RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 SLC4A11Q8NBS3 891 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 CCDC150Q8NCX0 1101 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 STKLD1Q8NE28 680 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 PDZD8Q8NEN9 1154 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 FLCNQ8NFG4 579 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 SLC2A14Q8TDB8 520 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 NELL1Q92832 810 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 JAKMIP2Q96AA8 810 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 CHFRQ96EP1 664 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 CYFIP2Q96F07 1278 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 TMEM176AQ96HP8 235 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 CYP2S1Q96SQ9 504 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 SRRTQ9BXP5 876 aaKnown RBP8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 DUSP16Q9BY84 665 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 RNF38Q9H0F5 515 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 SLITRK6Q9H5Y7 841 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 C8orf33Q9H7E9 229 aaPredicted RBP8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 HPS4Q9NQG7 708 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 CISHQ9NSE2 258 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 TRPM5Q9NZQ8 1165 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 MAGED2Q9UNF1 606 aaPredicted RBP8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 CNTN6Q9UQ52 1028 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 SCML2Q9UQR0 700 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 CCL26Q9Y258 94 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 MTF2Q9Y483 593 aaPredicted RBP8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 USP3Q9Y6I4 520 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 TRAV19A0A0A6YYK7 116 aa8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 C2orf78A6NCI8 922 aa8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 FAM170BA6NMN3 283 aa8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 AP1G2O75843 785 aa8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 FGFR1OPO95684 399 aaKnown RBP8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 CHRNB1P11230 501 aa8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 CCDC130P13994 396 aa8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 PRKCSHP14314 528 aaPredicted RBP8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 HDCP19113 662 aa8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 ACO1P21399 889 aaKnown RBP8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 TBXAS1P24557 533 aaPredicted RBP8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 TARSP26639 723 aaKnown RBP8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 ERCC5P28715 1186 aaPredicted RBP8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 HOXD11P31277 338 aaPredicted RBP8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 AVPR1AP37288 418 aa8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 GCNT1Q02742 428 aa8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 EML5Q05BV3 1969 aa8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 KCNH2Q12809 1159 aa8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 CUL2Q13617 745 aa8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 RAB41Q5JT25 222 aa8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 PPP1R26Q5T8A7 1209 aaPredicted RBP8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 TCERG1LQ5VWI1 586 aa8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 KLHL10Q6JEL2 608 aa8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 TPRG1Q6ZUI0 275 aa8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 MAML2Q8IZL2 1156 aaPredicted RBP8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 EHBP1Q8NDI1 1231 aa8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 SCAMP5Q8TAC9 235 aa8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 SLITRK1Q96PX8 696 aa8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 VPS13AQ96RL7 3174 aa8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 ARID3AQ99856 593 aa8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 IER2Q9BTL4 223 aa8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 FOXQ1Q9C009 403 aa8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 DNAI2Q9GZS0 605 aa8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 FBXO44Q9H4M3 255 aa8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 GKN1Q9NS71 199 aa8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 THG1LQ9NWX6 298 aaKnown RBP8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 KIAA1257Q9ULG3 409 aa8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 CTNND2Q9UQB3 1225 aa8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 MRPS17Q9Y2R5 130 aaKnown RBP8.67□□□□□ -1.02
HDGFL3-205ENST00000568129 PIEZO1Q92508 2521 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 GTPBP10A4D1E9 387 aaKnown RBP8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 OTOL1A6NHN0 477 aaPredicted RBP8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 DPYSL4O14531 572 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 TRDMT1O14717 391 aaKnown RBP8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 NCAM2O15394 837 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 PAEPP09466 180 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 FAM200BP0CF97 657 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 TRIM21P19474 475 aaKnown RBP8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 CTHP32929 405 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 NBL1P41271 181 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 KIF11P52732 1056 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 SLC5A3P53794 718 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 RUNX3Q13761 415 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 PDGFRLQ15198 375 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 EML3Q32P44 896 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 ITPRIPL2Q3MIP1 535 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 ZNF528Q3MIS6 628 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 PKDCCQ504Y2 493 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 DCAF17Q5H9S7 520 aaPredicted RBP8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 DPY19L2P1Q6NXN4 242 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 KLHDC10Q6PID8 442 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 CCDC186Q7Z3E2 898 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 C1orf210Q8IVY1 113 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 SCML4Q8N228 414 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 SYNPOQ8N3V7 929 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 ARL14EPQ8N8R7 260 aaPredicted RBP8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 ANKRD52Q8NB46 1076 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 GPT2Q8TD30 523 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 OSCP1Q8WVF1 389 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 FAM3CQ92520 227 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 FAM122AQ96E09 287 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 ZFRQ96KR1 1074 aaKnown RBP8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 SMG9Q9H0W8 520 aaKnown RBP8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 CHRDQ9H2X0 955 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms