RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 DPYDQ12882 1025 aa22.24■■□□□ 1.15
CCDC42-203ENST00000581598 SGSM1Q2NKQ1 1148 aa22.24■■□□□ 1.15
CCDC42-203ENST00000581598 FBXO43Q4G163 708 aa22.24■■□□□ 1.15
CCDC42-203ENST00000581598 OVCA2Q8WZ82 227 aa22.24■■□□□ 1.15
CCDC42-203ENST00000581598 RMDN1Q96DB5 314 aa22.24■■□□□ 1.15
CCDC42-203ENST00000581598 SLITRK1Q96PX8 696 aa22.24■■□□□ 1.15
CCDC42-203ENST00000581598 FRMD4BQ9Y2L6 1034 aa22.24■■□□□ 1.15
CCDC42-203ENST00000581598 WNT6Q9Y6F9 365 aa22.24■■□□□ 1.15
CCDC42-203ENST00000581598 CACNA1AO00555 2505 aa22.24■■□□□ 1.15
CCDC42-203ENST00000581598 ATG2BQ96BY7 2078 aa22.23■■□□□ 1.15
CCDC42-203ENST00000581598 KIAA1549LQ6ZVL6 1849 aa22.23■■□□□ 1.15
CCDC42-203ENST00000581598 CCDC163A0A0D9SF12 145 aa22.23■■□□□ 1.15
CCDC42-203ENST00000581598 CLDN5O00501 218 aa22.23■■□□□ 1.15
CCDC42-203ENST00000581598 HRO43593 1189 aa22.23■■□□□ 1.15
CCDC42-203ENST00000581598 RTN3O95197 1032 aaPredicted RBP22.23■■□□□ 1.15
CCDC42-203ENST00000581598 OAS1P00973 400 aaKnown RBP22.23■■□□□ 1.15
CCDC42-203ENST00000581598 GALK1P51570 392 aa22.23■■□□□ 1.15
CCDC42-203ENST00000581598 CDH8P55286 799 aa22.23■■□□□ 1.15
CCDC42-203ENST00000581598 NR1H3Q13133 447 aa22.23■■□□□ 1.15
CCDC42-203ENST00000581598 KRBA2Q6ZNG9 492 aa22.23■■□□□ 1.15
CCDC42-203ENST00000581598 SV2AQ7L0J3 742 aa22.23■■□□□ 1.15
CCDC42-203ENST00000581598 WDR5BQ86VZ2 330 aa22.23■■□□□ 1.15
CCDC42-203ENST00000581598 NUP93Q8N1F7 819 aa22.23■■□□□ 1.15
CCDC42-203ENST00000581598 P2RY13Q9BPV8 354 aa22.23■■□□□ 1.15
CCDC42-203ENST00000581598 DLL3Q9NYJ7 618 aa22.23■■□□□ 1.15
CCDC42-203ENST00000581598 MYO16Q9Y6X6 1858 aa22.22■■□□□ 1.15
CCDC42-203ENST00000581598 ASS1P00966 412 aaKnown RBP22.22■■□□□ 1.15
CCDC42-203ENST00000581598 EGFP01133 1207 aa22.22■■□□□ 1.15
CCDC42-203ENST00000581598 PRR29P0C7W0 189 aa22.22■■□□□ 1.15
CCDC42-203ENST00000581598 TGM1P22735 817 aa22.22■■□□□ 1.15
CCDC42-203ENST00000581598 ZXDBP98169 803 aa22.22■■□□□ 1.15
CCDC42-203ENST00000581598 TAF10Q12962 218 aa22.22■■□□□ 1.15
CCDC42-203ENST00000581598 C1orf220Q5T0J3 134 aa22.22■■□□□ 1.15
CCDC42-203ENST00000581598 CEP135Q66GS9 1140 aa22.22■■□□□ 1.15
CCDC42-203ENST00000581598 PAQR9Q6ZVX9 377 aa22.22■■□□□ 1.15
CCDC42-203ENST00000581598 FAM35AQ86V20 835 aa22.22■■□□□ 1.15
CCDC42-203ENST00000581598 UNC93AQ86WB7 457 aa22.22■■□□□ 1.15
CCDC42-203ENST00000581598 GUF1Q8N442 669 aaKnown RBP22.22■■□□□ 1.15
CCDC42-203ENST00000581598 PDZD8Q8NEN9 1154 aa22.22■■□□□ 1.15
CCDC42-203ENST00000581598 CD101Q93033 1021 aa22.22■■□□□ 1.15
CCDC42-203ENST00000581598 SDCBP2Q9H190 292 aa22.22■■□□□ 1.15
CCDC42-203ENST00000581598 GOLPH3LQ9H4A5 285 aa22.22■■□□□ 1.15
CCDC42-203ENST00000581598 FBRSL1Q9HCM7 1045 aaKnown RBP22.22■■□□□ 1.15
CCDC42-203ENST00000581598 COMMD8Q9NX08 183 aa22.22■■□□□ 1.15
CCDC42-203ENST00000581598 IL37Q9NZH6 218 aa22.22■■□□□ 1.15
CCDC42-203ENST00000581598 LEFTY2O00292 366 aa22.21■■□□□ 1.15
CCDC42-203ENST00000581598 LRP3O75074 770 aa22.21■■□□□ 1.15
CCDC42-203ENST00000581598 NFATC1O95644 943 aa22.21■■□□□ 1.15
CCDC42-203ENST00000581598 RETP07949 1114 aa22.21■■□□□ 1.15
CCDC42-203ENST00000581598 YWHAQP27348 245 aa22.21■■□□□ 1.15
CCDC42-203ENST00000581598 RAP1GAPP47736 663 aa22.21■■□□□ 1.15
CCDC42-203ENST00000581598 MCCD1P59942 119 aaPredicted RBP22.21■■□□□ 1.15
CCDC42-203ENST00000581598 SIM2Q14190 667 aaPredicted RBP22.21■■□□□ 1.15
CCDC42-203ENST00000581598 PUM1Q14671 1186 aaKnown RBP eCLIP22.21■■□□□ 1.15
CCDC42-203ENST00000581598 PKN3Q6P5Z2 889 aa22.21■■□□□ 1.15
CCDC42-203ENST00000581598 CRYBG2Q8N1P7 616 aa22.21■■□□□ 1.15
CCDC42-203ENST00000581598 SMARCD1Q96GM5 515 aa22.21■■□□□ 1.15
CCDC42-203ENST00000581598 RNF38Q9H0F5 515 aa22.21■■□□□ 1.15
CCDC42-203ENST00000581598 TNFRSF10BO14763 440 aa22.2■■□□□ 1.14
CCDC42-203ENST00000581598 RNF40O75150 1001 aa22.2■■□□□ 1.14
CCDC42-203ENST00000581598 SDHBP21912 280 aa22.2■■□□□ 1.14
CCDC42-203ENST00000581598 VAMP7P51809 220 aa22.2■■□□□ 1.14
CCDC42-203ENST00000581598 SNX30Q5VWJ9 437 aa22.2■■□□□ 1.14
CCDC42-203ENST00000581598 SCARA5Q6ZMJ2 495 aa22.2■■□□□ 1.14
CCDC42-203ENST00000581598 INTS8Q75QN2 995 aaKnown RBP22.2■■□□□ 1.14
CCDC42-203ENST00000581598 DDX42Q86XP3 938 aaKnown RBP eCLIP22.2■■□□□ 1.14
CCDC42-203ENST00000581598 ENGASEQ8NFI3 743 aa22.2■■□□□ 1.14
CCDC42-203ENST00000581598 LINC00597Q9H2U6 94 aa22.2■■□□□ 1.14
CCDC42-203ENST00000581598 DMAP1Q9NPF5 467 aaPredicted RBP22.2■■□□□ 1.14
CCDC42-203ENST00000581598 SPAG17Q6Q759 2223 aa22.2■■□□□ 1.14
CCDC42-203ENST00000581598 MYH10P35580 1976 aa22.19■■□□□ 1.14
CCDC42-203ENST00000581598 FAM92AA1XBS5 289 aa22.19■■□□□ 1.14
CCDC42-203ENST00000581598 PRR5-ARHGAP8B1AHC4 643 aa22.19■■□□□ 1.14
CCDC42-203ENST00000581598 SLC9A3R1O14745 358 aaPredicted RBP22.19■■□□□ 1.14
CCDC42-203ENST00000581598 CLSTN1O94985 981 aa22.19■■□□□ 1.14
CCDC42-203ENST00000581598 ZNF202O95125 648 aa22.19■■□□□ 1.14
CCDC42-203ENST00000581598 MBD3O95983 291 aa22.19■■□□□ 1.14
CCDC42-203ENST00000581598 NR2F2P24468 414 aa22.19■■□□□ 1.14
CCDC42-203ENST00000581598 ASPAP45381 313 aa22.19■■□□□ 1.14
CCDC42-203ENST00000581598 ARHGAP8P85298 464 aa22.19■■□□□ 1.14
CCDC42-203ENST00000581598 LMNB2Q03252 620 aa22.19■■□□□ 1.14
CCDC42-203ENST00000581598 NAIF1Q69YI7 327 aaPredicted RBP22.19■■□□□ 1.14
CCDC42-203ENST00000581598 PRR23BQ6ZRT6 265 aa22.19■■□□□ 1.14
CCDC42-203ENST00000581598 FUKQ8N0W3 1084 aa22.19■■□□□ 1.14
CCDC42-203ENST00000581598 CAMKK1Q8N5S9 505 aa22.19■■□□□ 1.14
CCDC42-203ENST00000581598 CCDC26Q8TAB7 109 aa22.19■■□□□ 1.14
CCDC42-203ENST00000581598 GPT2Q8TD30 523 aa22.19■■□□□ 1.14
CCDC42-203ENST00000581598 KCNK16Q96T55 309 aa22.19■■□□□ 1.14
CCDC42-203ENST00000581598 MED10Q9BTT4 135 aa22.19■■□□□ 1.14
CCDC42-203ENST00000581598 CSNK1G1Q9HCP0 422 aa22.19■■□□□ 1.14
CCDC42-203ENST00000581598 SLC8A2Q9UPR5 921 aa22.19■■□□□ 1.14
CCDC42-203ENST00000581598 CPQQ9Y646 472 aa22.19■■□□□ 1.14
CCDC42-203ENST00000581598 RALGAPA1Q6GYQ0 2036 aa22.18■■□□□ 1.14
CCDC42-203ENST00000581598 AKAP3O75969 853 aa22.18■■□□□ 1.14
CCDC42-203ENST00000581598 HLA-DRAP01903 254 aa22.18■■□□□ 1.14
CCDC42-203ENST00000581598 RPL13P26373 211 aaKnown RBP22.18■■□□□ 1.14
CCDC42-203ENST00000581598 PIK3CAP42336 1068 aa22.18■■□□□ 1.14
CCDC42-203ENST00000581598 TUBP50607 506 aa22.18■■□□□ 1.14
CCDC42-203ENST00000581598 ZCWPW2Q504Y3 356 aa22.18■■□□□ 1.14
CCDC42-203ENST00000581598 HEATR6Q6AI08 1181 aaKnown RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms