RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 PCDHGB2Q9Y5G2 931 aa6.61□□□□□ -1.35
TCF4-213ENST00000562543 JMJD1CQ15652 2540 aa6.61□□□□□ -1.35
TCF4-213ENST00000562543 TDRD15B5MCY1 1934 aaKnown RBP6.6□□□□□ -1.35
TCF4-213ENST00000562543 GSG1L2A8MUP6 293 aa6.6□□□□□ -1.35
TCF4-213ENST00000562543 AP5Z1O43299 807 aa6.6□□□□□ -1.35
TCF4-213ENST00000562543 MOSPD3O75425 235 aa6.6□□□□□ -1.35
TCF4-213ENST00000562543 STAM2O75886 525 aa6.6□□□□□ -1.35
TCF4-213ENST00000562543 CHGBP05060 677 aa6.6□□□□□ -1.35
TCF4-213ENST00000562543 KLRC1P26715 233 aa6.6□□□□□ -1.35
TCF4-213ENST00000562543 ARNTP27540 789 aa6.6□□□□□ -1.35
TCF4-213ENST00000562543 CASRP41180 1078 aa6.6□□□□□ -1.35
TCF4-213ENST00000562543 TNK2Q07912 1038 aa6.6□□□□□ -1.35
TCF4-213ENST00000562543 ZNF543Q08ER8 600 aa6.6□□□□□ -1.35
TCF4-213ENST00000562543 SCRN1Q12765 414 aa6.6□□□□□ -1.35
TCF4-213ENST00000562543 NCAPHQ15003 741 aa6.6□□□□□ -1.35
TCF4-213ENST00000562543 SKIDA1Q1XH10 827 aa6.6□□□□□ -1.35
TCF4-213ENST00000562543 PLEKHG6Q3KR16 790 aa6.6□□□□□ -1.35
TCF4-213ENST00000562543 ARHGAP29Q52LW3 1261 aa6.6□□□□□ -1.35
TCF4-213ENST00000562543 RTP2Q5QGT7 225 aa6.6□□□□□ -1.35
TCF4-213ENST00000562543 HES3Q5TGS1 186 aa6.6□□□□□ -1.35
TCF4-213ENST00000562543 FUT10Q6P4F1 479 aa6.6□□□□□ -1.35
TCF4-213ENST00000562543 GIMAP6Q6P9H5 292 aa6.6□□□□□ -1.35
TCF4-213ENST00000562543 C12orf40Q86WS4 652 aa6.6□□□□□ -1.35
TCF4-213ENST00000562543 COLGALT2Q8IYK4 626 aa6.6□□□□□ -1.35
TCF4-213ENST00000562543 URGCPQ8TCY9 931 aa6.6□□□□□ -1.35
TCF4-213ENST00000562543 EAF2Q96CJ1 260 aaPredicted RBP6.6□□□□□ -1.35
TCF4-213ENST00000562543 CBX8Q9HC52 389 aa6.6□□□□□ -1.35
TCF4-213ENST00000562543 EPB41L4AQ9HCS5 686 aaPredicted RBP6.6□□□□□ -1.35
TCF4-213ENST00000562543 PCDHGA1Q9Y5H4 931 aa6.6□□□□□ -1.35
TCF4-213ENST00000562543 SNX11Q9Y5W9 270 aa6.6□□□□□ -1.35
TCF4-213ENST00000562543 RP1L1Q8IWN7 2480 aaPredicted RBP6.6□□□□□ -1.35
TCF4-213ENST00000562543 SDK2Q58EX2 2172 aa6.59□□□□□ -1.35
TCF4-213ENST00000562543 PNMA6EA0A0J9YXQ4 647 aa6.59□□□□□ -1.35
TCF4-213ENST00000562543 ZNF197O14709 1029 aa6.59□□□□□ -1.35
TCF4-213ENST00000562543 ADAM12O43184 909 aa6.59□□□□□ -1.35
TCF4-213ENST00000562543 CILPO75339 1184 aa6.59□□□□□ -1.35
TCF4-213ENST00000562543 RECQL4O94761 1208 aa6.59□□□□□ -1.35
TCF4-213ENST00000562543 VTNP04004 478 aa6.59□□□□□ -1.35
TCF4-213ENST00000562543 SNHG28P0DPA3 235 aa6.59□□□□□ -1.35
TCF4-213ENST00000562543 KCNA2P16389 499 aa6.59□□□□□ -1.35
TCF4-213ENST00000562543 PTPN2P17706 415 aa6.59□□□□□ -1.35
TCF4-213ENST00000562543 DRD1P21728 446 aa6.59□□□□□ -1.35
TCF4-213ENST00000562543 EIF4BP23588 611 aaKnown RBP6.59□□□□□ -1.35
TCF4-213ENST00000562543 NTF4P34130 210 aa6.59□□□□□ -1.35
TCF4-213ENST00000562543 OR1G1P47890 313 aa6.59□□□□□ -1.35
TCF4-213ENST00000562543 ZNF33AQ06730 810 aa6.59□□□□□ -1.35
TCF4-213ENST00000562543 LCNL1Q6ZST4 164 aa6.59□□□□□ -1.35
TCF4-213ENST00000562543 GIMAP8Q8ND71 665 aaPredicted RBP6.59□□□□□ -1.35
TCF4-213ENST00000562543 ASB11Q8WXH4 323 aa6.59□□□□□ -1.35
TCF4-213ENST00000562543 FAM20AQ96MK3 541 aa6.59□□□□□ -1.35
TCF4-213ENST00000562543 LRRC3BQ96PB8 259 aa6.59□□□□□ -1.35
TCF4-213ENST00000562543 FAM193BQ96PV7 902 aaPredicted RBP6.59□□□□□ -1.35
TCF4-213ENST00000562543 KRTAP4-11Q9BYQ6 195 aa6.59□□□□□ -1.35
TCF4-213ENST00000562543 SLC25A18Q9H1K4 315 aa6.59□□□□□ -1.35
TCF4-213ENST00000562543 FBRSL1Q9HCM7 1045 aaKnown RBP6.59□□□□□ -1.35
TCF4-213ENST00000562543 MAP3K20Q9NYL2 800 aaKnown RBP6.59□□□□□ -1.35
TCF4-213ENST00000562543 GMIPQ9P107 970 aa6.59□□□□□ -1.35
TCF4-213ENST00000562543 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.59□□□□□ -1.35
TCF4-213ENST00000562543 PLAAQ9Y263 795 aa6.59□□□□□ -1.35
TCF4-213ENST00000562543 ANK1P16157 1881 aa6.59□□□□□ -1.35
TCF4-213ENST00000562543 GOLIM4O00461 696 aa6.58□□□□□ -1.36
TCF4-213ENST00000562543 ZNF623O75123 536 aa6.58□□□□□ -1.36
TCF4-213ENST00000562543 CLDN1O95832 211 aa6.58□□□□□ -1.36
TCF4-213ENST00000562543 PRF1P14222 555 aa6.58□□□□□ -1.36
TCF4-213ENST00000562543 FGFR4P22455 802 aa6.58□□□□□ -1.36
TCF4-213ENST00000562543 HOXA13P31271 388 aaPredicted RBP6.58□□□□□ -1.36
TCF4-213ENST00000562543 EPHA5P54756 1037 aa6.58□□□□□ -1.36
TCF4-213ENST00000562543 INHBCP55103 352 aa6.58□□□□□ -1.36
TCF4-213ENST00000562543 PTH1RQ03431 593 aa6.58□□□□□ -1.36
TCF4-213ENST00000562543 DSC1Q08554 894 aa6.58□□□□□ -1.36
TCF4-213ENST00000562543 ITPRIPL2Q3MIP1 535 aa6.58□□□□□ -1.36
TCF4-213ENST00000562543 ARL13BQ3SXY8 428 aa6.58□□□□□ -1.36
TCF4-213ENST00000562543 DCAF6Q58WW2 860 aa6.58□□□□□ -1.36
TCF4-213ENST00000562543 FBXL19Q6PCT2 694 aa6.58□□□□□ -1.36
TCF4-213ENST00000562543 NXPE4Q6UWF7 544 aa6.58□□□□□ -1.36
TCF4-213ENST00000562543 PDZD4Q76G19 769 aaPredicted RBP6.58□□□□□ -1.36
TCF4-213ENST00000562543 HAUS6Q7Z4H7 955 aa6.58□□□□□ -1.36
TCF4-213ENST00000562543 C1QL4Q86Z23 238 aa6.58□□□□□ -1.36
TCF4-213ENST00000562543 SLC41A1Q8IVJ1 513 aa6.58□□□□□ -1.36
TCF4-213ENST00000562543 SPATA3Q8NHX4 192 aa6.58□□□□□ -1.36
TCF4-213ENST00000562543 LNX1Q8TBB1 728 aaPredicted RBP6.58□□□□□ -1.36
TCF4-213ENST00000562543 ZNF564Q8TBZ8 553 aaPredicted RBP6.58□□□□□ -1.36
TCF4-213ENST00000562543 EXTL1Q92935 676 aa6.58□□□□□ -1.36
TCF4-213ENST00000562543 MIB2Q96AX9 1013 aa6.58□□□□□ -1.36
TCF4-213ENST00000562543 PUS7LQ9H0K6 701 aaKnown RBP6.58□□□□□ -1.36
TCF4-213ENST00000562543 CPVLQ9H3G5 476 aa6.58□□□□□ -1.36
TCF4-213ENST00000562543 SUSD2Q9UGT4 822 aa6.58□□□□□ -1.36
TCF4-213ENST00000562543 TMEM131Q92545 1883 aa6.58□□□□□ -1.36
TCF4-213ENST00000562543 CSPG4Q6UVK1 2322 aa6.58□□□□□ -1.36
TCF4-213ENST00000562543 COL1A2P08123 1366 aa6.57□□□□□ -1.36
TCF4-213ENST00000562543 ARID2Q68CP9 1835 aa6.57□□□□□ -1.36
TCF4-213ENST00000562543 ARHGEF37A1IGU5 675 aa6.57□□□□□ -1.36
TCF4-213ENST00000562543 FAM155BO75949 473 aa6.57□□□□□ -1.36
TCF4-213ENST00000562543 C22orf31O95567 290 aa6.57□□□□□ -1.36
TCF4-213ENST00000562543 CER1O95813 267 aa6.57□□□□□ -1.36
TCF4-213ENST00000562543 POMCP01189 267 aa6.57□□□□□ -1.36
TCF4-213ENST00000562543 CDK4P11802 303 aa6.57□□□□□ -1.36
TCF4-213ENST00000562543 HNRNPLP14866 589 aaKnown RBP eCLIP6.57□□□□□ -1.362e-6■■■■□ 21.9
TCF4-213ENST00000562543 DARSP14868 501 aaKnown RBP6.57□□□□□ -1.36
TCF4-213ENST00000562543 NME2P22392 152 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms