aa13.41□□□□□ -0.26
ZNF548-210ENST00000600442 XYLT1Q86Y38 959 aa13.41□□□□□ -0.26
ZNF548-210ENST00000600442 FUKQ8N0W3 1084 aa13.41□□□□□ -0.26
ZNF548-210ENST00000600442 CRIPAKQ8N1N5 446 aa13.41□□□□□ -0.26
ZNF548-210ENST00000600442 FUBP3Q96I24 572 aaKnown RBP eCLIP13.41□□□□□ -0.26
ZNF548-210ENST00000600442 CAPZA3Q96KX2 299 aa13.41□□□□□ -0.26
ZNF548-210ENST00000600442 ZNF558Q96NG5 402 aa13.41□□□□□ -0.26
ZNF548-210ENST00000600442 ZBED2Q9BTP6 218 aa13.41□□□□□ -0.26
ZNF548-210ENST00000600442 EPHX3Q9H6B9 360 aa13.41□□□□□ -0.26
ZNF548-210ENST00000600442 PNPLA8Q9NP80 782 aa13.41□□□□□ -0.26
ZNF548-210ENST00000600442 DMAP1Q9NPF5 467 aaPredicted RBP13.41□□□□□ -0.26
ZNF548-210ENST00000600442 KRT82Q9NSB4 513 aa13.41□□□□□ -0.26
ZNF548-210ENST00000600442 DDX56Q9NY93 547 aaKnown RBP13.41□□□□□ -0.26
ZNF548-210ENST00000600442 MTUS1Q9ULD2 1270 aa13.41□□□□□ -0.26
ZNF548-210ENST00000600442 PCDHA3Q9Y5H8 950 aa13.41□□□□□ -0.26
ZNF548-210ENST00000600442 E5RJQ4 531 aa13.4□□□□□ -0.26
ZNF548-210ENST00000600442 I3L4J1 428 aa13.4□□□□□ -0.26
ZNF548-210ENST00000600442 NCK2O43639 380 aa13.4□□□□□ -0.26
ZNF548-210ENST00000600442 ATP2C2O75185 946 aa13.4□□□□□ -0.26
ZNF548-210ENST00000600442 ERBB2P04626 1255 aa13.4□□□□□ -0.26
ZNF548-210ENST00000600442 GLI1P08151 1106 aa13.4□□□□□ -0.26
ZNF548-210ENST00000600442 KRT7P08729 469 aa13.4□□□□□ -0.26
ZNF548-210ENST00000600442 MCM3P25205 808 aa13.4□□□□□ -0.26
ZNF548-210ENST00000600442 GTF2F1P35269 517 aaKnown RBP eCLIP13.4□□□□□ -0.26
ZNF548-210ENST00000600442 SLC11A1P49279 550 aa13.4□□□□□ -0.26
ZNF548-210ENST00000600442 WDR5P61964 334 aaKnown RBP13.4□□□□□ -0.26
ZNF548-210ENST00000600442 ITIH3Q06033 890 aa13.4□□□□□ -0.26
ZNF548-210ENST00000600442 USP41Q3LFD5 358 aa13.4□□□□□ -0.26
ZNF548-210ENST00000600442 PMF1Q6P1K2 205 aa13.4□□□□□ -0.26
ZNF548-210ENST00000600442 FUT10Q6P4F1 479 aa13.4□□□□□ -0.26
ZNF548-210ENST00000600442 FAM171BQ6P995 826 aa13.4□□□□□ -0.26
ZNF548-210ENST00000600442 PHLDB2Q86SQ0 1253 aa13.4□□□□□ -0.26
ZNF548-210ENST00000600442 FAM35AQ86V20 835 aa13.4□□□□□ -0.26
ZNF548-210ENST00000600442 NIPA2Q8N8Q9 360 aa13.4□□□□□ -0.26
ZNF548-210ENST00000600442 ACTRT1Q8TDG2 376 aa13.4□□□□□ -0.26
ZNF548-210ENST00000600442 C2orf15Q8WU43 125 aaKnown RBP13.4□□□□□ -0.26
ZNF548-210ENST00000600442 TMEM169Q96HH4 297 aa13.4□□□□□ -0.26
ZNF548-210ENST00000600442 PCED1BQ96HM7 432 aa13.4□□□□□ -0.26
ZNF548-210ENST00000600442 CNPY3Q9BT09 278 aa13.4□□□□□ -0.26
ZNF548-210ENST00000600442 TTPALQ9BTX7 342 aa13.4□□□□□ -0.26
ZNF548-210ENST00000600442 B3GNT5Q9BYG0 378 aa13.4□□□□□ -0.26
ZNF548-210ENST00000600442 CACNG4Q9UBN1 327 aa13.4□□□□□ -0.26
ZNF548-210ENST00000600442 DNAJB4Q9UDY4 337 aa13.4□□□□□ -0.26
ZNF548-210ENST00000600442 SSX2IPQ9Y2D8 614 aa13.4□□□□□ -0.26
ZNF548-210ENST00000600442 PCDHB12Q9Y5F1 795 aa13.4□□□□□ -0.26
ZNF548-210ENST00000600442 TANC1Q9C0D5 1861 aa13.4□□□□□ -0.26
ZNF548-210ENST00000600442 UQCRHLA0A096LP55 91 aa13.39□□□□□ -0.27
ZNF548-210ENST00000600442 FAM170AA1A519 330 aa13.39□□□□□ -0.27
ZNF548-210ENST00000600442 MYBPHLA2RUH7 354 aa13.39□□□□□ -0.27
ZNF548-210ENST00000600442 EPOPA6NHQ4 379 aa13.39□□□□□ -0.27
ZNF548-210ENST00000600442 TLL1O43897 1013 aa13.39□□□□□ -0.27
ZNF548-210ENST00000600442 HSF2BPO75031 334 aa13.39□□□□□ -0.27
ZNF548-210ENST00000600442 UQCRHP07919 91 aa13.39□□□□□ -0.27
ZNF548-210ENST00000600442 LCP1P13796 627 aa13.39□□□□□ -0.27
ZNF548-210ENST00000600442 GPD1P21695 349 aa13.39□□□□□ -0.27
ZNF548-210ENST00000600442 FGFR3P22607 806 aa13.39□□□□□ -0.27
ZNF548-210ENST00000600442 SDC4P31431 198 aa13.39□□□□□ -0.27
ZNF548-210ENST00000600442 CTNNA1P35221 906 aaKnown RBP13.39□□□□□ -0.27
ZNF548-210ENST00000600442 RGS7P49802 495 aa13.39□□□□□ -0.27
ZNF548-210ENST00000600442 ZNF143P52747 638 aaPredicted RBP13.39□□□□□ -0.27
ZNF548-210ENST00000600442 CREMQ03060 361 aa13.39□□□□□ -0.27
ZNF548-210ENST00000600442 KRT17Q04695 432 aa13.39□□□□□ -0.27
ZNF548-210ENST00000600442 C2CD6Q53TS8 623 aa13.39□□□□□ -0.27
ZNF548-210ENST00000600442 VARS2Q5ST30 1063 aaKnown RBP13.39□□□□□ -0.27
ZNF548-210ENST00000600442 VSTM1Q6UX27 236 aa13.39□□□□□ -0.27
ZNF548-210ENST00000600442 PHOSPHO2Q8TCD6 241 aa13.39□□□□□ -0.27
ZNF548-210ENST00000600442 ARNTL2Q8WYA1 636 aa13.39□□□□□ -0.27
ZNF548-210ENST00000600442 MYLPFQ96A32 169 aa13.39□□□□□ -0.27
ZNF548-210ENST00000600442 RBM41Q96IZ5 413 aaKnown RBP13.39□□□□□ -0.27
ZNF548-210ENST00000600442 SLC9A7Q96T83 725 aa13.39□□□□□ -0.27
ZNF548-210ENST00000600442 PSMB7Q99436 277 aa13.39□□□□□ -0.27
ZNF548-210ENST00000600442 LRFN3Q9BTN0 628 aa13.39□□□□□ -0.27
ZNF548-210ENST00000600442 CRTAC1Q9NQ79 661 aa13.39□□□□□ -0.27
ZNF548-210ENST00000600442 CNGB3Q9NQW8 809 aa13.39□□□□□ -0.27
ZNF548-210ENST00000600442 SPG21Q9NZD8 308 aa13.39□□□□□ -0.27
ZNF548-210ENST00000600442 EHD2Q9NZN4 543 aa13.39□□□□□ -0.27
ZNF548-210ENST00000600442 CHORDC1Q9UHD1 332 aaPredicted RBP13.39□□□□□ -0.27
ZNF548-210ENST00000600442 TTC7AQ9ULT0 858 aaPredicted RBP13.39□□□□□ -0.27
ZNF548-210ENST00000600442 USTQ9Y2C2 406 aa13.39□□□□□ -0.27
ZNF548-210ENST00000600442 PCDHB5Q9Y5E4 795 aa13.39□□□□□ -0.27
ZNF548-210ENST00000600442 MUC6Q6W4X9 2439 aa13.39□□□□□ -0.27
ZNF548-210ENST00000600442 TRIM66O15016 1216 aa13.38□□□□□ -0.27
ZNF548-210ENST00000600442 SRGAP2O75044 1071 aa13.38□□□□□ -0.27
ZNF548-210ENST00000600442 ARHGEF15O94989 841 aa13.38□□□□□ -0.27
ZNF548-210ENST00000600442 ZRANB2O95218 330 aaKnown RBP eCLIP13.38□□□□□ -0.27
ZNF548-210ENST00000600442 PDGFRAP16234 1089 aa13.38□□□□□ -0.27
ZNF548-210ENST00000600442 TKTP29401 623 aaKnown RBP13.38□□□□□ -0.27
ZNF548-210ENST00000600442 CXCR5P32302 372 aa13.38□□□□□ -0.27
ZNF548-210ENST00000600442 RFC1P35251 1148 aaPredicted RBP13.38□□□□□ -0.27
ZNF548-210ENST00000600442 GRIK1P39086 918 aa13.38□□□□□ -0.27
ZNF548-210ENST00000600442 RPL34P49207 117 aaKnown RBP13.38□□□□□ -0.27
ZNF548-210ENST00000600442 MAP3K7CLP57077 242 aa13.38□□□□□ -0.27
ZNF548-210ENST00000600442 RNASE9P60153 205 aaKnown RBP13.38□□□□□ -0.27
ZNF548-210ENST00000600442 SMC1AQ14683 1233 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms