RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 TDRKHQ9Y2W6 561 aaKnown RBP15.02■□□□□ -0
SMG6-215ENST00000574501 hCG_1818297A0A087WSY0 165 aa15.02□□□□□ -0.01
SMG6-215ENST00000574501 IPO5O00410 1097 aaKnown RBP15.02□□□□□ -0.01
SMG6-215ENST00000574501 SERPINA6P08185 405 aa15.02□□□□□ -0.01
SMG6-215ENST00000574501 IL1R1P14778 569 aa15.02□□□□□ -0.01
SMG6-215ENST00000574501 RPL22P35268 128 aaKnown RBP15.02□□□□□ -0.01
SMG6-215ENST00000574501 EMP3P54852 163 aa15.02□□□□□ -0.01
SMG6-215ENST00000574501 NCKAP1LP55160 1127 aa15.02□□□□□ -0.01
SMG6-215ENST00000574501 YWHAGP61981 247 aaKnown RBP eCLIP15.02□□□□□ -0.01
SMG6-215ENST00000574501 SH3D19Q5HYK7 790 aa15.02□□□□□ -0.01
SMG6-215ENST00000574501 SPOPLQ6IQ16 392 aa15.02□□□□□ -0.01
SMG6-215ENST00000574501 PCGF5Q86SE9 256 aa15.02□□□□□ -0.01
SMG6-215ENST00000574501 HPS6Q86YV9 775 aa15.02□□□□□ -0.01
SMG6-215ENST00000574501 CRLF3Q8IUI8 442 aa15.02□□□□□ -0.01
SMG6-215ENST00000574501 NUDCD3Q8IVD9 361 aa15.02□□□□□ -0.01
SMG6-215ENST00000574501 PDIK1LQ8N165 341 aa15.02□□□□□ -0.01
SMG6-215ENST00000574501 FEZF2Q8TBJ5 459 aa15.02□□□□□ -0.01
SMG6-215ENST00000574501 PRPF31Q8WWY3 499 aaKnown RBP15.02□□□□□ -0.01
SMG6-215ENST00000574501 HSPBAP1Q96EW2 488 aa15.02□□□□□ -0.01
SMG6-215ENST00000574501 SENP7Q9BQF6 1050 aa15.02□□□□□ -0.01
SMG6-215ENST00000574501 KBTBD13C9JR72 458 aa15.01□□□□□ -0.01
SMG6-215ENST00000574501 SUPT3HO75486 399 aa15.01□□□□□ -0.01
SMG6-215ENST00000574501 SCNN1DP51172 638 aa15.01□□□□□ -0.01
SMG6-215ENST00000574501 BASP1P80723 227 aaKnown RBP15.01□□□□□ -0.01
SMG6-215ENST00000574501 PLOD1Q02809 727 aaPredicted RBP15.01□□□□□ -0.01
SMG6-215ENST00000574501 TFDP3Q5H9I0 405 aa15.01□□□□□ -0.01
SMG6-215ENST00000574501 ATG16L1Q676U5 607 aa15.01□□□□□ -0.01
SMG6-215ENST00000574501 IYDQ6PHW0 289 aa15.01□□□□□ -0.01
SMG6-215ENST00000574501 CTAGE3PQ8IX95 158 aa15.01□□□□□ -0.01
SMG6-215ENST00000574501 SEPT12Q8IYM1 358 aa15.01□□□□□ -0.01
SMG6-215ENST00000574501 SLC44A1Q8WWI5 657 aa15.01□□□□□ -0.01
SMG6-215ENST00000574501 NKD2Q969F2 451 aaPredicted RBP15.01□□□□□ -0.01
SMG6-215ENST00000574501 APOL6Q9BWW8 343 aa15.01□□□□□ -0.01
SMG6-215ENST00000574501 ZNRF3Q9ULT6 936 aa15.01□□□□□ -0.01
SMG6-215ENST00000574501 HBS1LQ9Y450 684 aaKnown RBP15.01□□□□□ -0.01
SMG6-215ENST00000574501 PPME1Q9Y570 386 aa15.01□□□□□ -0.01
SMG6-215ENST00000574501 AVILO75366 819 aa15.01□□□□□ -0.01
SMG6-215ENST00000574501 FDFT1P37268 417 aa15.01□□□□□ -0.01
SMG6-215ENST00000574501 IRX4P78413 519 aa15.01□□□□□ -0.01
SMG6-215ENST00000574501 MRPS5P82675 430 aaKnown RBP15.01□□□□□ -0.01
SMG6-215ENST00000574501 COG7P83436 770 aa15.01□□□□□ -0.01
SMG6-215ENST00000574501 GTF2BQ00403 316 aa15.01□□□□□ -0.01
SMG6-215ENST00000574501 NFIAQ12857 509 aa15.01□□□□□ -0.01
SMG6-215ENST00000574501 CBX3Q13185 183 aa15.01□□□□□ -0.01
SMG6-215ENST00000574501 TEX44Q53QW1 395 aa15.01□□□□□ -0.01
SMG6-215ENST00000574501 PLEKHA7Q6IQ23 1121 aa15.01□□□□□ -0.01
SMG6-215ENST00000574501 SIAH1Q8IUQ4 282 aa15.01□□□□□ -0.01
SMG6-215ENST00000574501 CNBD2Q96M20 576 aa15.01□□□□□ -0.01
SMG6-215ENST00000574501 MMP19Q99542 508 aa15.01□□□□□ -0.01
SMG6-215ENST00000574501 ARHGEF38Q9NXL2 777 aa15.01□□□□□ -0.01
SMG6-215ENST00000574501 PLLPQ9Y342 182 aa15.01□□□□□ -0.01
SMG6-215ENST00000574501 DTNAQ9Y4J8 743 aa15.01□□□□□ -0.01
SMG6-215ENST00000574501 HEMK1Q9Y5R4 338 aaPredicted RBP15.01□□□□□ -0.01
SMG6-215ENST00000574501 E7ESA3 106 aa15□□□□□ -0.01
SMG6-215ENST00000574501 NDC80O14777 642 aa15□□□□□ -0.01
SMG6-215ENST00000574501 AP1G1O43747 822 aa15□□□□□ -0.01
SMG6-215ENST00000574501 CCNT2O60583 730 aaKnown RBP15□□□□□ -0.01
SMG6-215ENST00000574501 NOMO3P69849 1222 aa15□□□□□ -0.01
SMG6-215ENST00000574501 OTUD4Q01804 1114 aaKnown RBP15□□□□□ -0.01
SMG6-215ENST00000574501 ZNF252P-AS1Q0IIN9 211 aa15□□□□□ -0.01
SMG6-215ENST00000574501 BMPR2Q13873 1038 aa15□□□□□ -0.01
SMG6-215ENST00000574501 TRIM67Q6ZTA4 783 aa15□□□□□ -0.01
SMG6-215ENST00000574501 ZNF554Q86TJ5 538 aa15□□□□□ -0.01
SMG6-215ENST00000574501 PPM1NQ8N819 430 aa15□□□□□ -0.01
SMG6-215ENST00000574501 PIP4K2CQ8TBX8 421 aa15□□□□□ -0.01
SMG6-215ENST00000574501 ACTL9Q8TC94 416 aa15□□□□□ -0.01
SMG6-215ENST00000574501 RBM38Q9H0Z9 239 aaKnown RBP15□□□□□ -0.01
SMG6-215ENST00000574501 SUDS3Q9H7L9 328 aaPredicted RBP15□□□□□ -0.01
SMG6-215ENST00000574501 C17orf75Q9HAS0 396 aa15□□□□□ -0.01
SMG6-215ENST00000574501 C1orf112Q9NSG2 853 aa15□□□□□ -0.01
SMG6-215ENST00000574501 CDH22Q9UJ99 828 aa15□□□□□ -0.01
SMG6-215ENST00000574501 POMPQ9Y244 141 aa15□□□□□ -0.01
SMG6-215ENST00000574501 MAD1L1Q9Y6D9 718 aa15□□□□□ -0.01
SMG6-215ENST00000574501 SDR42E2A6NKP2 422 aa15□□□□□ -0.01
SMG6-215ENST00000574501 TOP3BO95985 862 aaKnown RBP15□□□□□ -0.01
SMG6-215ENST00000574501 HLA-DOAP06340 250 aa15□□□□□ -0.01
SMG6-215ENST00000574501 WEE2P0C1S8 567 aa15□□□□□ -0.01
SMG6-215ENST00000574501 AOC1P19801 751 aa15□□□□□ -0.01
SMG6-215ENST00000574501 FUT4P22083 530 aa15□□□□□ -0.01
SMG6-215ENST00000574501 CDKN2BP42772 138 aa15□□□□□ -0.01
SMG6-215ENST00000574501 ALDH1A3P47895 512 aa15□□□□□ -0.01
SMG6-215ENST00000574501 XIAPP98170 497 aa15□□□□□ -0.01
SMG6-215ENST00000574501 GCNT1Q02742 428 aa15□□□□□ -0.01
SMG6-215ENST00000574501 TCP10Q12799 353 aa15□□□□□ -0.01
SMG6-215ENST00000574501 SNAPC2Q13487 334 aa15□□□□□ -0.01
SMG6-215ENST00000574501 DCTN2Q13561 401 aaKnown RBP15□□□□□ -0.01
SMG6-215ENST00000574501 SMTNL2Q2TAL5 461 aa15□□□□□ -0.01
SMG6-215ENST00000574501 CEP55Q53EZ4 464 aa15□□□□□ -0.01
SMG6-215ENST00000574501 TSHZ1Q6ZSZ6 1077 aa15□□□□□ -0.01
SMG6-215ENST00000574501 SLC35B2Q8TB61 432 aa15□□□□□ -0.01
SMG6-215ENST00000574501 RSAD2Q8WXG1 361 aa15□□□□□ -0.01
SMG6-215ENST00000574501 CFAP36Q96G28 342 aa15□□□□□ -0.01
SMG6-215ENST00000574501 MCEEQ96PE7 176 aa15□□□□□ -0.01
SMG6-215ENST00000574501 PRPF18Q99633 342 aaKnown RBP15□□□□□ -0.01
SMG6-215ENST00000574501 SENP6Q9GZR1 1112 aaPredicted RBP15□□□□□ -0.01
SMG6-215ENST00000574501 BTBD7Q9P203 1132 aa15□□□□□ -0.01
SMG6-215ENST00000574501 IP6K2Q9UHH9 426 aa15□□□□□ -0.01
SMG6-215ENST00000574501 PACSIN3Q9UKS6 424 aa15□□□□□ -0.01
SMG6-215ENST00000574501 LOC100653049A0A140TA62 436 aa14.99□□□□□ -0.01
SMG6-215ENST00000574501 TTLL13PA6NNM8 815 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms