RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 SCUBE3Q8IX30 993 aa19■□□□□ 0.63
SMPD3-211ENST00000568373 ANKRD52Q8NB46 1076 aa19■□□□□ 0.63
SMPD3-211ENST00000568373 TRIB2Q92519 343 aa19■□□□□ 0.63
SMPD3-211ENST00000568373 CALN1Q9BXU9 219 aa19■□□□□ 0.63
SMPD3-211ENST00000568373 SNX25Q9H3E2 840 aa19■□□□□ 0.63
SMPD3-211ENST00000568373 RSAD1Q9HA92 442 aa19■□□□□ 0.63
SMPD3-211ENST00000568373 ABT1Q9ULW3 272 aaKnown RBP19■□□□□ 0.63
SMPD3-211ENST00000568373 CDY2AQ9Y6F7 541 aa19■□□□□ 0.63
SMPD3-211ENST00000568373 PRPSAP2O60256 369 aa18.99■□□□□ 0.63
SMPD3-211ENST00000568373 GABBR2O75899 941 aa18.99■□□□□ 0.63
SMPD3-211ENST00000568373 ENDOD1O94919 500 aa18.99■□□□□ 0.63
SMPD3-211ENST00000568373 CCDC130P13994 396 aa18.99■□□□□ 0.63
SMPD3-211ENST00000568373 TM4SF4P48230 202 aa18.99■□□□□ 0.63
SMPD3-211ENST00000568373 BCAT1P54687 386 aa18.99■□□□□ 0.63
SMPD3-211ENST00000568373 BST2Q10589 180 aaKnown RBP18.99■□□□□ 0.63
SMPD3-211ENST00000568373 KYNUQ16719 465 aa18.99■□□□□ 0.63
SMPD3-211ENST00000568373 CDO1Q16878 200 aa18.99■□□□□ 0.63
SMPD3-211ENST00000568373 NBPF20Q3BBV1 942 aa18.99■□□□□ 0.63
SMPD3-211ENST00000568373 ZNF618Q5T7W0 954 aa18.99■□□□□ 0.63
SMPD3-211ENST00000568373 RFX6Q8HWS3 928 aa18.99■□□□□ 0.63
SMPD3-211ENST00000568373 KHSRPQ92945 711 aaKnown RBP eCLIP18.99■□□□□ 0.63
SMPD3-211ENST00000568373 CFAP57Q96MR6 1250 aa18.99■□□□□ 0.63
SMPD3-211ENST00000568373 DNAI2Q9GZS0 605 aa18.99■□□□□ 0.63
SMPD3-211ENST00000568373 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.99■□□□□ 0.63
SMPD3-211ENST00000568373 NINJ2Q9NZG7 142 aa18.99■□□□□ 0.63
SMPD3-211ENST00000568373 TPX2Q9ULW0 747 aaKnown RBP18.99■□□□□ 0.63
SMPD3-211ENST00000568373 TRPV2Q9Y5S1 764 aa18.99■□□□□ 0.63
SMPD3-211ENST00000568373 APOC4-APOC2K7ER74 178 aa18.99■□□□□ 0.63
SMPD3-211ENST00000568373 PTGESO14684 152 aa18.99■□□□□ 0.63
SMPD3-211ENST00000568373 PGK1P00558 417 aa18.99■□□□□ 0.63
SMPD3-211ENST00000568373 AGTP01019 485 aa18.99■□□□□ 0.63
SMPD3-211ENST00000568373 APOC2P02655 101 aa18.99■□□□□ 0.63
SMPD3-211ENST00000568373 LILRA4P59901 499 aa18.99■□□□□ 0.63
SMPD3-211ENST00000568373 PTGISQ16647 500 aa18.99■□□□□ 0.63
SMPD3-211ENST00000568373 RAB6CQ53S08 254 aa18.99■□□□□ 0.63
SMPD3-211ENST00000568373 MFSD5Q6N075 450 aa18.99■□□□□ 0.63
SMPD3-211ENST00000568373 ARHGAP39Q9C0H5 1083 aa18.99■□□□□ 0.63
SMPD3-211ENST00000568373 RAB6CQ9H0N0 254 aa18.99■□□□□ 0.63
SMPD3-211ENST00000568373 STMN4Q9H169 189 aaPredicted RBP18.99■□□□□ 0.63
SMPD3-211ENST00000568373 UPF3AQ9H1J1 476 aaKnown RBP18.99■□□□□ 0.63
SMPD3-211ENST00000568373 EPN3Q9H201 632 aa18.99■□□□□ 0.63
SMPD3-211ENST00000568373 CNOT10Q9H9A5 744 aaKnown RBP18.99■□□□□ 0.63
SMPD3-211ENST00000568373 SRRM3A6NNA2 597 aaPredicted RBP18.98■□□□□ 0.63
SMPD3-211ENST00000568373 NDC80O14777 642 aa18.98■□□□□ 0.63
SMPD3-211ENST00000568373 HUS1O60921 280 aa18.98■□□□□ 0.63
SMPD3-211ENST00000568373 ADORA2BP29275 332 aa18.98■□□□□ 0.63
SMPD3-211ENST00000568373 LRPAP1P30533 357 aa18.98■□□□□ 0.63
SMPD3-211ENST00000568373 SDC4P31431 198 aa18.98■□□□□ 0.63
SMPD3-211ENST00000568373 SLCO1A2P46721 670 aa18.98■□□□□ 0.63
SMPD3-211ENST00000568373 CDH6P55285 790 aa18.98■□□□□ 0.63
SMPD3-211ENST00000568373 ATP11AP98196 1134 aa18.98■□□□□ 0.63
SMPD3-211ENST00000568373 MORF4L2Q15014 288 aa18.98■□□□□ 0.63
SMPD3-211ENST00000568373 TNFAIP8L3Q5GJ75 292 aa18.98■□□□□ 0.63
SMPD3-211ENST00000568373 GDF6Q6KF10 455 aaPredicted RBP18.98■□□□□ 0.63
SMPD3-211ENST00000568373 RSPH3Q86UC2 560 aa18.98■□□□□ 0.63
SMPD3-211ENST00000568373 ADGRF2Q8IZF7 708 aa18.98■□□□□ 0.63
SMPD3-211ENST00000568373 PPP1R10Q96QC0 940 aaKnown RBP18.98■□□□□ 0.63
SMPD3-211ENST00000568373 ZIC5Q96T25 663 aa18.98■□□□□ 0.63
SMPD3-211ENST00000568373 B3GNT5Q9BYG0 378 aa18.98■□□□□ 0.63
SMPD3-211ENST00000568373 SPC25Q9HBM1 224 aa18.98■□□□□ 0.63
SMPD3-211ENST00000568373 GABRQQ9UN88 632 aa18.98■□□□□ 0.63
SMPD3-211ENST00000568373 IFNB1P01574 187 aa18.97■□□□□ 0.63
SMPD3-211ENST00000568373 HTRA3P83110 453 aa18.97■□□□□ 0.63
SMPD3-211ENST00000568373 AUHQ13825 339 aaKnown RBP18.97■□□□□ 0.63
SMPD3-211ENST00000568373 TOP6BLQ8N6T0 577 aa18.97■□□□□ 0.63
SMPD3-211ENST00000568373 ZFP42Q96MM3 310 aa18.97■□□□□ 0.63
SMPD3-211ENST00000568373 RBM15Q96T37 977 aaKnown RBP eCLIP18.97■□□□□ 0.63
SMPD3-211ENST00000568373 RABEP2Q9H5N1 569 aa18.97■□□□□ 0.63
SMPD3-211ENST00000568373 NGRNQ9NPE2 291 aaKnown RBP18.97■□□□□ 0.63
SMPD3-211ENST00000568373 CYLDQ9NQC7 956 aa18.97■□□□□ 0.63
SMPD3-211ENST00000568373 ST3GAL5Q9UNP4 418 aa18.97■□□□□ 0.63
SMPD3-211ENST00000568373 TMEM88BA6NKF7 163 aa18.97■□□□□ 0.63
SMPD3-211ENST00000568373 RPL34P49207 117 aaKnown RBP18.97■□□□□ 0.63
SMPD3-211ENST00000568373 CDR1P51861 262 aa18.97■□□□□ 0.63
SMPD3-211ENST00000568373 IFI35P80217 286 aaPredicted RBP18.97■□□□□ 0.63
SMPD3-211ENST00000568373 DPYSL3Q14195 570 aa18.97■□□□□ 0.63
SMPD3-211ENST00000568373 BOLA3Q53S33 107 aa18.97■□□□□ 0.63
SMPD3-211ENST00000568373 RNASEH2BQ5TBB1 312 aaKnown RBP18.97■□□□□ 0.63
SMPD3-211ENST00000568373 FAM172AQ8WUF8 416 aa18.97■□□□□ 0.63
SMPD3-211ENST00000568373 TNIP3Q96KP6 325 aa18.97■□□□□ 0.63
SMPD3-211ENST00000568373 PECAM1P16284 738 aaPredicted RBP18.96■□□□□ 0.63
SMPD3-211ENST00000568373 DESP17661 470 aa18.96■□□□□ 0.63
SMPD3-211ENST00000568373 WARSP23381 471 aaKnown RBP18.96■□□□□ 0.63
SMPD3-211ENST00000568373 FLT3LGP49771 235 aa18.96■□□□□ 0.63
SMPD3-211ENST00000568373 MMRN1Q13201 1228 aa18.96■□□□□ 0.63
SMPD3-211ENST00000568373 LONRF1Q17RB8 773 aa18.96■□□□□ 0.63
SMPD3-211ENST00000568373 SLC26A9Q7LBE3 791 aa18.96■□□□□ 0.63
SMPD3-211ENST00000568373 SLC2A14Q8TDB8 520 aa18.96■□□□□ 0.63
SMPD3-211ENST00000568373 TEKT4Q8WW24 435 aa18.96■□□□□ 0.63
SMPD3-211ENST00000568373 WNT8BQ93098 351 aa18.96■□□□□ 0.63
SMPD3-211ENST00000568373 SERPINB12Q96P63 405 aa18.96■□□□□ 0.63
SMPD3-211ENST00000568373 NCAPGQ9BPX3 1015 aa18.96■□□□□ 0.63
SMPD3-211ENST00000568373 MAK16Q9BXY0 300 aaKnown RBP18.96■□□□□ 0.63
SMPD3-211ENST00000568373 SENP6Q9GZR1 1112 aaPredicted RBP18.96■□□□□ 0.63
SMPD3-211ENST00000568373 FAM105AQ9NUU6 356 aa18.96■□□□□ 0.63
SMPD3-211ENST00000568373 SHOC2Q9UQ13 582 aa18.96■□□□□ 0.63
SMPD3-211ENST00000568373 MCF2LO15068 1137 aa18.96■□□□□ 0.63
SMPD3-211ENST00000568373 SEPT4O43236 478 aa18.96■□□□□ 0.63
SMPD3-211ENST00000568373 RARBP10826 455 aa18.96■□□□□ 0.63
SMPD3-211ENST00000568373 SCNN1AP37088 669 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms