RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 GABBR2O75899 941 aa12.72□□□□□ -0.37
APOC1-206ENST00000590334 RTN3O95197 1032 aaPredicted RBP12.72□□□□□ -0.37
APOC1-206ENST00000590334 PLEKP08567 350 aaPredicted RBP12.72□□□□□ -0.37
APOC1-206ENST00000590334 TNFAIP3P21580 790 aa12.72□□□□□ -0.37
APOC1-206ENST00000590334 KIF11P52732 1056 aa12.72□□□□□ -0.37
APOC1-206ENST00000590334 SLC5A3P53794 718 aa12.72□□□□□ -0.37
APOC1-206ENST00000590334 EPHA5P54756 1037 aa12.72□□□□□ -0.37
APOC1-206ENST00000590334 GSDMDP57764 484 aa12.72□□□□□ -0.37
APOC1-206ENST00000590334 CENPCQ03188 943 aa12.72□□□□□ -0.37
APOC1-206ENST00000590334 ITIH3Q06033 890 aa12.72□□□□□ -0.37
APOC1-206ENST00000590334 PDCLQ13371 301 aa12.72□□□□□ -0.37
APOC1-206ENST00000590334 CCDC85BQ15834 202 aaPredicted RBP12.72□□□□□ -0.37
APOC1-206ENST00000590334 CLEC16AQ2KHT3 1053 aa12.72□□□□□ -0.37
APOC1-206ENST00000590334 ASTE1Q2TB18 679 aaPredicted RBP12.72□□□□□ -0.37
APOC1-206ENST00000590334 SDHAF4Q5VUM1 108 aa12.72□□□□□ -0.37
APOC1-206ENST00000590334 DENND5BQ6ZUT9 1274 aa12.72□□□□□ -0.37
APOC1-206ENST00000590334 GPRIN1Q7Z2K8 1008 aa12.72□□□□□ -0.37
APOC1-206ENST00000590334 DNAJB7Q7Z6W7 309 aaPredicted RBP12.72□□□□□ -0.37
APOC1-206ENST00000590334 GPR149Q86SP6 731 aa12.72□□□□□ -0.37
APOC1-206ENST00000590334 TMEM110Q86TL2 294 aa12.72□□□□□ -0.37
APOC1-206ENST00000590334 PASD1Q8IV76 773 aa12.72□□□□□ -0.37
APOC1-206ENST00000590334 SCML4Q8N228 414 aa12.72□□□□□ -0.37
APOC1-206ENST00000590334 ELMOD1Q8N336 334 aa12.72□□□□□ -0.37
APOC1-206ENST00000590334 C12orf76Q8N812 135 aaPredicted RBP12.72□□□□□ -0.37
APOC1-206ENST00000590334 GPR152Q8TDT2 470 aa12.72□□□□□ -0.37
APOC1-206ENST00000590334 GIPC2Q8TF65 315 aa12.72□□□□□ -0.37
APOC1-206ENST00000590334 ANP32BQ92688 251 aaKnown RBP12.72□□□□□ -0.37
APOC1-206ENST00000590334 ZNF512Q96ME7 567 aaPredicted RBP12.72□□□□□ -0.37
APOC1-206ENST00000590334 PCDHB18PQ96TA0 734 aa12.72□□□□□ -0.37
APOC1-206ENST00000590334 LRRC3Q9BY71 257 aa12.72□□□□□ -0.37
APOC1-206ENST00000590334 PDCL3Q9H2J4 239 aa12.72□□□□□ -0.37
APOC1-206ENST00000590334 ADAM7Q9H2U9 754 aa12.72□□□□□ -0.37
APOC1-206ENST00000590334 AVENQ9NQS1 362 aaPredicted RBP12.72□□□□□ -0.37
APOC1-206ENST00000590334 NCANO14594 1321 aa12.71□□□□□ -0.37
APOC1-206ENST00000590334 DDX3XO00571 662 aaKnown RBP eCLIP12.71□□□□□ -0.371e-7■■■■■ 93.7
APOC1-206ENST00000590334 CCL16O15467 120 aa12.71□□□□□ -0.37
APOC1-206ENST00000590334 GZMAP12544 262 aa12.71□□□□□ -0.37
APOC1-206ENST00000590334 PTPN2P17706 415 aa12.71□□□□□ -0.37
APOC1-206ENST00000590334 ACADSBP45954 432 aa12.71□□□□□ -0.37
APOC1-206ENST00000590334 GABRB2P47870 512 aa12.71□□□□□ -0.37
APOC1-206ENST00000590334 USP46P62068 366 aa12.71□□□□□ -0.37
APOC1-206ENST00000590334 MTMR3Q13615 1198 aa12.71□□□□□ -0.37
APOC1-206ENST00000590334 TDRD12Q587J7 1177 aaKnown RBP12.71□□□□□ -0.37
APOC1-206ENST00000590334 RARS2Q5T160 578 aaKnown RBP12.71□□□□□ -0.37
APOC1-206ENST00000590334 PM20D1Q6GTS8 502 aa12.71□□□□□ -0.37
APOC1-206ENST00000590334 PPP1R2P3Q6NXS1 205 aa12.71□□□□□ -0.37
APOC1-206ENST00000590334 TMC5Q6UXY8 1006 aa12.71□□□□□ -0.37
APOC1-206ENST00000590334 VPS36Q86VN1 386 aa12.71□□□□□ -0.37
APOC1-206ENST00000590334 TMC8Q8IU68 726 aa12.71□□□□□ -0.37
APOC1-206ENST00000590334 LEMD2Q8NC56 503 aa12.71□□□□□ -0.37
APOC1-206ENST00000590334 SMRP1Q8NCR6 262 aa12.71□□□□□ -0.37
APOC1-206ENST00000590334 C1orf131Q8NDD1 294 aaKnown RBP12.71□□□□□ -0.37
APOC1-206ENST00000590334 SCAMP5Q8TAC9 235 aa12.71□□□□□ -0.37
APOC1-206ENST00000590334 SMG7Q92540 1137 aaKnown RBP12.71□□□□□ -0.37
APOC1-206ENST00000590334 NOX5Q96PH1 765 aa12.71□□□□□ -0.37
APOC1-206ENST00000590334 CHP1Q99653 195 aa12.71□□□□□ -0.37
APOC1-206ENST00000590334 FBXO44Q9H4M3 255 aa12.71□□□□□ -0.37
APOC1-206ENST00000590334 UBE2ZQ9H832 354 aaPredicted RBP12.71□□□□□ -0.37
APOC1-206ENST00000590334 DNMT3BQ9UBC3 853 aaKnown RBP12.71□□□□□ -0.37
APOC1-206ENST00000590334 NENFQ9UMX5 172 aa12.71□□□□□ -0.37
APOC1-206ENST00000590334 SCML2Q9UQR0 700 aa12.71□□□□□ -0.37
APOC1-206ENST00000590334 A0A087X0T9 212 aa12.7□□□□□ -0.38
APOC1-206ENST00000590334 SPDYE4A6NLX3 237 aa12.7□□□□□ -0.38
APOC1-206ENST00000590334 FGF19O95750 216 aa12.7□□□□□ -0.38
APOC1-206ENST00000590334 FAM228BP0C875 321 aa12.7□□□□□ -0.38
APOC1-206ENST00000590334 MMP8P22894 467 aa12.7□□□□□ -0.38
APOC1-206ENST00000590334 YWHAQP27348 245 aa12.7□□□□□ -0.38
APOC1-206ENST00000590334 EIF4A3P38919 411 aaKnown RBP12.7□□□□□ -0.38
APOC1-206ENST00000590334 TKTL1P51854 596 aa12.7□□□□□ -0.38
APOC1-206ENST00000590334 SNX16P57768 344 aa12.7□□□□□ -0.38
APOC1-206ENST00000590334 PTPN20Q4JDL3 420 aa12.7□□□□□ -0.38
APOC1-206ENST00000590334 NAA35Q5VZE5 725 aa12.7□□□□□ -0.38
APOC1-206ENST00000590334 ACAD10Q6JQN1 1059 aa12.7□□□□□ -0.38
APOC1-206ENST00000590334 CCDC186Q7Z3E2 898 aa12.7□□□□□ -0.38
APOC1-206ENST00000590334 PHF13Q86YI8 300 aaPredicted RBP12.7□□□□□ -0.38
APOC1-206ENST00000590334 TMEM139Q8IV31 216 aa12.7□□□□□ -0.38
APOC1-206ENST00000590334 STKLD1Q8NE28 680 aa12.7□□□□□ -0.38
APOC1-206ENST00000590334 FEZF2Q8TBJ5 459 aa12.7□□□□□ -0.38
APOC1-206ENST00000590334 CPA5Q8WXQ8 436 aa12.7□□□□□ -0.38
APOC1-206ENST00000590334 OVCA2Q8WZ82 227 aa12.7□□□□□ -0.38
APOC1-206ENST00000590334 PPP1R13BQ96KQ4 1090 aa12.7□□□□□ -0.38
APOC1-206ENST00000590334 CPXM1Q96SM3 734 aa12.7□□□□□ -0.38
APOC1-206ENST00000590334 ISCUQ9H1K1 167 aa12.7□□□□□ -0.38
APOC1-206ENST00000590334 NHEJ1Q9H9Q4 299 aaPredicted RBP12.7□□□□□ -0.38
APOC1-206ENST00000590334 IL21Q9HBE4 155 aa12.7□□□□□ -0.38
APOC1-206ENST00000590334 LRRC4Q9HBW1 653 aa12.7□□□□□ -0.38
APOC1-206ENST00000590334 ZNF334Q9HCZ1 680 aaPredicted RBP12.7□□□□□ -0.38
APOC1-206ENST00000590334 CNGB3Q9NQW8 809 aa12.7□□□□□ -0.38
APOC1-206ENST00000590334 HCFC1R1Q9NWW0 138 aa12.7□□□□□ -0.38
APOC1-206ENST00000590334 UXTQ9UBK9 157 aaPredicted RBP12.7□□□□□ -0.38
APOC1-206ENST00000590334 ADAMTS1Q9UHI8 967 aa12.7□□□□□ -0.38
APOC1-206ENST00000590334 COG5Q9UP83 839 aa12.7□□□□□ -0.38
APOC1-206ENST00000590334 SPTBN5Q9NRC6 3674 aaKnown RBP12.7□□□□□ -0.38
APOC1-206ENST00000590334 E5RJQ4 531 aa12.69□□□□□ -0.38
APOC1-206ENST00000590334 RTN2O75298 545 aa12.69□□□□□ -0.38
APOC1-206ENST00000590334 FBXO21O94952 628 aa12.69□□□□□ -0.38
APOC1-206ENST00000590334 ZBED1O96006 694 aa12.69□□□□□ -0.38
APOC1-206ENST00000590334 F11P03951 625 aa12.69□□□□□ -0.38
APOC1-206ENST00000590334 RHOP08100 348 aa12.69□□□□□ -0.38
APOC1-206ENST00000590334 PPP3CCP48454 512 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms