RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 CCDC130P13994 396 aa27.43■■□□□ 1.98
NME3-208ENST00000565379 FERP16591 822 aa27.43■■□□□ 1.98
NME3-208ENST00000565379 CYP2F1P24903 491 aa27.43■■□□□ 1.98
NME3-208ENST00000565379 CLCN1P35523 988 aa27.43■■□□□ 1.98
NME3-208ENST00000565379 ZBED6P86452 979 aa27.43■■□□□ 1.98
NME3-208ENST00000565379 ASTLQ6HA08 431 aaPredicted RBP27.43■■□□□ 1.98
NME3-208ENST00000565379 LCLAT1Q6UWP7 414 aa27.43■■□□□ 1.98
NME3-208ENST00000565379 PAQR9Q6ZVX9 377 aa27.43■■□□□ 1.98
NME3-208ENST00000565379 SIX5Q8N196 739 aa27.43■■□□□ 1.98
NME3-208ENST00000565379 ANKRD52Q8NB46 1076 aa27.43■■□□□ 1.98
NME3-208ENST00000565379 FLCNQ8NFG4 579 aa27.43■■□□□ 1.98
NME3-208ENST00000565379 C8orf48Q96LL4 319 aa27.43■■□□□ 1.98
NME3-208ENST00000565379 LPIN3Q9BQK8 851 aa27.43■■□□□ 1.98
NME3-208ENST00000565379 ZNF518BQ9C0D4 1074 aa27.43■■□□□ 1.98
NME3-208ENST00000565379 MFSD1Q9H3U5 465 aa27.43■■□□□ 1.98
NME3-208ENST00000565379 SLC27A5Q9Y2P5 690 aa27.43■■□□□ 1.98
NME3-208ENST00000565379 YIPF1Q9Y548 306 aa27.43■■□□□ 1.98
NME3-208ENST00000565379 ASB3Q9Y575 518 aa27.43■■□□□ 1.98
NME3-208ENST00000565379 O00370 1275 aa27.42■■□□□ 1.98
NME3-208ENST00000565379 PI15O43692 258 aa27.42■■□□□ 1.98
NME3-208ENST00000565379 ANXA13P27216 316 aa27.42■■□□□ 1.98
NME3-208ENST00000565379 GRIK1P39086 918 aa27.42■■□□□ 1.98
NME3-208ENST00000565379 PDE6CP51160 858 aa27.42■■□□□ 1.98
NME3-208ENST00000565379 CLCN5P51795 746 aa27.42■■□□□ 1.98
NME3-208ENST00000565379 CDR1P51861 262 aa27.42■■□□□ 1.98
NME3-208ENST00000565379 EPHB3P54753 998 aa27.42■■□□□ 1.98
NME3-208ENST00000565379 VEPH1Q14D04 833 aa27.42■■□□□ 1.98
NME3-208ENST00000565379 CCDC142Q17RM4 750 aa27.42■■□□□ 1.98
NME3-208ENST00000565379 PABPC1LQ4VXU2 614 aaKnown RBP27.42■■□□□ 1.98
NME3-208ENST00000565379 ZNF677Q86XU0 584 aa27.42■■□□□ 1.98
NME3-208ENST00000565379 NPAS3Q8IXF0 933 aa27.42■■□□□ 1.98
NME3-208ENST00000565379 ELMOD1Q8N336 334 aa27.42■■□□□ 1.98
NME3-208ENST00000565379 ZNF606Q8WXB4 792 aa27.42■■□□□ 1.98
NME3-208ENST00000565379 SYN2Q92777 582 aaPredicted RBP27.42■■□□□ 1.98
NME3-208ENST00000565379 CRISPLD1Q9H336 500 aa27.42■■□□□ 1.98
NME3-208ENST00000565379 GRPEL1Q9HAV7 217 aa27.42■■□□□ 1.98
NME3-208ENST00000565379 CSNK1G1Q9HCP0 422 aa27.42■■□□□ 1.98
NME3-208ENST00000565379 DMAP1Q9NPF5 467 aaPredicted RBP27.42■■□□□ 1.98
NME3-208ENST00000565379 FBXL21Q9UKT6 434 aa27.42■■□□□ 1.98
NME3-208ENST00000565379 WDR3Q9UNX4 943 aaKnown RBP eCLIP27.42■■□□□ 1.98
NME3-208ENST00000565379 COL4A3Q01955 1670 aa27.42■■□□□ 1.98
NME3-208ENST00000565379 KRBA1A5PL33 1030 aa27.41■■□□□ 1.98
NME3-208ENST00000565379 THAP12O43422 761 aa27.41■■□□□ 1.98
NME3-208ENST00000565379 GFRA3O60609 400 aa27.41■■□□□ 1.98
NME3-208ENST00000565379 AP1G2O75843 785 aa27.41■■□□□ 1.98
NME3-208ENST00000565379 GFPT2O94808 682 aa27.41■■□□□ 1.98
NME3-208ENST00000565379 GYPCP04921 128 aa27.41■■□□□ 1.98
NME3-208ENST00000565379 RHOP08100 348 aa27.41■■□□□ 1.98
NME3-208ENST00000565379 ADORA2BP29275 332 aa27.41■■□□□ 1.98
NME3-208ENST00000565379 CDC25BP30305 580 aa27.41■■□□□ 1.98
NME3-208ENST00000565379 SFMBT2Q5VUG0 894 aa27.41■■□□□ 1.98
NME3-208ENST00000565379 ITIH5Q86UX2 942 aa27.41■■□□□ 1.98
NME3-208ENST00000565379 TFAP2BQ92481 460 aa27.41■■□□□ 1.98
NME3-208ENST00000565379 TCEAL4Q96EI5 215 aa27.41■■□□□ 1.98
NME3-208ENST00000565379 SPATA17Q96L03 361 aa27.41■■□□□ 1.98
NME3-208ENST00000565379 DUSP16Q9BY84 665 aa27.41■■□□□ 1.98
NME3-208ENST00000565379 UBXN6Q9BZV1 441 aa27.41■■□□□ 1.98
NME3-208ENST00000565379 PNPLA8Q9NP80 782 aa27.41■■□□□ 1.98
NME3-208ENST00000565379 KRT82Q9NSB4 513 aa27.41■■□□□ 1.98
NME3-208ENST00000565379 EHD2Q9NZN4 543 aa27.41■■□□□ 1.98
NME3-208ENST00000565379 AIPL1Q9NZN9 384 aa27.41■■□□□ 1.98
NME3-208ENST00000565379 TSPAN16Q9UKR8 245 aa27.41■■□□□ 1.98
NME3-208ENST00000565379 CA14Q9ULX7 337 aa27.41■■□□□ 1.98
NME3-208ENST00000565379 LRRC53A6NM62 1247 aa27.4■■□□□ 1.98
NME3-208ENST00000565379 CLDN5O00501 218 aa27.4■■□□□ 1.98
NME3-208ENST00000565379 CYP11B1P15538 503 aa27.4■■□□□ 1.98
NME3-208ENST00000565379 CEBPBP17676 345 aa27.4■■□□□ 1.98
NME3-208ENST00000565379 BRD2P25440 801 aaKnown RBP27.4■■□□□ 1.98
NME3-208ENST00000565379 BCAT1P54687 386 aa27.4■■□□□ 1.98
NME3-208ENST00000565379 TWF1Q12792 350 aa27.4■■□□□ 1.98
NME3-208ENST00000565379 SLC47A2Q86VL8 602 aa27.4■■□□□ 1.98
NME3-208ENST00000565379 GPR152Q8TDT2 470 aa27.4■■□□□ 1.98
NME3-208ENST00000565379 PCDHGC3Q9UN70 934 aa27.4■■□□□ 1.98
NME3-208ENST00000565379 PROB1E7EW31 1015 aa27.39■■□□□ 1.98
NME3-208ENST00000565379 PNMA6AP0CW24 399 aaPredicted RBP27.39■■□□□ 1.98
NME3-208ENST00000565379 SETSIPP0DME0 302 aa27.39■■□□□ 1.98
NME3-208ENST00000565379 KRT9P35527 623 aa27.39■■□□□ 1.98
NME3-208ENST00000565379 BST2Q10589 180 aaKnown RBP27.39■■□□□ 1.98
NME3-208ENST00000565379 GOLGA7BQ2TAP0 167 aa27.39■■□□□ 1.98
NME3-208ENST00000565379 TMC6Q7Z403 805 aa27.39■■□□□ 1.98
NME3-208ENST00000565379 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.39■■□□□ 1.98
NME3-208ENST00000565379 SCN4BQ8IWT1 228 aa27.39■■□□□ 1.98
NME3-208ENST00000565379 HS6ST3Q8IZP7 471 aa27.39■■□□□ 1.98
NME3-208ENST00000565379 TTC9BQ8N6N2 239 aa27.39■■□□□ 1.98
NME3-208ENST00000565379 KXD1Q9BQD3 176 aa27.39■■□□□ 1.98
NME3-208ENST00000565379 MRPS23Q9Y3D9 190 aaKnown RBP27.39■■□□□ 1.98
NME3-208ENST00000565379 ADCY5O95622 1261 aa27.38■■□□□ 1.97
NME3-208ENST00000565379 SRFP11831 508 aa27.38■■□□□ 1.97
NME3-208ENST00000565379 CASP14P31944 242 aa27.38■■□□□ 1.97
NME3-208ENST00000565379 CCR2P41597 374 aa27.38■■□□□ 1.97
NME3-208ENST00000565379 ASIC2Q16515 512 aa27.38■■□□□ 1.97
NME3-208ENST00000565379 CLEC20AQ6ZU45 233 aa27.38■■□□□ 1.97
NME3-208ENST00000565379 CPLX3Q8WVH0 158 aa27.38■■□□□ 1.97
NME3-208ENST00000565379 MCRS1Q96EZ8 462 aa27.38■■□□□ 1.97
NME3-208ENST00000565379 ZNF512Q96ME7 567 aaPredicted RBP27.38■■□□□ 1.97
NME3-208ENST00000565379 CORO1BQ9BR76 489 aa27.38■■□□□ 1.97
NME3-208ENST00000565379 COMMD8Q9NX08 183 aa27.38■■□□□ 1.97
NME3-208ENST00000565379 CEP83Q9Y592 693 aa27.38■■□□□ 1.97
NME3-208ENST00000565379 BZW2Q9Y6E2 419 aaKnown RBP27.38■■□□□ 1.97
NME3-208ENST00000565379 F8VP50 259 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms