RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 TRPM5Q9NZQ8 1165 aa16.16■□□□□ 0.18
SNRPA1-213ENST00000560856 MYH10P35580 1976 aa16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 OLFM2O95897 454 aa16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 PAEPP09466 180 aa16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 TRIM21P19474 475 aaKnown RBP16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 GDI1P31150 447 aa16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 PPP3CCP48454 512 aa16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 KIF11P52732 1056 aa16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 ZNF268Q14587 947 aaPredicted RBP16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 EXOC3L4Q17RC7 722 aa16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 KLHL40Q2TBA0 621 aa16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 SLC44A4Q53GD3 710 aa16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 SNX30Q5VWJ9 437 aa16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 CWF19L1Q69YN2 538 aaKnown RBP16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 GJB7Q6PEY0 223 aa16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 TMEM270Q6UE05 265 aa16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 SIX5Q8N196 739 aa16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 ARL14EPQ8N8R7 260 aaPredicted RBP16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 ANKRD52Q8NB46 1076 aa16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 OVCA2Q8WZ82 227 aa16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 DNAI2Q9GZS0 605 aa16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 RNF38Q9H0F5 515 aa16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 HSD3B7Q9H2F3 369 aa16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 PNPLA8Q9NP80 782 aa16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 UBE2TQ9NPD8 197 aaPredicted RBP16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 TRPV5Q9NQA5 729 aa16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 ARHGEF3Q9NR81 526 aa16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 TDP1Q9NUW8 608 aa16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 FANCLQ9NW38 375 aa16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 CHORDC1Q9UHD1 332 aaPredicted RBP16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 FBXL21Q9UKT6 434 aa16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 KIAA1257Q9ULG3 409 aa16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 CA14Q9ULX7 337 aa16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 PCDHB4Q9Y5E5 795 aa16.15■□□□□ 0.18
SNRPA1-213ENST00000560856 O00370 1275 aa16.14■□□□□ 0.17
SNRPA1-213ENST00000560856 CHADO15335 359 aa16.14■□□□□ 0.17
SNRPA1-213ENST00000560856 OAS1P00973 400 aaKnown RBP16.14■□□□□ 0.17
SNRPA1-213ENST00000560856 CALCAP01258 141 aa16.14■□□□□ 0.17
SNRPA1-213ENST00000560856 VDRP11473 427 aa16.14■□□□□ 0.17
SNRPA1-213ENST00000560856 PFKLP17858 780 aa16.14■□□□□ 0.17
SNRPA1-213ENST00000560856 EEF1GP26641 437 aaKnown RBP16.14■□□□□ 0.17
SNRPA1-213ENST00000560856 AVPR1AP37288 418 aa16.14■□□□□ 0.17
SNRPA1-213ENST00000560856 STARD6P59095 220 aa16.14■□□□□ 0.17
SNRPA1-213ENST00000560856 ZXDBP98169 803 aa16.14■□□□□ 0.17
SNRPA1-213ENST00000560856 PFKPQ01813 784 aa16.14■□□□□ 0.17
SNRPA1-213ENST00000560856 KCNMA1Q12791 1236 aa16.14■□□□□ 0.17
SNRPA1-213ENST00000560856 PKDCCQ504Y2 493 aa16.14■□□□□ 0.17
SNRPA1-213ENST00000560856 SGO2Q562F6 1265 aa16.14■□□□□ 0.17
SNRPA1-213ENST00000560856 CELF5Q8N6W0 485 aaKnown RBP16.14■□□□□ 0.17
SNRPA1-213ENST00000560856 BPIFB1Q8TDL5 484 aa16.14■□□□□ 0.17
SNRPA1-213ENST00000560856 DNASE1L2Q92874 299 aa16.14■□□□□ 0.17
SNRPA1-213ENST00000560856 FBXO32Q969P5 355 aa16.14■□□□□ 0.17
SNRPA1-213ENST00000560856 JAKMIP2Q96AA8 810 aa16.14■□□□□ 0.17
SNRPA1-213ENST00000560856 SLITRK1Q96PX8 696 aa16.14■□□□□ 0.17
SNRPA1-213ENST00000560856 FUCA2Q9BTY2 467 aa16.14■□□□□ 0.17
SNRPA1-213ENST00000560856 DDX23Q9BUQ8 820 aaKnown RBP16.14■□□□□ 0.17
SNRPA1-213ENST00000560856 UBXN6Q9BZV1 441 aa16.14■□□□□ 0.17
SNRPA1-213ENST00000560856 BRD9Q9H8M2 597 aa16.14■□□□□ 0.17
SNRPA1-213ENST00000560856 TRPC7Q9HCX4 862 aa16.14■□□□□ 0.17
SNRPA1-213ENST00000560856 AJAP1Q9UKB5 411 aaPredicted RBP16.14■□□□□ 0.17
SNRPA1-213ENST00000560856 USP3Q9Y6I4 520 aa16.14■□□□□ 0.17
SNRPA1-213ENST00000560856 PATJQ8NI35 1801 aa16.14■□□□□ 0.17
SNRPA1-213ENST00000560856 TRAV19A0A0A6YYK7 116 aa16.13■□□□□ 0.17
SNRPA1-213ENST00000560856 TULP2O00295 520 aa16.13■□□□□ 0.17
SNRPA1-213ENST00000560856 USP17L7P0C7H9 530 aa16.13■□□□□ 0.17
SNRPA1-213ENST00000560856 PRKCSHP14314 528 aaPredicted RBP16.13■□□□□ 0.17
SNRPA1-213ENST00000560856 TCF3P15923 654 aa16.13■□□□□ 0.17
SNRPA1-213ENST00000560856 HDCP19113 662 aa16.13■□□□□ 0.17
SNRPA1-213ENST00000560856 VCPP55072 806 aaKnown RBP16.13■□□□□ 0.17
SNRPA1-213ENST00000560856 IFRD2Q12894 506 aaPredicted RBP16.13■□□□□ 0.17
SNRPA1-213ENST00000560856 RAB41Q5JT25 222 aa16.13■□□□□ 0.17
SNRPA1-213ENST00000560856 RBBP8NLQ8NC74 664 aaPredicted RBP16.13■□□□□ 0.17
SNRPA1-213ENST00000560856 IRF7Q92985 503 aa16.13■□□□□ 0.17
SNRPA1-213ENST00000560856 FAM83CQ9BQN1 747 aa16.13■□□□□ 0.17
SNRPA1-213ENST00000560856 KIF9Q9HAQ2 790 aa16.13■□□□□ 0.17
SNRPA1-213ENST00000560856 GMIPQ9P107 970 aa16.13■□□□□ 0.17
SNRPA1-213ENST00000560856 APEX2Q9UBZ4 518 aa16.13■□□□□ 0.17
SNRPA1-213ENST00000560856 TSPAN16Q9UKR8 245 aa16.13■□□□□ 0.17
SNRPA1-213ENST00000560856 ARHGAP26Q9UNA1 814 aa16.13■□□□□ 0.17
SNRPA1-213ENST00000560856 SCML2Q9UQR0 700 aa16.13■□□□□ 0.17
SNRPA1-213ENST00000560856 COL4A3Q01955 1670 aa16.13■□□□□ 0.17
SNRPA1-213ENST00000560856 COL4A2P08572 1712 aa16.13■□□□□ 0.17
SNRPA1-213ENST00000560856 KIF26AQ9ULI4 1882 aaPredicted RBP16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 MUC6Q6W4X9 2439 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 BECN2A8MW95 431 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 DPYSL4O14531 572 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 ZNF263O14978 683 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 PI15O43692 258 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 GABBR2O75899 941 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 CD19P15391 556 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 ZNF18P17022 549 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 AVPR2P30518 371 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 CLCN5P51795 746 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 SLC7A9P82251 487 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 MYL5Q02045 173 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 PDE4CQ08493 712 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 USP4Q13107 963 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 KRT31Q15323 416 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 MLF2Q15773 248 aaPredicted RBP16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 ZNF77Q15935 545 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms