RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 FAM183BPQ6ZVS7 135 aa13.49□□□□□ -0.25
CLK3-214ENST00000564096 XYLT1Q86Y38 959 aa13.49□□□□□ -0.25
CLK3-214ENST00000564096 DNAAF5Q86Y56 855 aa13.49□□□□□ -0.25
CLK3-214ENST00000564096 ATAD1Q8NBU5 361 aa13.49□□□□□ -0.25
CLK3-214ENST00000564096 ZNF461Q8TAF7 563 aa13.49□□□□□ -0.25
CLK3-214ENST00000564096 SLC35G2Q8TBE7 412 aa13.49□□□□□ -0.25
CLK3-214ENST00000564096 MICAL1Q8TDZ2 1067 aa13.49□□□□□ -0.25
CLK3-214ENST00000564096 CLSTN3Q9BQT9 956 aa13.49□□□□□ -0.25
CLK3-214ENST00000564096 RHOBTB2Q9BYZ6 727 aa13.49□□□□□ -0.25
CLK3-214ENST00000564096 ALG13Q9NP73 1137 aaKnown RBP13.49□□□□□ -0.25
CLK3-214ENST00000564096 CNGB3Q9NQW8 809 aa13.49□□□□□ -0.25
CLK3-214ENST00000564096 TRIM10Q9UDY6 481 aa13.49□□□□□ -0.25
CLK3-214ENST00000564096 ANAPC7Q9UJX3 599 aa13.49□□□□□ -0.25
CLK3-214ENST00000564096 TFR2Q9UP52 801 aa13.49□□□□□ -0.25
CLK3-214ENST00000564096 A0A1W2PPC1 479 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 H3BNC9 293 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 TULP2O00295 520 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 PRRG1O14668 218 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 BUB1O43683 1085 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 HSF2BPO75031 334 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 RTN3O95197 1032 aaPredicted RBP13.48□□□□□ -0.25
CLK3-214ENST00000564096 MOCS3O95396 460 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 CXCL14O95715 111 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 HAPLN1P10915 354 aaPredicted RBP13.48□□□□□ -0.25
CLK3-214ENST00000564096 KRT3P12035 628 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 ATF2P15336 505 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 PBX2P40425 430 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 SLC5A3P53794 718 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 GNG11P61952 73 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 MAMLD1Q13495 774 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 C2CD6Q53TS8 623 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 RAB41Q5JT25 222 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 OLFML1Q6UWY5 402 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 RSPO2Q6UXX9 243 aaPredicted RBP13.48□□□□□ -0.25
CLK3-214ENST00000564096 CCDC149Q6ZUS6 474 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 NYAP1Q6ZVC0 841 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 SCML4Q8N228 414 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 ZMIZ2Q8NF64 920 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 SPPL3Q8TCT6 385 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 AUTS2Q8WXX7 1259 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 IRGQQ8WZA9 623 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 PPP2R3CQ969Q6 453 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 TIFAQ96CG3 184 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 MCRS1Q96EZ8 462 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 MCEEQ96PE7 176 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 FBXO44Q9H4M3 255 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 CYP4F11Q9HBI6 524 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 METTL5Q9NRN9 209 aaKnown RBP13.48□□□□□ -0.25
CLK3-214ENST00000564096 ASNSD1Q9NWL6 643 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 DPP7Q9UHL4 492 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 PCDHGC5Q9Y5F6 944 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 NLRC5Q86WI3 1866 aa13.48□□□□□ -0.25
CLK3-214ENST00000564096 A0A0U1RQJ8 604 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 MYO1FO00160 1098 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 FSCN2O14926 492 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 ADAM12O43184 909 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 PAPSS1O43252 624 aaPredicted RBP13.47□□□□□ -0.25
CLK3-214ENST00000564096 LILRB3O75022 631 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 BEST1O76090 585 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 ABLIM3O94929 683 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 ARHGEF15O94989 841 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 CSPG5O95196 566 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 ZBED1O96006 694 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 GLUD1P00367 558 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 C1RP00736 705 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 GLI1P08151 1106 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 CNPP09543 421 aaKnown RBP13.47□□□□□ -0.25
CLK3-214ENST00000564096 KLRC2P26717 231 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 ALDH1A3P47895 512 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 CACNA2D1P54289 1103 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 SLC6A3Q01959 620 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 DUSP4Q13115 394 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 PTPROQ16827 1216 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 EFHC1Q5JVL4 640 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 DENND5BQ6ZUT9 1274 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 SLC26A9Q7LBE3 791 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 DAAM2Q86T65 1068 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 NUP93Q8N1F7 819 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 ARHGAP18Q8N392 663 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.47□□□□□ -0.25
CLK3-214ENST00000564096 FEZF2Q8TBJ5 459 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 FNIP1Q8TF40 1166 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 UBE2Q2Q8WVN8 375 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 ATRIPQ8WXE1 791 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 ARNTL2Q8WYA1 636 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 FAM149B1Q96BN6 582 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 SPATA17Q96L03 361 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 KCNK16Q96T55 309 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 OSGEPQ9NPF4 335 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 COMMD8Q9NX08 183 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 IP6K2Q9UHH9 426 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 YIPF1Q9Y548 306 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 PAXBP1Q9Y5B6 917 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 CAPN6Q9Y6Q1 641 aa13.47□□□□□ -0.25
CLK3-214ENST00000564096 C2orf71A6NGG8 1288 aa13.46□□□□□ -0.25
CLK3-214ENST00000564096 SIGLEC16A6NMB1 481 aa13.46□□□□□ -0.25
CLK3-214ENST00000564096 HHLA1C9JL84 531 aa13.46□□□□□ -0.25
CLK3-214ENST00000564096 PIK3R2O00459 728 aa13.46□□□□□ -0.25
CLK3-214ENST00000564096 GRM6O15303 877 aa13.46□□□□□ -0.25
CLK3-214ENST00000564096 DAB1O75553 588 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms