RNA–Protein interactions for RNA: ENST00000558848.1

SEMA4B-205, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 639 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-205ENST00000558848 HHIPQ96QV1 700 aa12.57□□□□□ -0.4
SEMA4B-205ENST00000558848 FNBP1Q96RU3 617 aa12.57□□□□□ -0.4
SEMA4B-205ENST00000558848 B3GNT5Q9BYG0 378 aa12.57□□□□□ -0.4
SEMA4B-205ENST00000558848 CNTNAP3Q9BZ76 1288 aa12.57□□□□□ -0.4
SEMA4B-205ENST00000558848 ZNF518BQ9C0D4 1074 aa12.57□□□□□ -0.4
SEMA4B-205ENST00000558848 ELOVL4Q9GZR5 314 aa12.57□□□□□ -0.4
SEMA4B-205ENST00000558848 BLZF1Q9H2G9 400 aa12.57□□□□□ -0.4
SEMA4B-205ENST00000558848 ARRDC1-AS1Q9H2J1 176 aa12.57□□□□□ -0.4
SEMA4B-205ENST00000558848 SNX25Q9H3E2 840 aa12.57□□□□□ -0.4
SEMA4B-205ENST00000558848 RXFP3Q9NSD7 469 aa12.57□□□□□ -0.4
SEMA4B-205ENST00000558848 ANTXRLA6NF34 631 aa12.56□□□□□ -0.4
SEMA4B-205ENST00000558848 TULP1O00294 542 aaPredicted RBP12.56□□□□□ -0.4
SEMA4B-205ENST00000558848 APBB3O95704 486 aa12.56□□□□□ -0.4
SEMA4B-205ENST00000558848 C4BPAP04003 597 aaKnown RBP12.56□□□□□ -0.4
SEMA4B-205ENST00000558848 CYP17A1P05093 508 aa12.56□□□□□ -0.4
SEMA4B-205ENST00000558848 ZSCAN22P10073 491 aaPredicted RBP12.56□□□□□ -0.4
SEMA4B-205ENST00000558848 ANXA13P27216 316 aa12.56□□□□□ -0.4
SEMA4B-205ENST00000558848 EIF2DP41214 584 aaKnown RBP12.56□□□□□ -0.4
SEMA4B-205ENST00000558848 MESP2Q0VG99 397 aa12.56□□□□□ -0.4
SEMA4B-205ENST00000558848 TAF10Q12962 218 aa12.56□□□□□ -0.4
SEMA4B-205ENST00000558848 SF3A2Q15428 464 aaKnown RBP12.56□□□□□ -0.4
SEMA4B-205ENST00000558848 PPM1JQ5JR12 505 aa12.56□□□□□ -0.4
SEMA4B-205ENST00000558848 TDRD10Q5VZ19 366 aaKnown RBP12.56□□□□□ -0.4
SEMA4B-205ENST00000558848 RHBDF2Q6PJF5 856 aa12.56□□□□□ -0.4
SEMA4B-205ENST00000558848 OR6B3Q8NGW1 331 aa12.56□□□□□ -0.4
SEMA4B-205ENST00000558848 OVCA2Q8WZ82 227 aa12.56□□□□□ -0.4
SEMA4B-205ENST00000558848 DDX1Q92499 740 aaKnown RBP12.56□□□□□ -0.4
SEMA4B-205ENST00000558848 SYAP1Q96A49 352 aaPredicted RBP12.56□□□□□ -0.4
SEMA4B-205ENST00000558848 SLC39A2Q9NP94 309 aa12.56□□□□□ -0.4
SEMA4B-205ENST00000558848 RCOR1Q9UKL0 485 aa12.56□□□□□ -0.4
SEMA4B-205ENST00000558848 KIAA1549LQ6ZVL6 1849 aa12.55□□□□□ -0.4
SEMA4B-205ENST00000558848 LRRIQ3A6PVS8 624 aaPredicted RBP12.55□□□□□ -0.4
SEMA4B-205ENST00000558848 A8MXQ7 604 aa12.55□□□□□ -0.4
SEMA4B-205ENST00000558848 CLDN5O00501 218 aa12.55□□□□□ -0.4
SEMA4B-205ENST00000558848 ACTN4O43707 911 aaKnown RBP12.55□□□□□ -0.4
SEMA4B-205ENST00000558848 VNN1O95497 513 aa12.55□□□□□ -0.4
SEMA4B-205ENST00000558848 F13A1P00488 732 aa12.55□□□□□ -0.4
SEMA4B-205ENST00000558848 SLFN14P0C7P3 912 aa12.55□□□□□ -0.4
SEMA4B-205ENST00000558848 ZDHHC11BP0C7U3 371 aa12.55□□□□□ -0.4
SEMA4B-205ENST00000558848 CCDC192P0DO97 292 aa12.55□□□□□ -0.4
SEMA4B-205ENST00000558848 MPLP40238 635 aa12.55□□□□□ -0.4
SEMA4B-205ENST00000558848 CASP4P49662 377 aa12.55□□□□□ -0.4
SEMA4B-205ENST00000558848 AP3M2P53677 418 aa12.55□□□□□ -0.4
SEMA4B-205ENST00000558848 TNNC1P63316 161 aa12.55□□□□□ -0.4
SEMA4B-205ENST00000558848 STK4Q13043 487 aa12.55□□□□□ -0.4
SEMA4B-205ENST00000558848 DHCR24Q15392 516 aa12.55□□□□□ -0.4
SEMA4B-205ENST00000558848 FILIP1Q7Z7B0 1213 aa12.55□□□□□ -0.4
SEMA4B-205ENST00000558848 NUP93Q8N1F7 819 aa12.55□□□□□ -0.4
SEMA4B-205ENST00000558848 PHTF2Q8N3S3 785 aa12.55□□□□□ -0.4
SEMA4B-205ENST00000558848 KIAA0895Q8NCT3 520 aa12.55□□□□□ -0.4
SEMA4B-205ENST00000558848 GOLGA5Q8TBA6 731 aa12.55□□□□□ -0.4
SEMA4B-205ENST00000558848 KCTD10Q9H3F6 313 aa12.55□□□□□ -0.4
SEMA4B-205ENST00000558848 VPS45Q9NRW7 570 aa12.55□□□□□ -0.4
SEMA4B-205ENST00000558848 MMP17Q9ULZ9 603 aa12.55□□□□□ -0.4
SEMA4B-205ENST00000558848 CPQQ9Y646 472 aa12.55□□□□□ -0.4
SEMA4B-205ENST00000558848 EML5Q05BV3 1969 aa12.55□□□□□ -0.4
SEMA4B-205ENST00000558848 HELZP42694 1942 aaKnown RBP12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 ZNF638Q14966 1978 aaKnown RBP12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 BCLAF3A2AJT9 711 aaKnown RBP12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 SLC9A3R1O14745 358 aaPredicted RBP12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 DCLK1O15075 740 aa12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 EXOC3O60645 756 aa12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 RTN3O95197 1032 aaPredicted RBP12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 YWHAQP27348 245 aa12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 KIR2DL1P43626 348 aaPredicted RBP12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 TUBP50607 506 aa12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 CDH8P55286 799 aa12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 MCCD1P59942 119 aaPredicted RBP12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 MRPS21P82921 87 aaKnown RBP12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 TRPC3Q13507 836 aa12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 CCDC6Q16204 474 aa12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 CRY1Q16526 586 aa12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 HSF5Q4G112 596 aaPredicted RBP12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 FAM35AQ86V20 835 aa12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 DDX42Q86XP3 938 aaKnown RBP eCLIP12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 FUKQ8N0W3 1084 aa12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 CRYBG2Q8N1P7 616 aa12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 PDZD8Q8NEN9 1154 aa12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 OLIG1Q8TAK6 271 aa12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 CNOT6LQ96LI5 555 aaKnown RBP12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 SLITRK1Q96PX8 696 aa12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 KCNK16Q96T55 309 aa12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 SDCBP2Q9H190 292 aa12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 SMYD3Q9H7B4 428 aa12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 CSNK1G1Q9HCP0 422 aa12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 COMMD8Q9NX08 183 aa12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 FAM13BQ9NYF5 915 aa12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 NXF1Q9UBU9 619 aaKnown RBP12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 CHD8Q9HCK8 2581 aa12.54□□□□□ -0.4
SEMA4B-205ENST00000558848 MYO16Q9Y6X6 1858 aa12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 SPAG17Q6Q759 2223 aa12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 SDK1Q7Z5N4 2213 aa12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 E2F8A0AVK6 867 aa12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 COCHO43405 550 aa12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 GREM1O60565 184 aa12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 HNRNPLP14866 589 aaKnown RBP eCLIP12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 AFMP43652 599 aa12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 SLC6A11P48066 632 aa12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 ME1P48163 572 aa12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 NCOA4Q13772 614 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms