RNA–Protein interactions for RNA: ENST00000573891.6

CACNA1A-203, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-203ENST00000573891 PAX3P23760 479 aa6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 CDC25CP30307 473 aa6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 DNAJA1P31689 397 aaKnown RBP6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 TUFMP49411 452 aaKnown RBP6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 SLC12A3P55017 1021 aa6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 NCKAP1LP55160 1127 aa6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 CYP4F8P98187 520 aa6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 POU5F1Q01860 360 aaKnown RBP6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 PPP2R3AQ06190 1150 aa6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 ITPRIPL2Q3MIP1 535 aa6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 AASDHQ4L235 1098 aaPredicted RBP6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 ZNF394Q53GI3 561 aa6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 ARHGAP15Q53QZ3 475 aa6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 TMEM196Q5HYL7 178 aa6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 N4BP2L1Q5TBK1 243 aaPredicted RBP6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 SPATA1Q5VX52 437 aa6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 C9orf57Q5W0N0 161 aa6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 FSTL4Q6MZW2 842 aa6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 ARMCX5Q6P1M9 558 aa6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 DSTYKQ6XUX3 929 aa6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 DTHD1Q6ZMT9 781 aa6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 CACNA2D4Q7Z3S7 1137 aa6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 KBTBD6Q86V97 674 aa6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 SYT2Q8N9I0 419 aaPredicted RBP6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 C12orf50Q8NA57 414 aaPredicted RBP6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 BICD1Q96G01 975 aa6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 SENP8Q96LD8 212 aa6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 PNMA5Q96PV4 448 aa6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 ARPC5LQ9BPX5 153 aa6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 LPIN3Q9BQK8 851 aa6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 FAM83CQ9BQN1 747 aa6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 SLC46A2Q9BY10 475 aa6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 ZCWPW1Q9H0M4 648 aa6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 ARRDC1-AS1Q9H2J1 176 aa6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 SRA1Q9HD15 236 aaKnown RBP6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 ZMYM5Q9UJ78 669 aa6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 TPX2Q9ULW0 747 aaKnown RBP6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 PCDHGA5Q9Y5G8 931 aa6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 ZZEF1O43149 2961 aa6.51□□□□□ -1.37
CACNA1A-203ENST00000573891 CACNA1EQ15878 2313 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 PDCD11Q14690 1871 aaKnown RBP6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 A0A0B4J269 797 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 NPHP3-ACAD11A0A0J9YXS1 232 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 PIRO00625 290 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 TRDMT1O14717 391 aaKnown RBP6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 AXIN1O15169 862 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 NFICP08651 508 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 PLA2G4BP0C869 781 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 PAX7P23759 505 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 MPLP40238 635 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 MATR3P43243 847 aaKnown RBP eCLIP6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 PXNP49023 591 aaPredicted RBP6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 LIG4P49917 911 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 ZNF131P52739 623 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 NLRP12P59046 1061 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 ATP2C1P98194 919 aaPredicted RBP6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 GRSF1Q12849 480 aaKnown RBP eCLIP6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 CLN3Q13286 438 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 VEPH1Q14D04 833 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 PTPAQ15257 358 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 CCDC6Q16204 474 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 TMEM119Q4V9L6 283 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 ARSHQ5FYA8 562 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 STPG1Q5TH74 334 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 ICE2Q659A1 982 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 JADE1Q6IE81 842 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 SLC39A4Q6P5W5 647 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 TMEM150AQ86TG1 271 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 TREML1Q86YW5 311 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 CD302Q8IX05 232 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 CMTM8Q8IZV2 173 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 CAMKK1Q8N5S9 505 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 C2orf15Q8WU43 125 aaKnown RBP6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 CHAMP1Q96JM3 812 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 ZC3H10Q96K80 434 aaKnown RBP6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 GCNAQ96QF7 691 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 SEPT5Q99719 369 aaPredicted RBP6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 SLX1AQ9BQ83 275 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 LSM14BQ9BX40 385 aaKnown RBP6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 PHACTR1Q9C0D0 580 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 CCSER1Q9C0I3 900 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 SMG9Q9H0W8 520 aaKnown RBP6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 RPF1Q9H9Y2 349 aaKnown RBP6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 HPS4Q9NQG7 708 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 GKN1Q9NS71 199 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 THG1LQ9NWX6 298 aaKnown RBP6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 LARSQ9P2J5 1176 aaKnown RBP6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 CPSF3Q9UKF6 684 aaKnown RBP6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 ODF2LQ9ULJ1 636 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 TBX20Q9UMR3 447 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 CCL26Q9Y258 94 aa6.5□□□□□ -1.37
CACNA1A-203ENST00000573891 NUP210Q8TEM1 1887 aaPredicted RBP6.49□□□□□ -1.37
CACNA1A-203ENST00000573891 KIF26AQ9ULI4 1882 aaPredicted RBP6.49□□□□□ -1.37
CACNA1A-203ENST00000573891 GREB1Q4ZG55 1949 aa6.49□□□□□ -1.37
CACNA1A-203ENST00000573891 TLDC2A0PJX2 215 aa6.49□□□□□ -1.37
CACNA1A-203ENST00000573891 SOBPA7XYQ1 873 aa6.49□□□□□ -1.37
CACNA1A-203ENST00000573891 ATG13O75143 517 aa6.49□□□□□ -1.37
CACNA1A-203ENST00000573891 PEX14O75381 377 aa6.49□□□□□ -1.37
CACNA1A-203ENST00000573891 KCNK5O95279 499 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms