RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 KIAA1586Q9HCI6 787 aa6.54□□□□□ -1.36
PTPN9-204ENST00000564970 ANKHQ9HCJ1 492 aa6.54□□□□□ -1.36
PTPN9-204ENST00000564970 S100A14Q9HCY8 104 aa6.54□□□□□ -1.36
PTPN9-204ENST00000564970 CASS4Q9NQ75 786 aa6.54□□□□□ -1.36
PTPN9-204ENST00000564970 ZC4H2Q9NQZ6 224 aa6.54□□□□□ -1.36
PTPN9-204ENST00000564970 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.54□□□□□ -1.36
PTPN9-204ENST00000564970 RIC8BQ9NVN3 520 aa6.54□□□□□ -1.36
PTPN9-204ENST00000564970 KBTBD4Q9NVX7 518 aa6.54□□□□□ -1.36
PTPN9-204ENST00000564970 MOSPD1Q9UJG1 213 aa6.54□□□□□ -1.36
PTPN9-204ENST00000564970 RIMKLBQ9ULI2 386 aa6.54□□□□□ -1.36
PTPN9-204ENST00000564970 TRIM33Q9UPN9 1127 aa6.54□□□□□ -1.36
PTPN9-204ENST00000564970 DOLKQ9UPQ8 538 aa6.54□□□□□ -1.36
PTPN9-204ENST00000564970 SPG7Q9UQ90 795 aa6.54□□□□□ -1.36
PTPN9-204ENST00000564970 CLEC11AQ9Y240 323 aa6.54□□□□□ -1.36
PTPN9-204ENST00000564970 EIF3LQ9Y262 564 aaKnown RBP6.54□□□□□ -1.36
PTPN9-204ENST00000564970 PCDHB12Q9Y5F1 795 aa6.54□□□□□ -1.36
PTPN9-204ENST00000564970 PIK3C2AO00443 1686 aa6.54□□□□□ -1.36
PTPN9-204ENST00000564970 MYH8P13535 1937 aa6.54□□□□□ -1.36
PTPN9-204ENST00000564970 C1orf167Q5SNV9 1468 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 MROH2AA6NES4 1674 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 FAM47DPA6NHR8 397 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 TSPY2A6NKD2 308 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 BTN3A1O00481 513 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 BACH1O14867 736 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 AXIN1O15169 862 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 PRPF4O43172 522 aaKnown RBP eCLIP6.53□□□□□ -1.36
PTPN9-204ENST00000564970 EDF1O60869 148 aaKnown RBP6.53□□□□□ -1.36
PTPN9-204ENST00000564970 RNGTTO60942 597 aaKnown RBP6.53□□□□□ -1.36
PTPN9-204ENST00000564970 CDH16O75309 829 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 GCATO75600 419 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 MYO1DO94832 1006 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 TTLL1O95922 423 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 TSPY3P0CV98 308 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 TSPY8P0CW00 308 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 TRAPPC2P0DI81 140 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 TRAPPC2BP0DI82 140 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 THRAP10827 490 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 BMP1P13497 986 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 KRT13P13646 458 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 MYL6BP14649 208 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 ITGA2P17301 1181 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 TAC1P20366 129 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 F8A1P23610 371 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 IL12AP29459 219 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 NMT1P30419 496 aaKnown RBP6.53□□□□□ -1.36
PTPN9-204ENST00000564970 SERPINB1P30740 379 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 RAP1GAPP47736 663 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 CLK3P49761 638 aaKnown RBP6.53□□□□□ -1.36
PTPN9-204ENST00000564970 ZNF135P52742 658 aaPredicted RBP6.53□□□□□ -1.36
PTPN9-204ENST00000564970 PLTPP55058 493 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 NCKAP1LP55160 1127 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 SNX16P57768 344 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 TSPY1Q01534 308 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 MGAT5Q09328 741 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 NFIAQ12857 509 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 SNAPC2Q13487 334 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 AUHQ13825 339 aaKnown RBP6.53□□□□□ -1.36
PTPN9-204ENST00000564970 RAPGEF1Q13905 1077 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 DSC3Q14574 896 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 HERC3Q15034 1050 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 GRIK5Q16478 980 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 PDK4Q16654 411 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 AASDHQ4L235 1098 aaPredicted RBP6.53□□□□□ -1.36
PTPN9-204ENST00000564970 DCAF6Q58WW2 860 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 SLC10A5Q5PT55 438 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 ARMC4Q5T2S8 1044 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 BARGINQ6ZT62 677 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 USP51Q70EK9 711 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 CYFIP1Q7L576 1253 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 SH3RF1Q7Z6J0 888 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 HORMAD1Q86X24 394 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 FBXO11Q86XK2 927 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 RIOX2Q8IUF8 465 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 SPATA2LQ8IUW3 424 aaPredicted RBP6.53□□□□□ -1.36
PTPN9-204ENST00000564970 FOXP4Q8IVH2 680 aaPredicted RBP6.53□□□□□ -1.36
PTPN9-204ENST00000564970 ANKLE1Q8NAG6 615 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 TSPAN14Q8NG11 270 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 TPCN2Q8NHX9 752 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 FANK1Q8TC84 345 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 PNPT1Q8TCS8 783 aaKnown RBP6.53□□□□□ -1.36
PTPN9-204ENST00000564970 MCOLN3Q8TDD5 553 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.53□□□□□ -1.36
PTPN9-204ENST00000564970 EPS8L1Q8TE68 723 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 RSAD2Q8WXG1 361 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 SLC9A6Q92581 669 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 HPS1Q92902 700 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 PDXPQ96GD0 296 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 FAM20AQ96MK3 541 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 TSNARE1Q96NA8 513 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 ISCA1Q9BUE6 129 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 YTHDF1Q9BYJ9 559 aaKnown RBP6.53□□□□□ -1.36
PTPN9-204ENST00000564970 IL25Q9H293 177 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 ADNPQ9H2P0 1102 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 TUT1Q9H6E5 874 aaKnown RBP6.53□□□□□ -1.36
PTPN9-204ENST00000564970 ACAD9Q9H845 621 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 TRIM39Q9HCM9 518 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 FBXO28Q9NVF7 368 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 DNAJC17Q9NVM6 304 aaKnown RBP6.53□□□□□ -1.36
PTPN9-204ENST00000564970 PAQR5Q9NXK6 330 aaPredicted RBP6.53□□□□□ -1.36
PTPN9-204ENST00000564970 ANKFY1Q9P2R3 1169 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms