RNA–Protein interactions for RNA: ENST00000589253.1

TOMM40-204, Transcript of translocase of outer mitochondrial membrane 40, humanhuman

TSL 3

Gene TOMM40, Length 207 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40-204ENST00000589253 ARRDC1-AS1Q9H2J1 176 aa12.42□□□□□ -0.42
TOMM40-204ENST00000589253 RBM12Q9NTZ6 932 aaKnown RBP12.42□□□□□ -0.42
TOMM40-204ENST00000589253 NXF1Q9UBU9 619 aaKnown RBP12.42□□□□□ -0.42
TOMM40-204ENST00000589253 MAP1BP46821 2468 aaKnown RBP12.42□□□□□ -0.42
TOMM40-204ENST00000589253 CFAP47Q6ZTR5 3102 aa12.41□□□□□ -0.42
TOMM40-204ENST00000589253 A0A1W2PRU2 124 aa12.41□□□□□ -0.42
TOMM40-204ENST00000589253 K7ESF4 209 aa12.41□□□□□ -0.42
TOMM40-204ENST00000589253 P4HA2O15460 535 aa12.41□□□□□ -0.42
TOMM40-204ENST00000589253 FGF19O95750 216 aa12.41□□□□□ -0.42
TOMM40-204ENST00000589253 PRKCSHP14314 528 aaPredicted RBP12.41□□□□□ -0.42
TOMM40-204ENST00000589253 WARSP23381 471 aaKnown RBP12.41□□□□□ -0.42
TOMM40-204ENST00000589253 PMLP29590 882 aa12.41□□□□□ -0.42
TOMM40-204ENST00000589253 CTHP32929 405 aa12.41□□□□□ -0.42
TOMM40-204ENST00000589253 ALDH1A3P47895 512 aa12.41□□□□□ -0.42
TOMM40-204ENST00000589253 EPHA5P54756 1037 aa12.41□□□□□ -0.42
TOMM40-204ENST00000589253 CDH8P55286 799 aa12.41□□□□□ -0.42
TOMM40-204ENST00000589253 SHC2P98077 582 aa12.41□□□□□ -0.42
TOMM40-204ENST00000589253 APBA1Q02410 837 aa12.41□□□□□ -0.42
TOMM40-204ENST00000589253 GAS6Q14393 721 aa12.41□□□□□ -0.42
TOMM40-204ENST00000589253 SGSM1Q2NKQ1 1148 aa12.41□□□□□ -0.42
TOMM40-204ENST00000589253 VWA3BQ502W6 1294 aa12.41□□□□□ -0.42
TOMM40-204ENST00000589253 ARHGAP29Q52LW3 1261 aa12.41□□□□□ -0.42
TOMM40-204ENST00000589253 ARHGAP15Q53QZ3 475 aa12.41□□□□□ -0.42
TOMM40-204ENST00000589253 ZNF667Q5HYK9 610 aa12.41□□□□□ -0.42
TOMM40-204ENST00000589253 N4BP2L1Q5TBK1 243 aaPredicted RBP12.41□□□□□ -0.42
TOMM40-204ENST00000589253 RALGAPA1Q6GYQ0 2036 aa12.41□□□□□ -0.42
TOMM40-204ENST00000589253 Q6ZS52 159 aa12.41□□□□□ -0.42
TOMM40-204ENST00000589253 CACNA2D4Q7Z3S7 1137 aa12.41□□□□□ -0.42
TOMM40-204ENST00000589253 PKMYT1Q99640 499 aa12.41□□□□□ -0.42
TOMM40-204ENST00000589253 ARID3AQ99856 593 aa12.41□□□□□ -0.42
TOMM40-204ENST00000589253 CRACR2AQ9BSW2 395 aa12.41□□□□□ -0.42
TOMM40-204ENST00000589253 OXCT2Q9BYC2 517 aaPredicted RBP12.41□□□□□ -0.42
TOMM40-204ENST00000589253 NAT10Q9H0A0 1025 aaKnown RBP12.41□□□□□ -0.42
TOMM40-204ENST00000589253 NDST4Q9H3R1 872 aa12.41□□□□□ -0.42
TOMM40-204ENST00000589253 TSPY26PQ9H489 355 aa12.41□□□□□ -0.42
TOMM40-204ENST00000589253 CEP72Q9P209 647 aa12.41□□□□□ -0.42
TOMM40-204ENST00000589253 MAGEC2Q9UBF1 373 aaPredicted RBP12.41□□□□□ -0.42
TOMM40-204ENST00000589253 HMGXB4Q9UGU5 601 aa12.41□□□□□ -0.42
TOMM40-204ENST00000589253 LIMA1Q9UHB6 759 aaKnown RBP12.41□□□□□ -0.42
TOMM40-204ENST00000589253 YIPF1Q9Y548 306 aa12.41□□□□□ -0.42
TOMM40-204ENST00000589253 MYBPHLA2RUH7 354 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 ARNTLO00327 626 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 HUS1O60921 280 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 ATG13O75143 517 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 TACC1O75410 805 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 MOSPD3O75425 235 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 RPP40O75818 363 aaKnown RBP12.4□□□□□ -0.42
TOMM40-204ENST00000589253 ZNF806P0C7X5 589 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 ACAT1P24752 427 aaKnown RBP12.4□□□□□ -0.42
TOMM40-204ENST00000589253 LMO2P25791 158 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 HOXA6P31267 233 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 SOX9P48436 509 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 CDR1P51861 262 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 COPB1P53618 953 aaKnown RBP12.4□□□□□ -0.42
TOMM40-204ENST00000589253 TNNC1P63316 161 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 PLCB2Q00722 1185 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 FCHO2Q0JRZ9 810 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 KCNMA1Q12791 1236 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 PON2Q15165 354 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 SF3A2Q15428 464 aaKnown RBP12.4□□□□□ -0.42
TOMM40-204ENST00000589253 STPG1Q5TH74 334 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 RNF19BQ6ZMZ0 732 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 DPH6Q7L8W6 267 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 LRRTM3Q86VH5 581 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 ARHGEF19Q8IW93 802 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 TMEM86AQ8N2M4 240 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 UBR7Q8N806 425 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 TTC8Q8TAM2 541 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 SHKBP1Q8TBC3 707 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 SPATA18Q8TC71 538 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 GAB3Q8WWW8 586 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 TAF4BQ92750 862 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 KAT5Q92993 513 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 MMS19Q96T76 1030 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 NIF3L1Q9GZT8 377 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 INTS2Q9H0H0 1204 aaKnown RBP12.4□□□□□ -0.42
TOMM40-204ENST00000589253 ZCWPW1Q9H0M4 648 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 CRISPLD1Q9H336 500 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 DPEP3Q9H4B8 488 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 SIX2Q9NPC8 291 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 TMLHEQ9NVH6 421 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 DDX43Q9NXZ2 648 aaKnown RBP12.4□□□□□ -0.42
TOMM40-204ENST00000589253 GCNT4Q9P109 453 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 AJAP1Q9UKB5 411 aaPredicted RBP12.4□□□□□ -0.42
TOMM40-204ENST00000589253 DSEQ9UL01 958 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 SLC8A2Q9UPR5 921 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 R3HCC1Q9Y3T6 440 aaKnown RBP12.4□□□□□ -0.42
TOMM40-204ENST00000589253 CHD8Q9HCK8 2581 aa12.4□□□□□ -0.42
TOMM40-204ENST00000589253 GTPBP10A4D1E9 387 aaKnown RBP12.39□□□□□ -0.43
TOMM40-204ENST00000589253 SMTNL1A8MU46 457 aa12.39□□□□□ -0.43
TOMM40-204ENST00000589253 NRG2O14511 850 aaPredicted RBP12.39□□□□□ -0.43
TOMM40-204ENST00000589253 EPN2O95208 641 aa12.39□□□□□ -0.43
TOMM40-204ENST00000589253 INCA1Q0VD86 236 aa12.39□□□□□ -0.43
TOMM40-204ENST00000589253 LRMPQ12912 555 aa12.39□□□□□ -0.43
TOMM40-204ENST00000589253 CCDC6Q16204 474 aa12.39□□□□□ -0.43
TOMM40-204ENST00000589253 ITIH5Q86UX2 942 aa12.39□□□□□ -0.43
TOMM40-204ENST00000589253 ARID3BQ8IVW6 561 aaPredicted RBP12.39□□□□□ -0.43
TOMM40-204ENST00000589253 TTC9BQ8N6N2 239 aa12.39□□□□□ -0.43
TOMM40-204ENST00000589253 EHBP1Q8NDI1 1231 aa12.39□□□□□ -0.43
TOMM40-204ENST00000589253 WHAMMQ8TF30 809 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms