RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 FAM163BP0C2L3 166 aa23.42■■□□□ 1.34
SNF8-216ENST00000573795 SEC13P55735 322 aa23.42■■□□□ 1.34
SNF8-216ENST00000573795 TAF10Q12962 218 aa23.42■■□□□ 1.34
SNF8-216ENST00000573795 WDR72Q3MJ13 1102 aa23.42■■□□□ 1.34
SNF8-216ENST00000573795 N4BP2L1Q5TBK1 243 aaPredicted RBP23.42■■□□□ 1.34
SNF8-216ENST00000573795 UNC13DQ70J99 1090 aa23.42■■□□□ 1.34
SNF8-216ENST00000573795 HS2ST1Q7LGA3 356 aa23.42■■□□□ 1.34
SNF8-216ENST00000573795 RASSF3Q86WH2 238 aa23.42■■□□□ 1.34
SNF8-216ENST00000573795 KIAA1958Q8N8K9 716 aa23.42■■□□□ 1.34
SNF8-216ENST00000573795 XXYLT1Q8NBI6 393 aa23.42■■□□□ 1.34
SNF8-216ENST00000573795 PLEKHO2Q8TD55 490 aa23.42■■□□□ 1.34
SNF8-216ENST00000573795 FNBP1Q96RU3 617 aa23.42■■□□□ 1.34
SNF8-216ENST00000573795 B3GNT5Q9BYG0 378 aa23.42■■□□□ 1.34
SNF8-216ENST00000573795 TPSD1Q9BZJ3 242 aa23.42■■□□□ 1.34
SNF8-216ENST00000573795 SMPD4Q9NXE4 827 aa23.42■■□□□ 1.34
SNF8-216ENST00000573795 FRYQ5TBA9 3013 aa23.42■■□□□ 1.34
SNF8-216ENST00000573795 THADAQ6YHU6 1953 aa23.41■■□□□ 1.34
SNF8-216ENST00000573795 CEP295Q9C0D2 2601 aa23.41■■□□□ 1.34
SNF8-216ENST00000573795 K7ELQ4 463 aaPredicted RBP23.41■■□□□ 1.34
SNF8-216ENST00000573795 CLDN5O00501 218 aa23.41■■□□□ 1.34
SNF8-216ENST00000573795 CUTAO60888 179 aa23.41■■□□□ 1.34
SNF8-216ENST00000573795 YEATS4O95619 227 aa23.41■■□□□ 1.34
SNF8-216ENST00000573795 HNRNPLP14866 589 aaKnown RBP eCLIP23.41■■□□□ 1.34
SNF8-216ENST00000573795 PMLP29590 882 aa23.41■■□□□ 1.34
SNF8-216ENST00000573795 PPP3CCP48454 512 aa23.41■■□□□ 1.34
SNF8-216ENST00000573795 DGKEP52429 567 aa23.41■■□□□ 1.34
SNF8-216ENST00000573795 MYL6P60660 151 aa23.41■■□□□ 1.34
SNF8-216ENST00000573795 AMPD3Q01432 767 aa23.41■■□□□ 1.34
SNF8-216ENST00000573795 ELF2Q15723 593 aa23.41■■□□□ 1.34
SNF8-216ENST00000573795 BMT2Q1RMZ1 405 aa23.41■■□□□ 1.34
SNF8-216ENST00000573795 C2orf27AQ580R0 203 aa23.41■■□□□ 1.34
SNF8-216ENST00000573795 ADGRG2Q8IZP9 1017 aa23.41■■□□□ 1.34
SNF8-216ENST00000573795 IQUBQ8NA54 791 aa23.41■■□□□ 1.34
SNF8-216ENST00000573795 TSTD1Q8NFU3 115 aa23.41■■□□□ 1.34
SNF8-216ENST00000573795 ELOVL4Q9GZR5 314 aa23.41■■□□□ 1.34
SNF8-216ENST00000573795 EHD2Q9NZN4 543 aa23.41■■□□□ 1.34
SNF8-216ENST00000573795 MMP17Q9ULZ9 603 aa23.41■■□□□ 1.34
SNF8-216ENST00000573795 INVSQ9Y283 1065 aa23.41■■□□□ 1.34
SNF8-216ENST00000573795 BCLAF3A2AJT9 711 aaKnown RBP23.4■■□□□ 1.34
SNF8-216ENST00000573795 RHOBTB1O94844 696 aa23.4■■□□□ 1.34
SNF8-216ENST00000573795 SLC6A11P48066 632 aa23.4■■□□□ 1.34
SNF8-216ENST00000573795 CASP4P49662 377 aa23.4■■□□□ 1.34
SNF8-216ENST00000573795 SNRPFP62306 86 aaKnown RBP23.4■■□□□ 1.34
SNF8-216ENST00000573795 TNNC1P63316 161 aa23.4■■□□□ 1.34
SNF8-216ENST00000573795 DHCR24Q15392 516 aa23.4■■□□□ 1.34
SNF8-216ENST00000573795 PMS2CLQ68D20 193 aa23.4■■□□□ 1.34
SNF8-216ENST00000573795 C12orf40Q86WS4 652 aa23.4■■□□□ 1.34
SNF8-216ENST00000573795 C12orf56Q8IXR9 622 aa23.4■■□□□ 1.34
SNF8-216ENST00000573795 B3GALNT2Q8NCR0 500 aa23.4■■□□□ 1.34
SNF8-216ENST00000573795 BLZF1Q9H2G9 400 aa23.4■■□□□ 1.34
SNF8-216ENST00000573795 CFAP47Q6ZTR5 3102 aa23.39■■□□□ 1.34
SNF8-216ENST00000573795 TNRC6BQ9UPQ9 1833 aaKnown RBP23.39■■□□□ 1.33
SNF8-216ENST00000573795 BCKDHBP21953 392 aa23.39■■□□□ 1.33
SNF8-216ENST00000573795 CREB5Q02930 508 aa23.39■■□□□ 1.33
SNF8-216ENST00000573795 TDRD10Q5VZ19 366 aaKnown RBP23.39■■□□□ 1.33
SNF8-216ENST00000573795 ANO7Q6IWH7 933 aa23.39■■□□□ 1.33
SNF8-216ENST00000573795 RHBDF2Q6PJF5 856 aa23.39■■□□□ 1.33
SNF8-216ENST00000573795 TMEM92Q6UXU6 159 aa23.39■■□□□ 1.33
SNF8-216ENST00000573795 CCDC33Q8N5R6 958 aa23.39■■□□□ 1.33
SNF8-216ENST00000573795 MDGA1Q8NFP4 955 aa23.39■■□□□ 1.33
SNF8-216ENST00000573795 CCDC26Q8TAB7 109 aa23.39■■□□□ 1.33
SNF8-216ENST00000573795 ZFRQ96KR1 1074 aaKnown RBP23.39■■□□□ 1.33
SNF8-216ENST00000573795 CNOT6LQ96LI5 555 aaKnown RBP23.39■■□□□ 1.33
SNF8-216ENST00000573795 ZNF396Q96N95 335 aaPredicted RBP23.39■■□□□ 1.33
SNF8-216ENST00000573795 LSM14BQ9BX40 385 aaKnown RBP23.39■■□□□ 1.33
SNF8-216ENST00000573795 SMYD3Q9H7B4 428 aa23.39■■□□□ 1.33
SNF8-216ENST00000573795 CFAP97Q9P2B7 532 aa23.39■■□□□ 1.33
SNF8-216ENST00000573795 NXF1Q9UBU9 619 aaKnown RBP23.39■■□□□ 1.33
SNF8-216ENST00000573795 A8MXQ7 604 aa23.38■■□□□ 1.33
SNF8-216ENST00000573795 POLR2DO15514 142 aaKnown RBP23.38■■□□□ 1.33
SNF8-216ENST00000573795 CAVIN2O95810 425 aa23.38■■□□□ 1.33
SNF8-216ENST00000573795 ABL1P00519 1130 aa23.38■■□□□ 1.33
SNF8-216ENST00000573795 IFRD2Q12894 506 aaPredicted RBP23.38■■□□□ 1.33
SNF8-216ENST00000573795 CRY1Q16526 586 aa23.38■■□□□ 1.33
SNF8-216ENST00000573795 ST3GAL2Q16842 350 aa23.38■■□□□ 1.33
SNF8-216ENST00000573795 RNF43Q68DV7 783 aa23.38■■□□□ 1.33
SNF8-216ENST00000573795 PAQR9Q6ZVX9 377 aa23.38■■□□□ 1.33
SNF8-216ENST00000573795 ELMO3Q96BJ8 720 aa23.38■■□□□ 1.33
SNF8-216ENST00000573795 SLITRK1Q96PX8 696 aa23.38■■□□□ 1.33
SNF8-216ENST00000573795 EDEM2Q9BV94 578 aa23.38■■□□□ 1.33
SNF8-216ENST00000573795 VRTNQ9H8Y1 702 aa23.38■■□□□ 1.33
SNF8-216ENST00000573795 MAGEF1Q9HAY2 307 aa23.38■■□□□ 1.33
SNF8-216ENST00000573795 SLC39A2Q9NP94 309 aa23.38■■□□□ 1.33
SNF8-216ENST00000573795 KCNK5O95279 499 aa23.37■■□□□ 1.33
SNF8-216ENST00000573795 ATICP31939 592 aa23.37■■□□□ 1.33
SNF8-216ENST00000573795 GBP1P32455 592 aa23.37■■□□□ 1.33
SNF8-216ENST00000573795 CDH8P55286 799 aa23.37■■□□□ 1.33
SNF8-216ENST00000573795 CUL4BQ13620 913 aa23.37■■□□□ 1.33
SNF8-216ENST00000573795 NUP93Q8N1F7 819 aa23.37■■□□□ 1.33
SNF8-216ENST00000573795 OLIG1Q8TAK6 271 aa23.37■■□□□ 1.33
SNF8-216ENST00000573795 KCNK16Q96T55 309 aa23.37■■□□□ 1.33
SNF8-216ENST00000573795 PLXND1Q9Y4D7 1925 aa23.37■■□□□ 1.33
SNF8-216ENST00000573795 LNP1A1A4G5 178 aa23.36■■□□□ 1.33
SNF8-216ENST00000573795 SLC9A3R1O14745 358 aaPredicted RBP23.36■■□□□ 1.33
SNF8-216ENST00000573795 TNFRSF10BO14763 440 aa23.36■■□□□ 1.33
SNF8-216ENST00000573795 COCHO43405 550 aa23.36■■□□□ 1.33
SNF8-216ENST00000573795 MBL2P11226 248 aaPredicted RBP23.36■■□□□ 1.33
SNF8-216ENST00000573795 YWHAQP27348 245 aa23.36■■□□□ 1.33
SNF8-216ENST00000573795 EIF2DP41214 584 aaKnown RBP23.36■■□□□ 1.33
SNF8-216ENST00000573795 MRPS21P82921 87 aaKnown RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms