RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 C1orf228Q6PIY5 440 aa17.52■□□□□ 0.4
LITAF-209ENST00000571688 CRLF3Q8IUI8 442 aa17.52■□□□□ 0.4
LITAF-209ENST00000571688 METTL25Q8N6Q8 603 aa17.52■□□□□ 0.4
LITAF-209ENST00000571688 SMYD3Q9H7B4 428 aa17.52■□□□□ 0.4
LITAF-209ENST00000571688 TIMMDC1Q9NPL8 285 aa17.52■□□□□ 0.4
LITAF-209ENST00000571688 XPO7Q9UIA9 1087 aaKnown RBP17.52■□□□□ 0.4
LITAF-209ENST00000571688 EXOC7Q9UPT5 735 aa17.52■□□□□ 0.4
LITAF-209ENST00000571688 TTLL13PA6NNM8 815 aa17.52■□□□□ 0.4
LITAF-209ENST00000571688 CLPTM1O96005 669 aa17.52■□□□□ 0.4
LITAF-209ENST00000571688 IRX4P78413 519 aa17.52■□□□□ 0.4
LITAF-209ENST00000571688 MRPS5P82675 430 aaKnown RBP17.52■□□□□ 0.4
LITAF-209ENST00000571688 WASHC5Q12768 1159 aa17.52■□□□□ 0.4
LITAF-209ENST00000571688 NFIAQ12857 509 aa17.52■□□□□ 0.4
LITAF-209ENST00000571688 NADK2Q4G0N4 442 aa17.52■□□□□ 0.4
LITAF-209ENST00000571688 PLA2G4FQ68DD2 849 aa17.52■□□□□ 0.4
LITAF-209ENST00000571688 USP37Q86T82 979 aa17.52■□□□□ 0.4
LITAF-209ENST00000571688 MAP4K3Q8IVH8 894 aa17.52■□□□□ 0.4
LITAF-209ENST00000571688 ZFPM1Q8IX07 1006 aa17.52■□□□□ 0.4
LITAF-209ENST00000571688 ICA1LQ8NDH6 482 aa17.52■□□□□ 0.4
LITAF-209ENST00000571688 ACSF2Q96CM8 615 aaPredicted RBP17.52■□□□□ 0.4
LITAF-209ENST00000571688 RILPQ96NA2 401 aa17.52■□□□□ 0.4
LITAF-209ENST00000571688 EBF4Q9BQW3 602 aa17.52■□□□□ 0.4
LITAF-209ENST00000571688 C10orf88Q9H8K7 445 aa17.52■□□□□ 0.4
LITAF-209ENST00000571688 TRIM49D1C9J1S8 452 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 DENRO43583 198 aaKnown RBP17.51■□□□□ 0.39
LITAF-209ENST00000571688 STRNO43815 780 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 P4HBP07237 508 aaKnown RBP17.51■□□□□ 0.39
LITAF-209ENST00000571688 ELK3P41970 407 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 EMP3P54852 163 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 DBN1Q16643 649 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 RALGPS1Q5JS13 557 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 TTC39BQ5VTQ0 682 aaPredicted RBP17.51■□□□□ 0.39
LITAF-209ENST00000571688 C15orf39Q6ZRI6 1047 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 RAB3IL1Q8TBN0 382 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 FAM84AQ96KN4 292 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 RIT2Q99578 217 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 C20orf27Q9GZN8 174 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 GPRC5CQ9NQ84 441 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 POLLQ9UGP5 575 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 TBX20Q9UMR3 447 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 SF3B1O75533 1304 aaKnown RBP eCLIP17.51■□□□□ 0.39
LITAF-209ENST00000571688 KBTBD13C9JR72 458 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 DDX39AO00148 427 aaKnown RBP17.51■□□□□ 0.39
LITAF-209ENST00000571688 VIL1P09327 827 aaKnown RBP17.51■□□□□ 0.39
LITAF-209ENST00000571688 ACO1P21399 889 aaKnown RBP17.51■□□□□ 0.39
LITAF-209ENST00000571688 SSTR3P32745 418 aaPredicted RBP17.51■□□□□ 0.39
LITAF-209ENST00000571688 FDFT1P37268 417 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 OTUD4Q01804 1114 aaKnown RBP17.51■□□□□ 0.39
LITAF-209ENST00000571688 MTMR2Q13614 643 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 CYLC2Q14093 348 aaPredicted RBP17.51■□□□□ 0.39
LITAF-209ENST00000571688 TLR1Q15399 786 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 OGFRL1Q5TC84 451 aaPredicted RBP17.51■□□□□ 0.39
LITAF-209ENST00000571688 MIER3Q7Z3K6 550 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 ACTL9Q8TC94 416 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 DDX56Q9NY93 547 aaKnown RBP17.51■□□□□ 0.39
LITAF-209ENST00000571688 PLK2Q9NYY3 685 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 PRR12Q9ULL5 1215 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 SLX4Q8IY92 1834 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 A0A0B4J269 797 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 CCDC195A0A1B0GUA6 201 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 F8VP50 259 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 STK10O94804 968 aaKnown RBP17.51■□□□□ 0.39
LITAF-209ENST00000571688 SORBS2O94875 1100 aaKnown RBP17.51■□□□□ 0.39
LITAF-209ENST00000571688 C1QAP02745 245 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 POLR2MP0CAP2 368 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 RAG1P15918 1043 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 TUBB3Q13509 450 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 CERS5Q8N5B7 392 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 ACTRT2Q8TDY3 377 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 GAB3Q8WWW8 586 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 SUDS3Q9H7L9 328 aaPredicted RBP17.51■□□□□ 0.39
LITAF-209ENST00000571688 DDX18Q9NVP1 670 aaKnown RBP17.51■□□□□ 0.39
LITAF-209ENST00000571688 MKS1Q9NXB0 559 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 SAE1Q9UBE0 346 aaPredicted RBP17.51■□□□□ 0.39
LITAF-209ENST00000571688 DMTF1Q9Y222 760 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 MAD1L1Q9Y6D9 718 aa17.51■□□□□ 0.39
LITAF-209ENST00000571688 H3BNX3 289 aa17.5■□□□□ 0.39
LITAF-209ENST00000571688 ADARP55265 1226 aaKnown RBP17.5■□□□□ 0.39
LITAF-209ENST00000571688 PPP1R2P3Q6NXS1 205 aa17.5■□□□□ 0.39
LITAF-209ENST00000571688 SLC39A4Q6P5W5 647 aa17.5■□□□□ 0.39
LITAF-209ENST00000571688 SLC26A11Q86WA9 606 aa17.5■□□□□ 0.39
LITAF-209ENST00000571688 NUDCD3Q8IVD9 361 aa17.5■□□□□ 0.39
LITAF-209ENST00000571688 TAB3Q8N5C8 712 aaPredicted RBP17.5■□□□□ 0.39
LITAF-209ENST00000571688 DIS3LQ8TF46 1054 aaKnown RBP17.5■□□□□ 0.39
LITAF-209ENST00000571688 MAML3Q96JK9 1138 aa17.5■□□□□ 0.39
LITAF-209ENST00000571688 CLMNQ96JQ2 1002 aa17.5■□□□□ 0.39
LITAF-209ENST00000571688 ZFRQ96KR1 1074 aaKnown RBP17.5■□□□□ 0.39
LITAF-209ENST00000571688 MRPS26Q9BYN8 205 aaKnown RBP17.5■□□□□ 0.39
LITAF-209ENST00000571688 CDH22Q9UJ99 828 aa17.5■□□□□ 0.39
LITAF-209ENST00000571688 TEX264Q9Y6I9 313 aa17.5■□□□□ 0.39
LITAF-209ENST00000571688 ASTN2O75129 1339 aaPredicted RBP17.5■□□□□ 0.39
LITAF-209ENST00000571688 C3orf70A6NLC5 250 aaPredicted RBP17.5■□□□□ 0.39
LITAF-209ENST00000571688 SPAG6O75602 509 aa17.5■□□□□ 0.39
LITAF-209ENST00000571688 PDE5AO76074 875 aa17.5■□□□□ 0.39
LITAF-209ENST00000571688 GNA15P30679 374 aa17.5■□□□□ 0.39
LITAF-209ENST00000571688 CLCN2P51788 898 aa17.5■□□□□ 0.39
LITAF-209ENST00000571688 EPHB1P54762 984 aa17.5■□□□□ 0.39
LITAF-209ENST00000571688 OGDHQ02218 1023 aa17.5■□□□□ 0.39
LITAF-209ENST00000571688 ENPEPQ07075 957 aa17.5■□□□□ 0.39
LITAF-209ENST00000571688 RABGAP1LQ5R372 815 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms