RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 C2orf15Q8WU43 125 aaKnown RBP15□□□□□ -0.01
COMMD4-205ENST00000562310 UBXN4Q92575 508 aa15□□□□□ -0.01
COMMD4-205ENST00000562310 ALG3Q92685 438 aa15□□□□□ -0.01
COMMD4-205ENST00000562310 KRT35Q92764 455 aa15□□□□□ -0.01
COMMD4-205ENST00000562310 IGSF21Q96ID5 467 aa15□□□□□ -0.01
COMMD4-205ENST00000562310 RNPC3Q96LT9 517 aaKnown RBP15□□□□□ -0.01
COMMD4-205ENST00000562310 YME1L1Q96TA2 773 aa15□□□□□ -0.01
COMMD4-205ENST00000562310 SMOQ99835 787 aa15□□□□□ -0.01
COMMD4-205ENST00000562310 TRIM62Q9BVG3 475 aa15□□□□□ -0.01
COMMD4-205ENST00000562310 GPR62Q9BZJ7 368 aa15□□□□□ -0.01
COMMD4-205ENST00000562310 CNGB3Q9NQW8 809 aa15□□□□□ -0.01
COMMD4-205ENST00000562310 AAASQ9NRG9 546 aa15□□□□□ -0.01
COMMD4-205ENST00000562310 DDX56Q9NY93 547 aaKnown RBP15□□□□□ -0.01
COMMD4-205ENST00000562310 ZBBXA8MT70 800 aa14.99□□□□□ -0.01
COMMD4-205ENST00000562310 PDE2AO00408 941 aaPredicted RBP14.99□□□□□ -0.01
COMMD4-205ENST00000562310 DAB1O75553 588 aa14.99□□□□□ -0.01
COMMD4-205ENST00000562310 GABBR2O75899 941 aa14.99□□□□□ -0.01
COMMD4-205ENST00000562310 KRT7P08729 469 aa14.99□□□□□ -0.01
COMMD4-205ENST00000562310 SDC4P31431 198 aa14.99□□□□□ -0.01
COMMD4-205ENST00000562310 PCK1P35558 622 aa14.99□□□□□ -0.01
COMMD4-205ENST00000562310 CETN2P41208 172 aa14.99□□□□□ -0.01
COMMD4-205ENST00000562310 PTPN9P43378 593 aa14.99□□□□□ -0.01
COMMD4-205ENST00000562310 MARCKSL1P49006 195 aa14.99□□□□□ -0.01
COMMD4-205ENST00000562310 USP41Q3LFD5 358 aa14.99□□□□□ -0.01
COMMD4-205ENST00000562310 SLC39A12Q504Y0 691 aa14.99□□□□□ -0.01
COMMD4-205ENST00000562310 DCAF12L1Q5VU92 463 aa14.99□□□□□ -0.01
COMMD4-205ENST00000562310 CCDC70Q6NSX1 233 aa14.99□□□□□ -0.01
COMMD4-205ENST00000562310 CC2D1AQ6P1N0 951 aaPredicted RBP14.99□□□□□ -0.01
COMMD4-205ENST00000562310 VSTM1Q6UX27 236 aa14.99□□□□□ -0.01
COMMD4-205ENST00000562310 RSRC2Q7L4I2 434 aaKnown RBP14.99□□□□□ -0.01
COMMD4-205ENST00000562310 OTOP2Q7RTS6 562 aa14.99□□□□□ -0.01
COMMD4-205ENST00000562310 CEP57Q86XR8 500 aa14.99□□□□□ -0.01
COMMD4-205ENST00000562310 SCUBE3Q8IX30 993 aa14.99□□□□□ -0.01
COMMD4-205ENST00000562310 RNF168Q8IYW5 571 aaPredicted RBP14.99□□□□□ -0.01
COMMD4-205ENST00000562310 SLC39A11Q8N1S5 342 aa14.99□□□□□ -0.01
COMMD4-205ENST00000562310 IRGQQ8WZA9 623 aa14.99□□□□□ -0.01
COMMD4-205ENST00000562310 BADQ92934 168 aa14.99□□□□□ -0.01
COMMD4-205ENST00000562310 TMEM169Q96HH4 297 aa14.99□□□□□ -0.01
COMMD4-205ENST00000562310 TMEM209Q96SK2 561 aa14.99□□□□□ -0.01
COMMD4-205ENST00000562310 HERC2P3Q9BVR0 1158 aa14.99□□□□□ -0.01
COMMD4-205ENST00000562310 MTIF3Q9H2K0 278 aaKnown RBP14.99□□□□□ -0.01
COMMD4-205ENST00000562310 TMLHEQ9NVH6 421 aa14.99□□□□□ -0.01
COMMD4-205ENST00000562310 USTQ9Y2C2 406 aa14.99□□□□□ -0.01
COMMD4-205ENST00000562310 PCDHB5Q9Y5E4 795 aa14.99□□□□□ -0.01
COMMD4-205ENST00000562310 BRCA2P51587 3418 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 MYO16Q9Y6X6 1858 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 GOLGA6L10A0A0M3HER8 536 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 NT5C1B-RDH14C9J2C7 533 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 CCDC188H7C350 402 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 PIK3R2O00459 728 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 DYNC1I1O14576 645 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 TRIM66O15016 1216 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 BEST1O76090 585 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 PDGFRAP16234 1089 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 BDNFP23560 247 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 SSR1P43307 286 aaKnown RBP14.98□□□□□ -0.01
COMMD4-205ENST00000562310 TKTL1P51854 596 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 MRPS5P82675 430 aaKnown RBP14.98□□□□□ -0.01
COMMD4-205ENST00000562310 ADCY1Q08828 1119 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 PPP2R5EQ16537 467 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 TEX35Q5T0J7 233 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 FAM117BQ6P1L5 589 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 ZNF365Q70YC5 407 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 LRRTM3Q86VH5 581 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 TMEM173Q86WV6 379 aaPredicted RBP14.98□□□□□ -0.01
COMMD4-205ENST00000562310 CPNE8Q86YQ8 564 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 EMC1Q8N766 993 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 COLGALT1Q8NBJ5 622 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 LRRN4CLQ8ND94 238 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 SPATA4Q8NEY3 305 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 ZMIZ2Q8NF64 920 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 EXD1Q8NHP7 514 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 BCL7CQ8WUZ0 217 aaPredicted RBP14.98□□□□□ -0.01
COMMD4-205ENST00000562310 MAIP1Q8WWC4 291 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 RXFP2Q8WXD0 754 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 PIK3R5Q8WYR1 880 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 RBM41Q96IZ5 413 aaKnown RBP14.98□□□□□ -0.01
COMMD4-205ENST00000562310 SLC9A7Q96T83 725 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 SPG21Q9NZD8 308 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 BACE2Q9Y5Z0 518 aa14.98□□□□□ -0.01
COMMD4-205ENST00000562310 MRPL42Q9Y6G3 142 aaKnown RBP14.98□□□□□ -0.01
COMMD4-205ENST00000562310 PLXNA3P51805 1871 aa14.97□□□□□ -0.01
COMMD4-205ENST00000562310 COL4A4P53420 1690 aaPredicted RBP14.97□□□□□ -0.01
COMMD4-205ENST00000562310 HHLA1C9JL84 531 aa14.97□□□□□ -0.01
COMMD4-205ENST00000562310 F8VP50 259 aa14.97□□□□□ -0.01
COMMD4-205ENST00000562310 TBC1D4O60343 1298 aa14.97□□□□□ -0.01
COMMD4-205ENST00000562310 LRCH4O75427 683 aa14.97□□□□□ -0.01
COMMD4-205ENST00000562310 GJB5O95377 273 aa14.97□□□□□ -0.01
COMMD4-205ENST00000562310 SOD2P04179 222 aa14.97□□□□□ -0.01
COMMD4-205ENST00000562310 CPB1P15086 417 aa14.97□□□□□ -0.01
COMMD4-205ENST00000562310 FLT3P36888 993 aa14.97□□□□□ -0.01
COMMD4-205ENST00000562310 PBX3P40426 434 aa14.97□□□□□ -0.01
COMMD4-205ENST00000562310 DAOAP59103 153 aa14.97□□□□□ -0.01
COMMD4-205ENST00000562310 TAS2R40P59535 323 aa14.97□□□□□ -0.01
COMMD4-205ENST00000562310 RNASE9P60153 205 aaKnown RBP14.97□□□□□ -0.01
COMMD4-205ENST00000562310 HTRA4P83105 476 aaPredicted RBP14.97□□□□□ -0.01
COMMD4-205ENST00000562310 GPR17Q13304 367 aa14.97□□□□□ -0.01
COMMD4-205ENST00000562310 RTP2Q5QGT7 225 aa14.97□□□□□ -0.01
COMMD4-205ENST00000562310 C16orf59Q7L2K0 433 aa14.97□□□□□ -0.01
COMMD4-205ENST00000562310 GPR65Q8IYL9 337 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms