RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 HPS3Q969F9 1004 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 EEF2KMTQ96G04 330 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 CCDC86Q9H6F5 360 aaKnown RBP6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 C17orf75Q9HAS0 396 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 PRDM6Q9NQX0 595 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 FAM86C1Q9NVL1 165 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 TBCCD1Q9NVR7 557 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 STK32BQ9NY57 414 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 PLK2Q9NYY3 685 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 HAO1Q9UJM8 370 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 G3BP2Q9UN86 482 aaKnown RBP6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 ZNF510Q9Y2H8 683 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 SNCAIPQ9Y6H5 919 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 NFASCO94856 1347 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 KAT6BQ8WYB5 2073 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 SMCO2A6NFE2 343 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 MEIS3P2A8K0S8 358 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 GFRA2O00451 464 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 FSCN2O14926 492 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 EIF3DO15371 548 aaKnown RBP eCLIP6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 EXOC3O60645 756 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 HAUS5O94927 633 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 S100BP04271 92 aaPredicted RBP6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 ASLP04424 464 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 PGRP06401 933 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 FAM200BP0CF97 657 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 NID1P14543 1247 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 SLC9A1P19634 815 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 TNFAIP3P21580 790 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 NR2F2P24468 414 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 TPP2P29144 1249 aaPredicted RBP6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 FOXN2P32314 431 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 IGHMBP2P38935 993 aaKnown RBP6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 SLCO1A2P46721 670 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 CD97P48960 835 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 ACADVLP49748 655 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 RAC1P63000 192 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 IRX4P78413 519 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 DSG1Q02413 1049 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 MCL1Q07820 350 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 PRPF4BQ13523 1007 aaKnown RBP6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 UBE4AQ14139 1066 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 SIX1Q15475 284 aaPredicted RBP6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 TBCCQ15814 346 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 LONRF1Q17RB8 773 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 KNOP1Q1ED39 458 aaKnown RBP6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 CLEC16AQ2KHT3 1053 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 TRMT5Q32P41 509 aaKnown RBP6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 WDR72Q3MJ13 1102 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 KIAA1211LQ6NV74 962 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 TTC27Q6P3X3 843 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 CENPUQ71F23 418 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 NLRP9Q7RTR0 991 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 CLNKQ7Z7G1 428 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 TRABD2AQ86V40 505 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 C12orf40Q86WS4 652 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 CCDC105Q8IYK2 499 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 RNF168Q8IYW5 571 aaPredicted RBP6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 ZSWIM2Q8NEG5 633 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 TTC8Q8TAM2 541 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 TBCKQ8TEA7 893 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 NAT14Q8WUY8 206 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 UCMAQ8WVF2 138 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 SCFD1Q8WVM8 642 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 MAML1Q92585 1016 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 GLG1Q92896 1179 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 ZNF653Q96CK0 615 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 C18orf8Q96DM3 657 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 ATG4CQ96DT6 458 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 PTCD3Q96EY7 689 aaKnown RBP6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 NSL1Q96IY1 281 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 CFAP57Q96MR6 1250 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 CATSPER2Q96P56 530 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 SSBP4Q9BWG4 385 aaPredicted RBP6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 CADM1Q9BY67 442 aaKnown RBP6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 ANKRD2Q9GZV1 360 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 GLT8D2Q9H1C3 349 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 GOLPH3Q9H4A6 298 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 ZNF287Q9HBT7 754 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 DCP1AQ9NPI6 582 aaPredicted RBP6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 GALNT8Q9NY28 637 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 DDX56Q9NY93 547 aaKnown RBP6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 NINJ2Q9NZG7 142 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 GMIPQ9P107 970 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 SLC24A2Q9UI40 661 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 PPP1R9AQ9ULJ8 1098 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 ZNF148Q9UQR1 794 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 THRAP3Q9Y2W1 955 aaKnown RBP6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 NR2E1Q9Y466 385 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 ROBO1Q9Y6N7 1651 aa6.26□□□□□ -1.41
SNRPA1-209ENST00000560307 SLIT2O94813 1529 aa6.25□□□□□ -1.41
SNRPA1-209ENST00000560307 A0A1W2PRG0 241 aa6.25□□□□□ -1.41
SNRPA1-209ENST00000560307 SLC22A31A6NKX4 558 aa6.25□□□□□ -1.41
SNRPA1-209ENST00000560307 ADARB2-AS1A8MUL3 147 aa6.25□□□□□ -1.41
SNRPA1-209ENST00000560307 UPK3BL1B0FP48 263 aa6.25□□□□□ -1.41
SNRPA1-209ENST00000560307 UPK3BL2E5RIL1 263 aa6.25□□□□□ -1.41
SNRPA1-209ENST00000560307 CAPN9O14815 690 aa6.25□□□□□ -1.41
SNRPA1-209ENST00000560307 TM9SF1O15321 606 aa6.25□□□□□ -1.41
SNRPA1-209ENST00000560307 GSC2O15499 205 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms