RNA–Protein interactions for RNA: ENST00000564662.1

COTL1-204, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 2

Gene COTL1, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-204ENST00000564662 ZNF516Q92618 1163 aa21.36■■□□□ 1.01
COTL1-204ENST00000564662 ZC3H10Q96K80 434 aaKnown RBP21.36■■□□□ 1.01
COTL1-204ENST00000564662 SLITRK1Q96PX8 696 aa21.36■■□□□ 1.01
COTL1-204ENST00000564662 TPSD1Q9BZJ3 242 aa21.36■■□□□ 1.01
COTL1-204ENST00000564662 RNF38Q9H0F5 515 aa21.36■■□□□ 1.01
COTL1-204ENST00000564662 GZF1Q9H116 711 aaPredicted RBP21.36■■□□□ 1.01
COTL1-204ENST00000564662 DUSP15Q9H1R2 295 aaPredicted RBP21.36■■□□□ 1.01
COTL1-204ENST00000564662 PCDHGA5Q9Y5G8 931 aa21.36■■□□□ 1.01
COTL1-204ENST00000564662 ANTXRLA6NF34 631 aa21.35■■□□□ 1.01
COTL1-204ENST00000564662 PHACTR2O75167 634 aa21.35■■□□□ 1.01
COTL1-204ENST00000564662 OLFM2O95897 454 aa21.35■■□□□ 1.01
COTL1-204ENST00000564662 OAS1P00973 400 aaKnown RBP21.35■■□□□ 1.01
COTL1-204ENST00000564662 GBP1P32455 592 aa21.35■■□□□ 1.01
COTL1-204ENST00000564662 AFMP43652 599 aa21.35■■□□□ 1.01
COTL1-204ENST00000564662 PPP3CCP48454 512 aa21.35■■□□□ 1.01
COTL1-204ENST00000564662 CASP4P49662 377 aa21.35■■□□□ 1.01
COTL1-204ENST00000564662 LIMK1P53667 647 aa21.35■■□□□ 1.01
COTL1-204ENST00000564662 SNRPFP62306 86 aaKnown RBP21.35■■□□□ 1.01
COTL1-204ENST00000564662 SLC7A9P82251 487 aa21.35■■□□□ 1.01
COTL1-204ENST00000564662 BIRC3Q13489 604 aa21.35■■□□□ 1.01
COTL1-204ENST00000564662 GAB4Q2WGN9 574 aa21.35■■□□□ 1.01
COTL1-204ENST00000564662 C2orf27AQ580R0 203 aa21.35■■□□□ 1.01
COTL1-204ENST00000564662 PLA2G2CQ5R387 149 aa21.35■■□□□ 1.01
COTL1-204ENST00000564662 TDRD10Q5VZ19 366 aaKnown RBP21.35■■□□□ 1.01
COTL1-204ENST00000564662 TCEAL6Q6IPX3 200 aa21.35■■□□□ 1.01
COTL1-204ENST00000564662 SCARA5Q6ZMJ2 495 aa21.35■■□□□ 1.01
COTL1-204ENST00000564662 USP33Q8TEY7 942 aa21.35■■□□□ 1.01
COTL1-204ENST00000564662 DDX1Q92499 740 aaKnown RBP21.35■■□□□ 1.01
COTL1-204ENST00000564662 TCEAL3Q969E4 200 aa21.35■■□□□ 1.01
COTL1-204ENST00000564662 SYAP1Q96A49 352 aaPredicted RBP21.35■■□□□ 1.01
COTL1-204ENST00000564662 BACH2Q9BYV9 841 aa21.35■■□□□ 1.01
COTL1-204ENST00000564662 XYLT2Q9H1B5 865 aa21.35■■□□□ 1.01
COTL1-204ENST00000564662 SMYD3Q9H7B4 428 aa21.35■■□□□ 1.01
COTL1-204ENST00000564662 CFAP97Q9P2B7 532 aa21.35■■□□□ 1.01
COTL1-204ENST00000564662 EXOC3O60645 756 aa21.34■■□□□ 1.01
COTL1-204ENST00000564662 STAU1O95793 577 aaKnown RBP21.34■■□□□ 1.01
COTL1-204ENST00000564662 MBL2P11226 248 aaPredicted RBP21.34■■□□□ 1.01
COTL1-204ENST00000564662 CUL4BQ13620 913 aa21.34■■□□□ 1.01
COTL1-204ENST00000564662 BMT2Q1RMZ1 405 aa21.34■■□□□ 1.01
COTL1-204ENST00000564662 GRAMD1CQ8IYS0 662 aa21.34■■□□□ 1.01
COTL1-204ENST00000564662 CCDC26Q8TAB7 109 aa21.34■■□□□ 1.01
COTL1-204ENST00000564662 B3GNT5Q9BYG0 378 aa21.34■■□□□ 1.01
COTL1-204ENST00000564662 FAM13BQ9NYF5 915 aa21.34■■□□□ 1.01
COTL1-204ENST00000564662 EBF1Q9UH73 591 aa21.34■■□□□ 1.01
COTL1-204ENST00000564662 INVSQ9Y283 1065 aa21.34■■□□□ 1.01
COTL1-204ENST00000564662 ATP8B3O60423 1300 aa21.33■■□□□ 1.01
COTL1-204ENST00000564662 K7EQS6 105 aa21.33■■□□□ 1.01
COTL1-204ENST00000564662 ATICP31939 592 aa21.33■■□□□ 1.01
COTL1-204ENST00000564662 ME1P48163 572 aa21.33■■□□□ 1.01
COTL1-204ENST00000564662 CREB5Q02930 508 aa21.33■■□□□ 1.01
COTL1-204ENST00000564662 ZNF699Q32M78 642 aa21.33■■□□□ 1.01
COTL1-204ENST00000564662 STPG1Q5TH74 334 aa21.33■■□□□ 1.01
COTL1-204ENST00000564662 ANO7Q6IWH7 933 aa21.33■■□□□ 1.01
COTL1-204ENST00000564662 FAM35AQ86V20 835 aa21.33■■□□□ 1.01
COTL1-204ENST00000564662 TTC30AQ86WT1 665 aa21.33■■□□□ 1.01
COTL1-204ENST00000564662 C12orf56Q8IXR9 622 aa21.33■■□□□ 1.01
COTL1-204ENST00000564662 CCDC33Q8N5R6 958 aa21.33■■□□□ 1.01
COTL1-204ENST00000564662 PLEKHO2Q8TD55 490 aa21.33■■□□□ 1.01
COTL1-204ENST00000564662 FBXO32Q969P5 355 aa21.33■■□□□ 1.01
COTL1-204ENST00000564662 ELMO3Q96BJ8 720 aa21.33■■□□□ 1.01
COTL1-204ENST00000564662 MED10Q9BTT4 135 aa21.33■■□□□ 1.01
COTL1-204ENST00000564662 VPS45Q9NRW7 570 aa21.33■■□□□ 1.01
COTL1-204ENST00000564662 CGNQ9P2M7 1197 aaKnown RBP21.33■■□□□ 1.01
COTL1-204ENST00000564662 TNRC6BQ9UPQ9 1833 aaKnown RBP21.33■■□□□ 1.01
COTL1-204ENST00000564662 PLXND1Q9Y4D7 1925 aa21.32■■□□□ 1
COTL1-204ENST00000564662 RHOBTB1O94844 696 aa21.32■■□□□ 1
COTL1-204ENST00000564662 F13A1P00488 732 aa21.32■■□□□ 1
COTL1-204ENST00000564662 FAM163BP0C2L3 166 aa21.32■■□□□ 1
COTL1-204ENST00000564662 ZSCAN22P10073 491 aaPredicted RBP21.32■■□□□ 1
COTL1-204ENST00000564662 DHCR24Q15392 516 aa21.32■■□□□ 1
COTL1-204ENST00000564662 KNOP1Q1ED39 458 aaKnown RBP21.32■■□□□ 1
COTL1-204ENST00000564662 SFTPA1Q8IWL2 248 aa21.32■■□□□ 1
COTL1-204ENST00000564662 NUP93Q8N1F7 819 aa21.32■■□□□ 1
COTL1-204ENST00000564662 MMP17Q9ULZ9 603 aa21.32■■□□□ 1
COTL1-204ENST00000564662 PCDHA7Q9UN72 937 aa21.32■■□□□ 1
COTL1-204ENST00000564662 PVALEFA0A1B0GWK0 134 aa21.31■■□□□ 1
COTL1-204ENST00000564662 LRRIQ3A6PVS8 624 aaPredicted RBP21.31■■□□□ 1
COTL1-204ENST00000564662 SLC9A3R1O14745 358 aaPredicted RBP21.31■■□□□ 1
COTL1-204ENST00000564662 RTN3O95197 1032 aaPredicted RBP21.31■■□□□ 1
COTL1-204ENST00000564662 HSP90AA1P07900 732 aaKnown RBP21.31■■□□□ 1
COTL1-204ENST00000564662 YWHAQP27348 245 aa21.31■■□□□ 1
COTL1-204ENST00000564662 CDH8P55286 799 aa21.31■■□□□ 1
COTL1-204ENST00000564662 KDSRQ06136 332 aa21.31■■□□□ 1
COTL1-204ENST00000564662 MESP2Q0VG99 397 aa21.31■■□□□ 1
COTL1-204ENST00000564662 ZNF667Q5HYK9 610 aa21.31■■□□□ 1
COTL1-204ENST00000564662 RESP18Q5W5W9 173 aa21.31■■□□□ 1
COTL1-204ENST00000564662 C12orf40Q86WS4 652 aa21.31■■□□□ 1
COTL1-204ENST00000564662 DDX42Q86XP3 938 aaKnown RBP eCLIP21.31■■□□□ 1
COTL1-204ENST00000564662 CEP57L1Q8IYX8 460 aa21.31■■□□□ 1
COTL1-204ENST00000564662 PDZD8Q8NEN9 1154 aa21.31■■□□□ 1
COTL1-204ENST00000564662 KCNK16Q96T55 309 aa21.31■■□□□ 1
COTL1-204ENST00000564662 EDEM2Q9BV94 578 aa21.31■■□□□ 1
COTL1-204ENST00000564662 ADH1CP00326 375 aa21.3■■□□□ 1
COTL1-204ENST00000564662 ADH5P11766 374 aa21.3■■□□□ 1
COTL1-204ENST00000564662 SLC6A11P48066 632 aa21.3■■□□□ 1
COTL1-204ENST00000564662 NCOA4Q13772 614 aa21.3■■□□□ 1
COTL1-204ENST00000564662 PMS2CLQ68D20 193 aa21.3■■□□□ 1
COTL1-204ENST00000564662 RNF43Q68DV7 783 aa21.3■■□□□ 1
COTL1-204ENST00000564662 ADGRG2Q8IZP9 1017 aa21.3■■□□□ 1
COTL1-204ENST00000564662 ABCA7Q8IZY2 2146 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms