RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 MFSD10Q14728 455 aa8.65□□□□□ -1.02
SKA2-203ENST00000578105 CCDC142Q17RM4 750 aa8.65□□□□□ -1.02
SKA2-203ENST00000578105 KLHL38Q2WGJ6 581 aa8.65□□□□□ -1.02
SKA2-203ENST00000578105 P3H1Q32P28 736 aa8.65□□□□□ -1.02
SKA2-203ENST00000578105 SV2CQ496J9 727 aa8.65□□□□□ -1.02
SKA2-203ENST00000578105 C2CD6Q53TS8 623 aa8.65□□□□□ -1.02
SKA2-203ENST00000578105 FAM102AQ5T9C2 384 aaPredicted RBP8.65□□□□□ -1.02
SKA2-203ENST00000578105 RNASEH2BQ5TBB1 312 aaKnown RBP8.65□□□□□ -1.02
SKA2-203ENST00000578105 ARHGEF18Q6ZSZ5 1173 aa8.65□□□□□ -1.02
SKA2-203ENST00000578105 FAM43BQ6ZT52 329 aaPredicted RBP8.65□□□□□ -1.02
SKA2-203ENST00000578105 TRIM67Q6ZTA4 783 aa8.65□□□□□ -1.02
SKA2-203ENST00000578105 TADA2BQ86TJ2 420 aa8.65□□□□□ -1.02
SKA2-203ENST00000578105 CCDC25Q86WR0 208 aa8.65□□□□□ -1.02
SKA2-203ENST00000578105 TMEM192Q8IY95 271 aa8.65□□□□□ -1.02
SKA2-203ENST00000578105 CACNA2D3Q8IZS8 1091 aa8.65□□□□□ -1.02
SKA2-203ENST00000578105 KCTD6Q8NC69 237 aa8.65□□□□□ -1.02
SKA2-203ENST00000578105 ATXN2LQ8WWM7 1075 aaKnown RBP8.65□□□□□ -1.02
SKA2-203ENST00000578105 RSAD2Q8WXG1 361 aa8.65□□□□□ -1.02
SKA2-203ENST00000578105 APBB2Q92870 758 aa8.65□□□□□ -1.02
SKA2-203ENST00000578105 ELMO3Q96BJ8 720 aa8.65□□□□□ -1.02
SKA2-203ENST00000578105 GRAMD1AQ96CP6 724 aa8.65□□□□□ -1.02
SKA2-203ENST00000578105 CPB2Q96IY4 423 aa8.65□□□□□ -1.02
SKA2-203ENST00000578105 FAM84AQ96KN4 292 aa8.65□□□□□ -1.02
SKA2-203ENST00000578105 RBM15Q96T37 977 aaKnown RBP eCLIP8.65□□□□□ -1.02
SKA2-203ENST00000578105 ZNF670Q9BS34 389 aa8.65□□□□□ -1.02
SKA2-203ENST00000578105 AP5M1Q9H0R1 490 aa8.65□□□□□ -1.02
SKA2-203ENST00000578105 SSU72Q9NP77 194 aaKnown RBP8.65□□□□□ -1.02
SKA2-203ENST00000578105 RCOR3Q9P2K3 495 aaPredicted RBP8.65□□□□□ -1.02
SKA2-203ENST00000578105 GTF2IRD1Q9UHL9 959 aa8.65□□□□□ -1.02
SKA2-203ENST00000578105 TSPAN16Q9UKR8 245 aa8.65□□□□□ -1.02
SKA2-203ENST00000578105 SMG5Q9UPR3 1016 aaKnown RBP8.65□□□□□ -1.02
SKA2-203ENST00000578105 FAM169AQ9Y6X4 670 aa8.65□□□□□ -1.02
SKA2-203ENST00000578105 PDCD11Q14690 1871 aaKnown RBP8.64□□□□□ -1.03
SKA2-203ENST00000578105 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.64□□□□□ -1.03
SKA2-203ENST00000578105 TLDC2A0PJX2 215 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 C17orf102A2RUQ5 167 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 E7ESA3 106 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 GOLGA8SH3BPF8 625 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 SGK1O00141 431 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 PIRO00625 290 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 CST8O60676 142 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 NPTXRO95502 500 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 CPP00450 1065 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 ZNF865P0CJ78 1059 aaPredicted RBP8.64□□□□□ -1.03
SKA2-203ENST00000578105 GHRP10912 638 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 PDGFRAP16234 1089 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 MIPP30301 263 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 LRPAP1P30533 357 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 SDC4P31431 198 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 GJC1P36383 396 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 RAP1GAPP47736 663 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 NR2C2P49116 596 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 TAF6P49848 677 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 ZNF135P52742 658 aaPredicted RBP8.64□□□□□ -1.03
SKA2-203ENST00000578105 AIF1P55008 147 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 CDH8P55286 799 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 NKX3-2P78367 333 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 PLCB3Q01970 1234 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 XRCC4Q13426 336 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 ITIH4Q14624 930 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 NOMO1Q15155 1222 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 GPR162Q16538 588 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 FBXO47Q5MNV8 452 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 CYP4A22Q5TCH4 519 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 KAZNQ674X7 775 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 OR6B2Q6IFH4 312 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 LLGL2Q6P1M3 1020 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 SLC26A9Q7LBE3 791 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 LIMS2Q7Z4I7 341 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 CPLX4Q7Z7G2 160 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 PHLDB2Q86SQ0 1253 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 RPAINQ86UA6 219 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 RSPH3Q86UC2 560 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 TLK2Q86UE8 772 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 TOP6BLQ8N6T0 577 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 ANKRD52Q8NB46 1076 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 ATP11CQ8NB49 1132 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 JOSD2Q8TAC2 188 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 NPLOC4Q8TAT6 608 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 SLC35F5Q8WV83 523 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 RAPGEF5Q92565 580 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 ARHGEF2Q92974 986 aaKnown RBP8.64□□□□□ -1.03
SKA2-203ENST00000578105 ALKBH8Q96BT7 664 aaKnown RBP8.64□□□□□ -1.03
SKA2-203ENST00000578105 LRRC39Q96DD0 335 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 RTP4Q96DX8 246 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 TWNKQ96RR1 684 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 APBA2Q99767 749 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 FERMT1Q9BQL6 677 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 HERPUD2Q9BSE4 406 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 RASSF4Q9H2L5 321 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 PPANQ9NQ55 473 aaKnown RBP8.64□□□□□ -1.03
SKA2-203ENST00000578105 CHST12Q9NRB3 414 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 SLC38A7Q9NVC3 462 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 PAK5Q9P286 719 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 CYTH4Q9UIA0 394 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 MGAMO43451 1857 aa8.64□□□□□ -1.03
SKA2-203ENST00000578105 GOLGA6L7A0A1B0GV03 622 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 BCLAF3A2AJT9 711 aaKnown RBP8.63□□□□□ -1.03
SKA2-203ENST00000578105 M0QZ92 97 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 CHADO15335 359 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms