RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 OSTNP61366 133 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 RPL7AP62424 266 aaKnown RBP7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 PPP2R2AP63151 447 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 ACVR2BQ13705 512 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 SLC29A2Q14542 456 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 STILQ15468 1287 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 CNGA2Q16280 664 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 SLC10A6Q3KNW5 377 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 ODF2Q5BJF6 829 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 DNAJC21Q5F1R6 531 aaKnown RBP7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 JADE1Q6IE81 842 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 LLGL2Q6P1M3 1020 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 RHBDF2Q6PJF5 856 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 BRICD5Q6PL45 260 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 NXPE4Q6UWF7 544 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 PLEKHH3Q7Z736 793 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 PHLDB2Q86SQ0 1253 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 RELL1Q8IUW5 271 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 OR2W6PQ8NHA6 318 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 SVIPQ8NHG7 77 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 BRI3BPQ8WY22 251 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 TFAP2BQ92481 460 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 TLCD1Q96CP7 247 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 MAML3Q96JK9 1138 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 ACAP3Q96P50 834 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 PARK7Q99497 189 aaKnown RBP7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 SMAD5Q99717 465 aaKnown RBP7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 STMN4Q9H169 189 aaPredicted RBP7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 EPN3Q9H201 632 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 CHST7Q9NS84 486 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 NXF1Q9UBU9 619 aaKnown RBP7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 ASIC3Q9UHC3 531 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 DERAQ9Y315 318 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 MRPS23Q9Y3D9 190 aaKnown RBP7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 NEU2Q9Y3R4 380 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 SLC15A5A6NIM6 579 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 RIPK2O43353 540 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 CILPO75339 1184 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 HMGCRP04035 888 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 ITGB3P05106 788 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 NFICP08651 508 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 LSP1P33241 339 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 RBP5P82980 135 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 NFKB2Q00653 900 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 PTPN11Q06124 597 aaPredicted RBP7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 TMEM132DQ14C87 1099 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 HADHQ16836 314 aaKnown RBP7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 DCAF4L1Q3SXM0 396 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 FBXL19Q6PCT2 694 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 ZNF365Q70YC5 407 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 SPATS2Q86XZ4 545 aaKnown RBP7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 TMEM192Q8IY95 271 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 KIAA0319LQ8IZA0 1049 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 SLC4A11Q8NBS3 891 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 ZNF296Q8WUU4 475 aaPredicted RBP7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 PPM1EQ8WY54 764 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 E2F7Q96AV8 911 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 CENPTQ96BT3 561 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 TMEM176AQ96HP8 235 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 SCLT1Q96NL6 688 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 MCEEQ96PE7 176 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 FRMD8P1Q9BZ68 369 aaPredicted RBP7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 FAM107BQ9H098 131 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 CENPHQ9H3R5 247 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 SEMA4AQ9H3S1 761 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 FAM8A1Q9UBU6 413 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 SLC12A6Q9UHW9 1150 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 MGAMO43451 1857 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 EBAG9O00559 213 aa7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 TP73O15350 636 aa7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 TSPAN1O60635 241 aa7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 AGTP01019 485 aa7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 MMP3P08254 477 aa7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 KRT7P08729 469 aa7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 KRT3P12035 628 aa7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 ATF2P15336 505 aa7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 CD19P15391 556 aa7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 SMPD1P17405 629 aa7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 GRM5P41594 1212 aa7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 SSR1P43307 286 aaKnown RBP7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 INCA1Q0VD86 236 aa7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 PDCLQ13371 301 aa7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 SNX1Q13596 522 aa7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 TCEA2Q15560 299 aa7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 GRIK4Q16099 956 aa7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 TFDP3Q5H9I0 405 aa7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 MARCH8Q5T0T0 291 aa7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 GJC2Q5T442 439 aaPredicted RBP7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 SPRYD7Q5W111 196 aa7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 ERAP2Q6P179 960 aa7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 SCARA5Q6ZMJ2 495 aa7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 B4GALNT4Q76KP1 1039 aa7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 CDR2LQ86X02 465 aaPredicted RBP7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 PAF1Q8N7H5 531 aa7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 C2orf69Q8N8R5 385 aa7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 ZNF668Q96K58 619 aaPredicted RBP7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 SLITRK1Q96PX8 696 aa7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 TSPAN18Q96SJ8 248 aa7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 HEMGNQ9BXL5 484 aa7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 GBA2Q9HCG7 927 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms