RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 MRGPRX1Q96LB2 322 aa15.16■□□□□ 0.02
CSNK1D-213ENST00000580446 ESYT1Q9BSJ8 1104 aa15.16■□□□□ 0.02
CSNK1D-213ENST00000580446 MRPL4Q9BYD3 311 aaKnown RBP15.16■□□□□ 0.02
CSNK1D-213ENST00000580446 TTC12Q9H892 705 aaPredicted RBP15.16■□□□□ 0.02
CSNK1D-213ENST00000580446 PCDHA12Q9UN75 941 aa15.16■□□□□ 0.02
CSNK1D-213ENST00000580446 ARHGAP26Q9UNA1 814 aa15.16■□□□□ 0.02
CSNK1D-213ENST00000580446 ZNF638Q14966 1978 aaKnown RBP15.16■□□□□ 0.02
CSNK1D-213ENST00000580446 OBSL1O75147 1896 aa15.15■□□□□ 0.02
CSNK1D-213ENST00000580446 H0Y8X5 98 aa15.15■□□□□ 0.02
CSNK1D-213ENST00000580446 PROZP22891 400 aa15.15■□□□□ 0.02
CSNK1D-213ENST00000580446 CYP2F1P24903 491 aa15.15■□□□□ 0.02
CSNK1D-213ENST00000580446 CD6P30203 668 aa15.15■□□□□ 0.02
CSNK1D-213ENST00000580446 NTSR1P30989 418 aa15.15■□□□□ 0.02
CSNK1D-213ENST00000580446 ACTN2P35609 894 aa15.15■□□□□ 0.02
CSNK1D-213ENST00000580446 SUZ12Q15022 739 aaKnown RBP15.15■□□□□ 0.02
CSNK1D-213ENST00000580446 LY6G5CQ5SRR4 150 aa15.15■□□□□ 0.02
CSNK1D-213ENST00000580446 IL27RAQ6UWB1 636 aa15.15■□□□□ 0.02
CSNK1D-213ENST00000580446 CATSPER3Q86XQ3 398 aa15.15■□□□□ 0.02
CSNK1D-213ENST00000580446 SPPL2BQ8TCT7 592 aa15.15■□□□□ 0.02
CSNK1D-213ENST00000580446 NRSN2Q9GZP1 204 aa15.15■□□□□ 0.02
CSNK1D-213ENST00000580446 RELNP78509 3460 aa15.15■□□□□ 0.02
CSNK1D-213ENST00000580446 PHLPP2Q6ZVD8 1323 aa15.15■□□□□ 0.02
CSNK1D-213ENST00000580446 USP9YO00507 2555 aaPredicted RBP15.14■□□□□ 0.01
CSNK1D-213ENST00000580446 KCNJ18B7U540 433 aa15.14■□□□□ 0.01
CSNK1D-213ENST00000580446 WASH3PC4AMC7 463 aa15.14■□□□□ 0.01
CSNK1D-213ENST00000580446 ZBTB24O43167 697 aaPredicted RBP15.14■□□□□ 0.01
CSNK1D-213ENST00000580446 NOL4O94818 638 aa15.14■□□□□ 0.01
CSNK1D-213ENST00000580446 PEX3P56589 373 aa15.14■□□□□ 0.01
CSNK1D-213ENST00000580446 SSRP1Q08945 709 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-213ENST00000580446 CALCRLQ16602 461 aa15.14■□□□□ 0.01
CSNK1D-213ENST00000580446 WSCD1Q658N2 575 aa15.14■□□□□ 0.01
CSNK1D-213ENST00000580446 ZNF574Q6ZN55 896 aaPredicted RBP15.14■□□□□ 0.01
CSNK1D-213ENST00000580446 CHPFQ8IZ52 775 aa15.14■□□□□ 0.01
CSNK1D-213ENST00000580446 DRC1Q96MC2 740 aa15.14■□□□□ 0.01
CSNK1D-213ENST00000580446 CFAP97Q9P2B7 532 aa15.14■□□□□ 0.01
CSNK1D-213ENST00000580446 PCDHB5Q9Y5E4 795 aa15.14■□□□□ 0.01
CSNK1D-213ENST00000580446 CREBBPQ92793 2442 aa15.14■□□□□ 0.01
CSNK1D-213ENST00000580446 A0A0A0MRY4 1105 aa15.13■□□□□ 0.01
CSNK1D-213ENST00000580446 LACTBL1A8MY62 500 aa15.13■□□□□ 0.01
CSNK1D-213ENST00000580446 ENC1O14682 589 aa15.13■□□□□ 0.01
CSNK1D-213ENST00000580446 KLK10O43240 276 aa15.13■□□□□ 0.01
CSNK1D-213ENST00000580446 RFPL3O75679 317 aa15.13■□□□□ 0.01
CSNK1D-213ENST00000580446 NPTX2P47972 431 aa15.13■□□□□ 0.01
CSNK1D-213ENST00000580446 ZBTB6Q15916 424 aa15.13■□□□□ 0.01
CSNK1D-213ENST00000580446 BROXQ5VW32 411 aa15.13■□□□□ 0.01
CSNK1D-213ENST00000580446 PYM1Q9BRP8 204 aaKnown RBP15.13■□□□□ 0.01
CSNK1D-213ENST00000580446 LARP6Q9BRS8 491 aaKnown RBP15.13■□□□□ 0.01
CSNK1D-213ENST00000580446 TRIM9Q9C026 710 aa15.13■□□□□ 0.01
CSNK1D-213ENST00000580446 HAPLN2Q9GZV7 340 aa15.13■□□□□ 0.01
CSNK1D-213ENST00000580446 WSB2Q9NYS7 404 aaPredicted RBP15.13■□□□□ 0.01
CSNK1D-213ENST00000580446 UBQLN1Q9UMX0 589 aaKnown RBP15.13■□□□□ 0.01
CSNK1D-213ENST00000580446 CPQQ9Y646 472 aa15.13■□□□□ 0.01
CSNK1D-213ENST00000580446 BOD1L1Q8NFC6 3051 aa15.13■□□□□ 0.01
CSNK1D-213ENST00000580446 NBPF19A0A087WUL8 3843 aa15.12■□□□□ 0.01
CSNK1D-213ENST00000580446 ANO9A1A5B4 782 aa15.12■□□□□ 0.01
CSNK1D-213ENST00000580446 CYB561D2O14569 222 aa15.12■□□□□ 0.01
CSNK1D-213ENST00000580446 TULP3O75386 442 aa15.12■□□□□ 0.01
CSNK1D-213ENST00000580446 XRCC6P12956 609 aaKnown RBP eCLIP15.12■□□□□ 0.013e-10■□□□□ 9.9
CSNK1D-213ENST00000580446 ACAT1P24752 427 aaKnown RBP15.12■□□□□ 0.01
CSNK1D-213ENST00000580446 MATR3P43243 847 aaKnown RBP eCLIP15.12■□□□□ 0.01
CSNK1D-213ENST00000580446 CCT8P50990 548 aa15.12■□□□□ 0.01
CSNK1D-213ENST00000580446 NOLC1Q14978 699 aaKnown RBP eCLIP15.12■□□□□ 0.01
CSNK1D-213ENST00000580446 RNF20Q5VTR2 975 aa15.12■□□□□ 0.01
CSNK1D-213ENST00000580446 FAM124AQ86V42 546 aa15.12■□□□□ 0.01
CSNK1D-213ENST00000580446 SCN4BQ8IWT1 228 aa15.12■□□□□ 0.01
CSNK1D-213ENST00000580446 TRIM22Q8IYM9 498 aa15.12■□□□□ 0.01
CSNK1D-213ENST00000580446 EXD3Q8N9H8 876 aa15.12■□□□□ 0.01
CSNK1D-213ENST00000580446 ZNF248Q8NDW4 579 aa15.12■□□□□ 0.01
CSNK1D-213ENST00000580446 C1orf216Q8TAB5 229 aa15.12■□□□□ 0.01
CSNK1D-213ENST00000580446 FAM212AQ96EL1 285 aa15.12■□□□□ 0.01
CSNK1D-213ENST00000580446 CNDP2Q96KP4 475 aaKnown RBP15.12■□□□□ 0.01
CSNK1D-213ENST00000580446 RNF38Q9H0F5 515 aa15.12■□□□□ 0.01
CSNK1D-213ENST00000580446 KNL1Q8NG31 2342 aa15.12■□□□□ 0.01
CSNK1D-213ENST00000580446 KNTC1P50748 2209 aa15.12■□□□□ 0.01
CSNK1D-213ENST00000580446 TTC26A0AVF1 554 aa15.11■□□□□ 0.01
CSNK1D-213ENST00000580446 HCRTO43612 131 aa15.11■□□□□ 0.01
CSNK1D-213ENST00000580446 ADH1CP00326 375 aa15.11■□□□□ 0.01
CSNK1D-213ENST00000580446 PDIA3P30101 505 aaKnown RBP15.11■□□□□ 0.01
CSNK1D-213ENST00000580446 EIF2DP41214 584 aaKnown RBP15.11■□□□□ 0.01
CSNK1D-213ENST00000580446 VAC14Q08AM6 782 aa15.11■□□□□ 0.01
CSNK1D-213ENST00000580446 UBAP2LQ14157 1087 aaKnown RBP15.11■□□□□ 0.01
CSNK1D-213ENST00000580446 FBXL19Q6PCT2 694 aa15.11■□□□□ 0.01
CSNK1D-213ENST00000580446 TRMT11Q7Z4G4 463 aaKnown RBP15.11■□□□□ 0.01
CSNK1D-213ENST00000580446 METTL23Q86XA0 190 aa15.11■□□□□ 0.01
CSNK1D-213ENST00000580446 THEM5Q8N1Q8 247 aa15.11■□□□□ 0.01
CSNK1D-213ENST00000580446 C2orf15Q8WU43 125 aaKnown RBP15.11■□□□□ 0.01
CSNK1D-213ENST00000580446 UXTQ9UBK9 157 aaPredicted RBP15.11■□□□□ 0.01
CSNK1D-213ENST00000580446 ANKRD6Q9Y2G4 727 aa15.11■□□□□ 0.01
CSNK1D-213ENST00000580446 PCDHB1Q9Y5F3 818 aa15.11■□□□□ 0.01
CSNK1D-213ENST00000580446 DENND4CQ5VZ89 1909 aa15.1■□□□□ 0.01
CSNK1D-213ENST00000580446 METTL12A8MUP2 240 aa15.1■□□□□ 0.01
CSNK1D-213ENST00000580446 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.1■□□□□ 0.01
CSNK1D-213ENST00000580446 SLC16A4O15374 487 aa15.1■□□□□ 0.01
CSNK1D-213ENST00000580446 DEXIO95424 95 aa15.1■□□□□ 0.01
CSNK1D-213ENST00000580446 CYP11A1P05108 521 aa15.1■□□□□ 0.01
CSNK1D-213ENST00000580446 NFICP08651 508 aa15.1■□□□□ 0.01
CSNK1D-213ENST00000580446 GRIK1P39086 918 aa15.1■□□□□ 0.01
CSNK1D-213ENST00000580446 ACADVLP49748 655 aa15.1■□□□□ 0.01
CSNK1D-213ENST00000580446 PCBP4P57723 403 aaKnown RBP15.1■□□□□ 0.01
CSNK1D-213ENST00000580446 PPP2R3AQ06190 1150 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms