RNA–Protein interactions for RNA: ENST00000589916.5

BCAS3-223, Transcript of BCAS3, microtubule associated cell migration factor, human

TSL 2

Gene BCAS3, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BCAS3-223	ENST00000589916	VAMP7	P51809	220 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	ZNF75D	P51815	510 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	AFF1	P51825	1210 aa	Known RBP	5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	EPHA5	P54756	1037 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	FAM193A	P78312	1265 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	SERINC3	Q13530	473 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	SLC5A9	Q2M3M2	681 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	KRTAP21-3	Q3LHN1	58 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	TXNDC11	Q6PKC3	985 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	NT5DC4	Q86YG4	428 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	BRSK2	Q8IWQ3	736 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	RDH13	Q8NBN7	331 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	ZNF397	Q8NF99	534 aa	Predicted RBP	5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	LNX1	Q8TBB1	728 aa	Predicted RBP	5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	LPP	Q93052	612 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	CCDC127	Q96BQ5	260 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	SAAL1	Q96ER3	474 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	ANKRD36BP1	Q96IX9	119 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	CPB2	Q96IY4	423 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	FAM193B	Q96PV7	902 aa	Predicted RBP	5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	NUP58	Q9BVL2	599 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	COLEC11	Q9BWP8	271 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	XPO4	Q9C0E2	1151 aa	Known RBP	5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	GPR88	Q9GZN0	384 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	DNAI2	Q9GZS0	605 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	CDT1	Q9H211	546 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	VPS16	Q9H269	839 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	NDST4	Q9H3R1	872 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	PDZD7	Q9H5P4	517 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	ASB7	Q9H672	318 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	MINDY3	Q9H8M7	445 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	RSAD1	Q9HA92	442 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	PLEKHA5	Q9HAU0	1116 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	POLM	Q9NP87	494 aa	Predicted RBP	5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	RBM12	Q9NTZ6	932 aa	Known RBP	5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	DNAAF2	Q9NVR5	837 aa	Known RBP	5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	OBP2A	Q9NY56	170 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	ANKMY1	Q9P2S6	941 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	PAXBP1	Q9Y5B6	917 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916	PCDHB2	Q9Y5E7	798 aa		5.91	□□□□□ -1.46
BCAS3-223	ENST00000589916		A0A1W2PQC6	194 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	WDR27	A2RRH5	827 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	GTPBP10	A4D1E9	387 aa	Known RBP	5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	GOLGA8IP	A6NC78	632 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	GOLGA8J	A6NMD2	632 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	TTLL13P	A6NNM8	815 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	SPECC1L-ADORA2A	F8WAN1	911 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	NRG2	O14511	850 aa	Predicted RBP	5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	B4GALT5	O43286	388 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	PHACTR2	O75167	634 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	CSDE1	O75534	798 aa	Known RBP	5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	GJB3	O75712	270 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	DLAT	P10515	647 aa	Known RBP	5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	ITGA4	P13612	1032 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	ATP1A3	P13637	1013 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	CD59	P13987	128 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	PTPN2	P17706	415 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	TRIM21	P19474	475 aa	Known RBP	5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	MXI1	P50539	228 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	GSDMD	P57764	484 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	MYL7	Q01449	175 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	CYP24A1	Q07973	514 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	KCNH2	Q12809	1159 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	BIRC3	Q13489	604 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	TRPC3	Q13507	836 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	PSMD6	Q15008	389 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	AMHR2	Q16671	573 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	EXOC3L4	Q17RC7	722 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	DUOXA2	Q1HG44	320 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	C4orf17	Q53FE4	359 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	TMEM196	Q5HYL7	178 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	SPECC1L	Q69YQ0	1117 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	KRT39	Q6A163	491 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	FUT10	Q6P4F1	479 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	SLC39A4	Q6P5W5	647 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	GBP6	Q6ZN66	633 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	TOGARAM2	Q6ZUX3	1019 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	SYT13	Q7L8C5	426 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	TMC8	Q8IU68	726 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	CBWD2	Q8IUF1	395 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	WDR49	Q8IV35	697 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	TRIM59	Q8IWR1	403 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	LEMD2	Q8NC56	503 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	GSTCD	Q8NEC7	633 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	BEST2	Q8NFU1	509 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	NEK11	Q8NG66	645 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	MCRS1	Q96EZ8	462 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	EEF2KMT	Q96G04	330 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	TMEM8A	Q9HCN3	771 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	PTPRH	Q9HD43	1115 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	SLC38A7	Q9NVC3	462 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	IMPACT	Q9P2X3	320 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	NXF1	Q9UBU9	619 aa	Known RBP	5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	PARP2	Q9UGN5	583 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	CPSF3	Q9UKF6	684 aa	Known RBP	5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	ADAM28	Q9UKQ2	775 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	DERA	Q9Y315	318 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	C2CD2	Q9Y426	696 aa		5.9	□□□□□ -1.46
BCAS3-223	ENST00000589916	CREBBP	Q92793	2442 aa		5.9	□□□□□ -1.47
BCAS3-223	ENST00000589916	ATG2B	Q96BY7	2078 aa		5.9	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms