RNA–Protein interactions for RNA: ENST00000567279.5

BBS4-213, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 1,876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-213ENST00000567279 SNX1Q13596 522 aa12.31□□□□□ -0.44
BBS4-213ENST00000567279 HLTFQ14527 1009 aaKnown RBP eCLIP12.31□□□□□ -0.44
BBS4-213ENST00000567279 CASP8Q14790 479 aa12.31□□□□□ -0.44
BBS4-213ENST00000567279 ACAP1Q15027 740 aa12.31□□□□□ -0.44
BBS4-213ENST00000567279 TCTN1Q2MV58 587 aa12.31□□□□□ -0.44
BBS4-213ENST00000567279 TRIM60Q495X7 471 aa12.31□□□□□ -0.44
BBS4-213ENST00000567279 KCNT1Q5JUK3 1230 aa12.31□□□□□ -0.44
BBS4-213ENST00000567279 SH3PXD2AQ5TCZ1 1133 aa12.31□□□□□ -0.44
BBS4-213ENST00000567279 CLEC20AQ6ZU45 233 aa12.31□□□□□ -0.44
BBS4-213ENST00000567279 SND1Q7KZF4 910 aaKnown RBP eCLIP12.31□□□□□ -0.44
BBS4-213ENST00000567279 DDX42Q86XP3 938 aaKnown RBP eCLIP12.31□□□□□ -0.44
BBS4-213ENST00000567279 CCDC105Q8IYK2 499 aa12.31□□□□□ -0.44
BBS4-213ENST00000567279 ABI1Q8IZP0 508 aa12.31□□□□□ -0.44
BBS4-213ENST00000567279 SPATA18Q8TC71 538 aa12.31□□□□□ -0.44
BBS4-213ENST00000567279 ATG4AQ8WYN0 398 aa12.31□□□□□ -0.44
BBS4-213ENST00000567279 RAPGEF5Q92565 580 aa12.31□□□□□ -0.44
BBS4-213ENST00000567279 APBB2Q92870 758 aa12.31□□□□□ -0.44
BBS4-213ENST00000567279 MYLPFQ96A32 169 aa12.31□□□□□ -0.44
BBS4-213ENST00000567279 PCED1BQ96HM7 432 aa12.31□□□□□ -0.44
BBS4-213ENST00000567279 CFAP57Q96MR6 1250 aa12.31□□□□□ -0.44
BBS4-213ENST00000567279 RUNDC3BQ96NL0 473 aa12.31□□□□□ -0.44
BBS4-213ENST00000567279 FAM193BQ96PV7 902 aaPredicted RBP12.31□□□□□ -0.44
BBS4-213ENST00000567279 RTP3Q9BQQ7 232 aa12.31□□□□□ -0.44
BBS4-213ENST00000567279 TRIM31Q9BZY9 425 aa12.31□□□□□ -0.44
BBS4-213ENST00000567279 LRFN2Q9ULH4 789 aa12.31□□□□□ -0.44
BBS4-213ENST00000567279 R3HDM2Q9Y2K5 976 aaKnown RBP12.31□□□□□ -0.44
BBS4-213ENST00000567279 PRG3Q9Y2Y8 225 aaPredicted RBP12.31□□□□□ -0.44
BBS4-213ENST00000567279 PCDHB7Q9Y5E2 793 aa12.31□□□□□ -0.44
BBS4-213ENST00000567279 SPDYE4A6NLX3 237 aa12.3□□□□□ -0.44
BBS4-213ENST00000567279 TRUB2O95900 331 aaKnown RBP12.3□□□□□ -0.44
BBS4-213ENST00000567279 COL6A1P12109 1028 aa12.3□□□□□ -0.44
BBS4-213ENST00000567279 KRT10P13645 584 aa12.3□□□□□ -0.44
BBS4-213ENST00000567279 DESP17661 470 aa12.3□□□□□ -0.44
BBS4-213ENST00000567279 PTGIRP43119 386 aa12.3□□□□□ -0.44
BBS4-213ENST00000567279 KCNJ1P48048 391 aa12.3□□□□□ -0.44
BBS4-213ENST00000567279 MNX1P50219 401 aaPredicted RBP12.3□□□□□ -0.44
BBS4-213ENST00000567279 GATMP50440 423 aa12.3□□□□□ -0.44
BBS4-213ENST00000567279 COPS2P61201 443 aa12.3□□□□□ -0.44
BBS4-213ENST00000567279 KLF1Q13351 362 aaPredicted RBP12.3□□□□□ -0.44
BBS4-213ENST00000567279 CUL1Q13616 776 aa12.3□□□□□ -0.44
BBS4-213ENST00000567279 CCDC14Q49A88 953 aa12.3□□□□□ -0.44
BBS4-213ENST00000567279 RAB6CQ53S08 254 aa12.3□□□□□ -0.44
BBS4-213ENST00000567279 OVOS1Q6IE37 1185 aa12.3□□□□□ -0.44
BBS4-213ENST00000567279 SLC26A9Q7LBE3 791 aa12.3□□□□□ -0.44
BBS4-213ENST00000567279 ANKRD33Q7Z3H0 272 aa12.3□□□□□ -0.44
BBS4-213ENST00000567279 COLGALT2Q8IYK4 626 aa12.3□□□□□ -0.44
BBS4-213ENST00000567279 SIX6OS1Q8N1H7 587 aa12.3□□□□□ -0.44
BBS4-213ENST00000567279 MYCBPAPQ8TBZ2 947 aa12.3□□□□□ -0.44
BBS4-213ENST00000567279 HSPH1Q92598 858 aa12.3□□□□□ -0.44
BBS4-213ENST00000567279 KHSRPQ92945 711 aaKnown RBP eCLIP12.3□□□□□ -0.441e-7■■■□□ 16.7
BBS4-213ENST00000567279 PEBP4Q96S96 227 aa12.3□□□□□ -0.44
BBS4-213ENST00000567279 DCLK3Q9C098 648 aa12.3□□□□□ -0.44
BBS4-213ENST00000567279 RAB6CQ9H0N0 254 aa12.3□□□□□ -0.44
BBS4-213ENST00000567279 ELAC1Q9H777 363 aaKnown RBP12.3□□□□□ -0.44
BBS4-213ENST00000567279 LRRC4Q9HBW1 653 aa12.3□□□□□ -0.44
BBS4-213ENST00000567279 NGRNQ9NPE2 291 aaKnown RBP12.3□□□□□ -0.44
BBS4-213ENST00000567279 CHST7Q9NS84 486 aa12.3□□□□□ -0.44
BBS4-213ENST00000567279 KANSL3Q9P2N6 904 aa12.3□□□□□ -0.44
BBS4-213ENST00000567279 DNAJB4Q9UDY4 337 aa12.3□□□□□ -0.44
BBS4-213ENST00000567279 PCYOX1Q9UHG3 505 aa12.3□□□□□ -0.44
BBS4-213ENST00000567279 USP18Q9UMW8 372 aa12.3□□□□□ -0.44
BBS4-213ENST00000567279 hCG_1818297A0A087WSY0 165 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 BHMG1C9JSJ3 638 aaPredicted RBP12.29□□□□□ -0.44
BBS4-213ENST00000567279 DAPK3O43293 454 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 CYP2C18P33260 490 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 PTPN7P35236 360 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 PCK1P35558 622 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 SCNN1AP37088 669 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 RABGGTBP53611 331 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 TLE2Q04725 743 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 INTS6LQ5JSJ4 861 aaKnown RBP12.29□□□□□ -0.44
BBS4-213ENST00000567279 EMBQ6PCB8 327 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 THEM5Q8N1Q8 247 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 DIS3LQ8TF46 1054 aaKnown RBP12.29□□□□□ -0.44
BBS4-213ENST00000567279 FAM172AQ8WUF8 416 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 ZNF333Q96JL9 665 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 FAM118BQ9BPY3 351 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 RHOBTB2Q9BYZ6 727 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 CRISPLD2Q9H0B8 497 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 LRRC19Q9H756 370 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 PCDHB8Q9UN66 801 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 MICAL3Q7RTP6 2002 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 NLRC5Q86WI3 1866 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 MAP2K7O14733 419 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 PRPSAP2O60256 369 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 CAPN15O75808 1086 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 ECEL1O95672 775 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 TYMPP19971 482 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 CDKN2BP42772 138 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 BCAR1P56945 870 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 FAAP100Q0VG06 881 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 TFDP3Q5H9I0 405 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 SCYL2Q6P3W7 929 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 CTU1Q7Z7A3 348 aaKnown RBP12.29□□□□□ -0.44
BBS4-213ENST00000567279 DEFB128Q7Z7B8 93 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 OR10T2Q8NGX3 314 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 KCTD13Q8WZ19 329 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 FAM149B1Q96BN6 582 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 SMARCD1Q96GM5 515 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 CCDC114Q96M63 670 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms