RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 ATXN1P54253 815 aaKnown RBP9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 ZXDBP98169 803 aa9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 ORC1Q13415 861 aa9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 CCDC6Q16204 474 aa9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 FBXO43Q4G163 708 aa9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 FILIP1Q7Z7B0 1213 aa9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 FAM35AQ86V20 835 aa9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 NUP93Q8N1F7 819 aa9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 FBXO32Q969P5 355 aa9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 CCDC47Q96A33 483 aaKnown RBP9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 TNIP3Q96KP6 325 aa9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 CEP295NLQ96MC4 621 aa9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 KCNK16Q96T55 309 aa9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 TTLL2Q9BWV7 592 aa9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 RNF38Q9H0F5 515 aa9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 MMRN2Q9H8L6 949 aa9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 TMEM30AQ9NV96 361 aa9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 MAPK8IP1Q9UQF2 711 aa9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 FRMD4BQ9Y2L6 1034 aa9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 ZNF292O60281 2723 aa9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 WDR87Q6ZQQ6 2873 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 ZNF638Q14966 1978 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 DCDC2BA2VCK2 349 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 PDXKO00764 312 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 AP1G2O75843 785 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 RTN3O95197 1032 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 VNN1O95497 513 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 C4BPAP04003 597 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 FAM163BP0C2L3 166 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 IRF1P10914 325 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 CCDC130P13994 396 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 TCF3P15923 654 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 PFKLP17858 780 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 TGM1P22735 817 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 CMA1P23946 247 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 NDUFA8P51970 172 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 SLC5A3P53794 718 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 DMC1Q14565 340 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 AASDHQ4L235 1098 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 C2orf27AQ580R0 203 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 SPOPLQ6IQ16 392 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 PRR23CQ6ZRP0 262 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 CACNA2D4Q7Z3S7 1137 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 ACOT1Q86TX2 421 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 KBTBD6Q86V97 674 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 TTC30AQ86WT1 665 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 GAB3Q8WWW8 586 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 ACDQ96AP0 544 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 NACA2Q9H009 215 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 SDCBP2Q9H190 292 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 ARRDC1-AS1Q9H2J1 176 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 KCTD10Q9H3F6 313 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 DMAP1Q9NPF5 467 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 KRT82Q9NSB4 513 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 FAM49BQ9NUQ9 324 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 CFAP97Q9P2B7 532 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 CHORDC1Q9UHD1 332 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 USP25Q9UHP3 1055 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 DENND4CQ5VZ89 1909 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 F5P12259 2224 aa9.78□□□□□ -0.84
CDK5RAP3-211ENST00000578996 SPTBN4Q9H254 2564 aa9.77□□□□□ -0.84
CDK5RAP3-211ENST00000578996 EP300Q09472 2414 aaPredicted RBP9.77□□□□□ -0.84
CDK5RAP3-211ENST00000578996 GDF9O60383 454 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 LRP3O75074 770 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 KIF20AO95235 890 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 APBB3O95704 486 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 OAS1P00973 400 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 CYP17A1P05093 508 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 MYL1P05976 194 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 TRIM21P19474 475 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 NR2F2P24468 414 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 HOXA6P31267 233 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 DGKEP52429 567 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 NDST1P52848 882 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 MAP3K7CLP57077 242 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 SLC7A9P82251 487 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 CSRP2Q16527 193 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 SGSM1Q2NKQ1 1148 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 SYT13Q7L8C5 426 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 DDX42Q86XP3 938 aaKnown RBP eCLIP9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 SLC9A9Q8IVB4 645 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 CAMKK1Q8N5S9 505 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 C12orf50Q8NA57 414 aaPredicted RBP9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 PDZD8Q8NEN9 1154 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 TSTD1Q8NFU3 115 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 SCAMP5Q8TAC9 235 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 SLC2A14Q8TDB8 520 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 NETO1Q8TDF5 533 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 EZH1Q92800 747 aaPredicted RBP9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 JAKMIP2Q96AA8 810 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 SMARCD1Q96GM5 515 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 RTKNQ9BST9 563 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 TPSD1Q9BZJ3 242 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 IMPG2Q9BZV3 1241 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 VRTNQ9H8Y1 702 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 DMAC2Q9NW81 257 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 GMIPQ9P107 970 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 HMGXB4Q9UGU5 601 aa9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 CIZ1Q9ULV3 898 aaPredicted RBP9.77□□□□□ -0.85
CDK5RAP3-211ENST00000578996 HPSEQ9Y251 543 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms