RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 ARL14EPQ8N8R7 260 aaPredicted RBP17.7■□□□□ 0.42
SSBP4-204ENST00000597724 PDZD8Q8NEN9 1154 aa17.7■□□□□ 0.42
SSBP4-204ENST00000597724 OVCA2Q8WZ82 227 aa17.7■□□□□ 0.42
SSBP4-204ENST00000597724 KAT5Q92993 513 aa17.7■□□□□ 0.42
SSBP4-204ENST00000597724 FBXO32Q969P5 355 aa17.7■□□□□ 0.42
SSBP4-204ENST00000597724 DDX23Q9BUQ8 820 aaKnown RBP17.7■□□□□ 0.42
SSBP4-204ENST00000597724 DUSP16Q9BY84 665 aa17.7■□□□□ 0.42
SSBP4-204ENST00000597724 INTS2Q9H0H0 1204 aaKnown RBP17.7■□□□□ 0.42
SSBP4-204ENST00000597724 TBC1D17Q9HA65 648 aa17.7■□□□□ 0.42
SSBP4-204ENST00000597724 KIF9Q9HAQ2 790 aa17.7■□□□□ 0.42
SSBP4-204ENST00000597724 PNPLA8Q9NP80 782 aa17.7■□□□□ 0.42
SSBP4-204ENST00000597724 HEBP1Q9NRV9 189 aa17.7■□□□□ 0.42
SSBP4-204ENST00000597724 HCN4Q9Y3Q4 1203 aa17.7■□□□□ 0.42
SSBP4-204ENST00000597724 KMT2EQ8IZD2 1858 aa17.69■□□□□ 0.42
SSBP4-204ENST00000597724 STK25O00506 426 aa17.69■□□□□ 0.42
SSBP4-204ENST00000597724 CKMP06732 381 aa17.69■□□□□ 0.42
SSBP4-204ENST00000597724 PFKLP17858 780 aa17.69■□□□□ 0.42
SSBP4-204ENST00000597724 AOC1P19801 751 aa17.69■□□□□ 0.42
SSBP4-204ENST00000597724 ARHGAP29Q52LW3 1261 aa17.69■□□□□ 0.42
SSBP4-204ENST00000597724 SNX30Q5VWJ9 437 aa17.69■□□□□ 0.42
SSBP4-204ENST00000597724 SASS6Q6UVJ0 657 aa17.69■□□□□ 0.42
SSBP4-204ENST00000597724 RRAGAQ7L523 313 aa17.69■□□□□ 0.42
SSBP4-204ENST00000597724 TMEM105Q8N8V8 129 aa17.69■□□□□ 0.42
SSBP4-204ENST00000597724 FBXO44Q9H4M3 255 aa17.69■□□□□ 0.42
SSBP4-204ENST00000597724 SAMSN1Q9NSI8 373 aaKnown RBP17.69■□□□□ 0.42
SSBP4-204ENST00000597724 THG1LQ9NWX6 298 aaKnown RBP17.69■□□□□ 0.42
SSBP4-204ENST00000597724 TMEM63CQ9P1W3 806 aa17.69■□□□□ 0.42
SSBP4-204ENST00000597724 CHORDC1Q9UHD1 332 aaPredicted RBP17.69■□□□□ 0.42
SSBP4-204ENST00000597724 KIAA1257Q9ULG3 409 aa17.69■□□□□ 0.42
SSBP4-204ENST00000597724 COL4A2P08572 1712 aa17.68■□□□□ 0.42
SSBP4-204ENST00000597724 ZDHHC11BP0C7U3 371 aa17.68■□□□□ 0.42
SSBP4-204ENST00000597724 VDRP11473 427 aa17.68■□□□□ 0.42
SSBP4-204ENST00000597724 PDE6CP51160 858 aa17.68■□□□□ 0.42
SSBP4-204ENST00000597724 MAN2A1Q16706 1144 aa17.68■□□□□ 0.42
SSBP4-204ENST00000597724 SGO2Q562F6 1265 aa17.68■□□□□ 0.42
SSBP4-204ENST00000597724 HSP90AA4PQ58FG1 418 aa17.68■□□□□ 0.42
SSBP4-204ENST00000597724 TMEM270Q6UE05 265 aa17.68■□□□□ 0.42
SSBP4-204ENST00000597724 GBP6Q6ZN66 633 aa17.68■□□□□ 0.42
SSBP4-204ENST00000597724 GPRIN1Q7Z2K8 1008 aa17.68■□□□□ 0.42
SSBP4-204ENST00000597724 RIN3Q8TB24 985 aa17.68■□□□□ 0.42
SSBP4-204ENST00000597724 ENOX1Q8TC92 643 aaKnown RBP17.68■□□□□ 0.42
SSBP4-204ENST00000597724 ZFYVE19Q96K21 471 aa17.68■□□□□ 0.42
SSBP4-204ENST00000597724 KREMEN1Q96MU8 473 aa17.68■□□□□ 0.42
SSBP4-204ENST00000597724 CRACR2AQ9BSW2 395 aa17.68■□□□□ 0.42
SSBP4-204ENST00000597724 RNF38Q9H0F5 515 aa17.68■□□□□ 0.42
SSBP4-204ENST00000597724 KCNH6Q9H252 994 aa17.68■□□□□ 0.42
SSBP4-204ENST00000597724 ANO10Q9NW15 660 aa17.68■□□□□ 0.42
SSBP4-204ENST00000597724 PCDHB4Q9Y5E5 795 aa17.68■□□□□ 0.42
SSBP4-204ENST00000597724 TICRRQ7Z2Z1 1910 aa17.68■□□□□ 0.42
SSBP4-204ENST00000597724 PATJQ8NI35 1801 aa17.68■□□□□ 0.42
SSBP4-204ENST00000597724 COL4A3Q01955 1670 aa17.67■□□□□ 0.42
SSBP4-204ENST00000597724 MUC6Q6W4X9 2439 aa17.67■□□□□ 0.42
SSBP4-204ENST00000597724 KANSL1LA0AUZ9 987 aa17.67■□□□□ 0.42
SSBP4-204ENST00000597724 GTPBP10A4D1E9 387 aaKnown RBP17.67■□□□□ 0.42
SSBP4-204ENST00000597724 SHISA7A6NL88 538 aa17.67■□□□□ 0.42
SSBP4-204ENST00000597724 RNF225M0QZC1 329 aaPredicted RBP17.67■□□□□ 0.42
SSBP4-204ENST00000597724 OLFM2O95897 454 aa17.67■□□□□ 0.42
SSBP4-204ENST00000597724 ABL1P00519 1130 aa17.67■□□□□ 0.42
SSBP4-204ENST00000597724 OAS1P00973 400 aaKnown RBP17.67■□□□□ 0.42
SSBP4-204ENST00000597724 PAEPP09466 180 aa17.67■□□□□ 0.42
SSBP4-204ENST00000597724 SLC9A1P19634 815 aa17.67■□□□□ 0.42
SSBP4-204ENST00000597724 RFX1P22670 979 aa17.67■□□□□ 0.42
SSBP4-204ENST00000597724 MLLT6P55198 1093 aaPredicted RBP17.67■□□□□ 0.42
SSBP4-204ENST00000597724 PLCB2Q00722 1185 aa17.67■□□□□ 0.42
SSBP4-204ENST00000597724 EXOC3L4Q17RC7 722 aa17.67■□□□□ 0.42
SSBP4-204ENST00000597724 TRIM65Q6PJ69 517 aa17.67■□□□□ 0.42
SSBP4-204ENST00000597724 TPRG1Q6ZUI0 275 aa17.67■□□□□ 0.42
SSBP4-204ENST00000597724 C11orf57Q6ZUT1 292 aaPredicted RBP17.67■□□□□ 0.42
SSBP4-204ENST00000597724 ANKRD52Q8NB46 1076 aa17.67■□□□□ 0.42
SSBP4-204ENST00000597724 CSGALNACT1Q8TDX6 532 aa17.67■□□□□ 0.42
SSBP4-204ENST00000597724 JAKMIP2Q96AA8 810 aa17.67■□□□□ 0.42
SSBP4-204ENST00000597724 TUBGCP2Q9BSJ2 902 aa17.67■□□□□ 0.42
SSBP4-204ENST00000597724 UBXN6Q9BZV1 441 aa17.67■□□□□ 0.42
SSBP4-204ENST00000597724 NDST4Q9H3R1 872 aa17.67■□□□□ 0.42
SSBP4-204ENST00000597724 GKN1Q9NS71 199 aa17.67■□□□□ 0.42
SSBP4-204ENST00000597724 ARHGAP26Q9UNA1 814 aa17.67■□□□□ 0.42
SSBP4-204ENST00000597724 NFE2L3Q9Y4A8 694 aa17.67■□□□□ 0.42
SSBP4-204ENST00000597724 ARIH1Q9Y4X5 557 aaPredicted RBP17.67■□□□□ 0.42
SSBP4-204ENST00000597724 KIF26AQ9ULI4 1882 aaPredicted RBP17.67■□□□□ 0.42
SSBP4-204ENST00000597724 F5P12259 2224 aa17.66■□□□□ 0.42
SSBP4-204ENST00000597724 GLULP15104 373 aa17.66■□□□□ 0.42
SSBP4-204ENST00000597724 CD19P15391 556 aa17.66■□□□□ 0.42
SSBP4-204ENST00000597724 TCF3P15923 654 aa17.66■□□□□ 0.42
SSBP4-204ENST00000597724 CD72P21854 359 aa17.66■□□□□ 0.42
SSBP4-204ENST00000597724 KIF11P52732 1056 aa17.66■□□□□ 0.42
SSBP4-204ENST00000597724 SLC7A9P82251 487 aa17.66■□□□□ 0.42
SSBP4-204ENST00000597724 ZXDBP98169 803 aa17.66■□□□□ 0.42
SSBP4-204ENST00000597724 ZNF77Q15935 545 aa17.66■□□□□ 0.42
SSBP4-204ENST00000597724 STX1AQ16623 288 aa17.66■□□□□ 0.42
SSBP4-204ENST00000597724 VWA3BQ502W6 1294 aa17.66■□□□□ 0.42
SSBP4-204ENST00000597724 MIIPQ5JXC2 388 aa17.66■□□□□ 0.42
SSBP4-204ENST00000597724 TTC30AQ86WT1 665 aa17.66■□□□□ 0.42
SSBP4-204ENST00000597724 PJA1Q8NG27 643 aa17.66■□□□□ 0.42
SSBP4-204ENST00000597724 SH3RF2Q8TEC5 729 aa17.66■□□□□ 0.42
SSBP4-204ENST00000597724 TFAP2BQ92481 460 aa17.66■□□□□ 0.42
SSBP4-204ENST00000597724 FAM83CQ9BQN1 747 aa17.66■□□□□ 0.42
SSBP4-204ENST00000597724 FOXQ1Q9C009 403 aa17.66■□□□□ 0.42
SSBP4-204ENST00000597724 UBE2TQ9NPD8 197 aaPredicted RBP17.66■□□□□ 0.42
SSBP4-204ENST00000597724 GMIPQ9P107 970 aa17.66■□□□□ 0.42
SSBP4-204ENST00000597724 TSPAN16Q9UKR8 245 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms