RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 FAM184BQ9ULE4 1060 aa6.8□□□□□ -1.32
LRRC28-220ENST00000561253 GABRQQ9UN88 632 aa6.8□□□□□ -1.32
LRRC28-220ENST00000561253 LIMCH1Q9UPQ0 1083 aa6.8□□□□□ -1.32
LRRC28-220ENST00000561253 GIT1Q9Y2X7 761 aa6.8□□□□□ -1.32
LRRC28-220ENST00000561253 VWA7Q9Y334 891 aa6.8□□□□□ -1.32
LRRC28-220ENST00000561253 A0A0A6YYK5 440 aaPredicted RBP6.79□□□□□ -1.32
LRRC28-220ENST00000561253 SLC15A5A6NIM6 579 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 DAPK3O43293 454 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 PRPF3O43395 683 aaKnown RBP6.79□□□□□ -1.32
LRRC28-220ENST00000561253 STRNO43815 780 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 JAK2O60674 1132 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 DTNBO60941 627 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 SEC24DO94855 1032 aaPredicted RBP6.79□□□□□ -1.32
LRRC28-220ENST00000561253 ABLIM3O94929 683 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 IL33O95760 270 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 C8AP07357 584 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 ADORA2AP29274 412 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 COPB2P35606 906 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 FLT3LGP49771 235 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 HSD17B4P51659 736 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 RRADP55042 308 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 CCNA1P78396 465 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 MGAT5Q09328 741 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 CUL4AQ13619 759 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 USP10Q14694 798 aaKnown RBP6.79□□□□□ -1.32
LRRC28-220ENST00000561253 PFKFB3Q16875 520 aaPredicted RBP6.79□□□□□ -1.32
LRRC28-220ENST00000561253 CCDC174Q6PII3 467 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 PLEKHH3Q7Z736 793 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 CTU1Q7Z7A3 348 aaKnown RBP6.79□□□□□ -1.32
LRRC28-220ENST00000561253 ZNF761Q86XN6 746 aaPredicted RBP6.79□□□□□ -1.32
LRRC28-220ENST00000561253 CHPFQ8IZ52 775 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 CPXCR1Q8N123 301 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 PPM1NQ8N819 430 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 NECAB1Q8N987 351 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 JPH3Q8WXH2 748 aaPredicted RBP6.79□□□□□ -1.32
LRRC28-220ENST00000561253 PHKBQ93100 1093 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 SNX21Q969T3 373 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 PAWRQ96IZ0 340 aaKnown RBP6.79□□□□□ -1.32
LRRC28-220ENST00000561253 TMX3Q96JJ7 454 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 TOX2Q96NM4 488 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 FDXACB1Q9BRP7 624 aaPredicted RBP6.79□□□□□ -1.32
LRRC28-220ENST00000561253 SOX7Q9BT81 388 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 RNF26Q9BY78 433 aaPredicted RBP6.79□□□□□ -1.32
LRRC28-220ENST00000561253 RHOBTB2Q9BYZ6 727 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 OSBPL6Q9BZF3 934 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 MAF1Q9H063 256 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 VAT1LQ9HCJ6 419 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 TCF7L1Q9HCS4 588 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 RNF146Q9NTX7 359 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 CYP39A1Q9NYL5 469 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 FLRT1Q9NZU1 646 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 COL20A1Q9P218 1284 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 CCPG1Q9ULG6 757 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 ANKRD6Q9Y2G4 727 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 LCTP09848 1927 aa6.79□□□□□ -1.32
LRRC28-220ENST00000561253 FRMPD4Q14CM0 1322 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 STK36Q9NRP7 1315 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 CCDC196A0A1B0GTZ2 297 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 MEIS2O14770 477 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 TNPO2O14787 897 aaKnown RBP6.78□□□□□ -1.32
LRRC28-220ENST00000561253 TSPAN6O43657 245 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 EDIL3O43854 480 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 NDUFS2O75306 463 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 SCGB1D2O95969 90 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 PF4V1P10720 104 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 HNRNPLP14866 589 aaKnown RBP eCLIP6.78□□□□□ -1.32
LRRC28-220ENST00000561253 EDNRBP24530 442 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 CSF2RBP32927 897 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 MRE11P49959 708 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 SLURP1P55000 103 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 PRMT2P55345 433 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 CNTN2Q02246 1040 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 IKQ13123 557 aaPredicted RBP6.78□□□□□ -1.32
LRRC28-220ENST00000561253 STK3Q13188 491 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 PLS1Q14651 629 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 PCOLCEQ15113 449 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 LRRC41Q15345 812 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 ZMAT1Q5H9K5 638 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 MAP3K21Q5TCX8 1036 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 TRIM68Q6AZZ1 485 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 SLC30A10Q6XR72 485 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 SYNE3Q6ZMZ3 975 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 LARP4Q71RC2 724 aaKnown RBP eCLIP6.78□□□□□ -1.32
LRRC28-220ENST00000561253 GPR155Q7Z3F1 870 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 FAM124AQ86V42 546 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 CMTR2Q8IYT2 770 aaKnown RBP6.78□□□□□ -1.32
LRRC28-220ENST00000561253 TP53I13Q8NBR0 393 aaPredicted RBP6.78□□□□□ -1.32
LRRC28-220ENST00000561253 MORC4Q8TE76 937 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 SOCS4Q8WXH5 440 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 TRIB2Q92519 343 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 NKD2Q969F2 451 aaPredicted RBP6.78□□□□□ -1.32
LRRC28-220ENST00000561253 COA7Q96BR5 231 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 RRP36Q96EU6 259 aaKnown RBP6.78□□□□□ -1.32
LRRC28-220ENST00000561253 HSPBAP1Q96EW2 488 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 AIFM3Q96NN9 605 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 ACAD9Q9H845 621 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 BARHL2Q9NY43 387 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 FBXO40Q9UH90 709 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 ADAM29Q9UKF5 820 aa6.78□□□□□ -1.32
LRRC28-220ENST00000561253 PNMA2Q9UL42 364 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms