RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 ADH1AP07327 375 aa17.75■□□□□ 0.43
SNX1-203ENST00000558040 SCNN1AP37088 669 aa17.75■□□□□ 0.43
SNX1-203ENST00000558040 PBX2P40425 430 aa17.75■□□□□ 0.43
SNX1-203ENST00000558040 TUFMP49411 452 aaKnown RBP17.75■□□□□ 0.43
SNX1-203ENST00000558040 CACNA2D1P54289 1103 aa17.75■□□□□ 0.43
SNX1-203ENST00000558040 GNG11P61952 73 aa17.75■□□□□ 0.43
SNX1-203ENST00000558040 ADCY1Q08828 1119 aa17.75■□□□□ 0.43
SNX1-203ENST00000558040 ADIGQ0VDE8 80 aa17.75■□□□□ 0.43
SNX1-203ENST00000558040 MGAT5BQ3V5L5 792 aa17.75■□□□□ 0.43
SNX1-203ENST00000558040 RAB41Q5JT25 222 aa17.75■□□□□ 0.43
SNX1-203ENST00000558040 ZNF569Q5MCW4 686 aa17.75■□□□□ 0.43
SNX1-203ENST00000558040 FAM102AQ5T9C2 384 aaPredicted RBP17.75■□□□□ 0.43
SNX1-203ENST00000558040 PDE12Q6L8Q7 609 aaKnown RBP17.75■□□□□ 0.43
SNX1-203ENST00000558040 DCUN1D2Q6PH85 259 aa17.75■□□□□ 0.43
SNX1-203ENST00000558040 FAM183BPQ6ZVS7 135 aa17.75■□□□□ 0.43
SNX1-203ENST00000558040 PHLDB2Q86SQ0 1253 aa17.75■□□□□ 0.43
SNX1-203ENST00000558040 SYCE1Q8N0S2 351 aa17.75■□□□□ 0.43
SNX1-203ENST00000558040 MCRS1Q96EZ8 462 aa17.75■□□□□ 0.43
SNX1-203ENST00000558040 CEP295NLQ96MC4 621 aa17.75■□□□□ 0.43
SNX1-203ENST00000558040 SEPT5Q99719 369 aaPredicted RBP17.75■□□□□ 0.43
SNX1-203ENST00000558040 OSGEPQ9NPF4 335 aa17.75■□□□□ 0.43
SNX1-203ENST00000558040 CNGB3Q9NQW8 809 aa17.75■□□□□ 0.43
SNX1-203ENST00000558040 TMEM30AQ9NV96 361 aa17.75■□□□□ 0.43
SNX1-203ENST00000558040 TJP2Q9UDY2 1190 aa17.75■□□□□ 0.43
SNX1-203ENST00000558040 SALL4Q9UJQ4 1053 aa17.75■□□□□ 0.43
SNX1-203ENST00000558040 MYH10P35580 1976 aa17.75■□□□□ 0.43
SNX1-203ENST00000558040 TCRBV5S1A1TA0A578 114 aa17.74■□□□□ 0.43
SNX1-203ENST00000558040 SIGLEC16A6NMB1 481 aa17.74■□□□□ 0.43
SNX1-203ENST00000558040 HHLA1C9JL84 531 aa17.74■□□□□ 0.43
SNX1-203ENST00000558040 PIK3R2O00459 728 aa17.74■□□□□ 0.43
SNX1-203ENST00000558040 TEX28O15482 410 aa17.74■□□□□ 0.43
SNX1-203ENST00000558040 HAPLN1P10915 354 aaPredicted RBP17.74■□□□□ 0.43
SNX1-203ENST00000558040 KRT3P12035 628 aa17.74■□□□□ 0.43
SNX1-203ENST00000558040 ATF2P15336 505 aa17.74■□□□□ 0.43
SNX1-203ENST00000558040 ELF1P32519 619 aa17.74■□□□□ 0.43
SNX1-203ENST00000558040 TKTL1P51854 596 aa17.74■□□□□ 0.43
SNX1-203ENST00000558040 ETF1P62495 437 aaKnown RBP17.74■□□□□ 0.43
SNX1-203ENST00000558040 SLC6A3Q01959 620 aa17.74■□□□□ 0.43
SNX1-203ENST00000558040 GPM6BQ13491 265 aa17.74■□□□□ 0.43
SNX1-203ENST00000558040 OLFML1Q6UWY5 402 aa17.74■□□□□ 0.43
SNX1-203ENST00000558040 TPCN2Q8NHX9 752 aa17.74■□□□□ 0.43
SNX1-203ENST00000558040 FEZF2Q8TBJ5 459 aa17.74■□□□□ 0.43
SNX1-203ENST00000558040 SLC28A3Q9HAS3 691 aa17.74■□□□□ 0.43
SNX1-203ENST00000558040 CHORDC1Q9UHD1 332 aaPredicted RBP17.74■□□□□ 0.43
SNX1-203ENST00000558040 ANAPC7Q9UJX3 599 aa17.74■□□□□ 0.43
SNX1-203ENST00000558040 COG5Q9UP83 839 aa17.74■□□□□ 0.43
SNX1-203ENST00000558040 PCDHGC5Q9Y5F6 944 aa17.74■□□□□ 0.43
SNX1-203ENST00000558040 H3BNC9 293 aa17.73■□□□□ 0.43
SNX1-203ENST00000558040 PAPSS1O43252 624 aaPredicted RBP17.73■□□□□ 0.43
SNX1-203ENST00000558040 CNPP09543 421 aaKnown RBP17.73■□□□□ 0.43
SNX1-203ENST00000558040 ERVFC1P60507 584 aa17.73■□□□□ 0.43
SNX1-203ENST00000558040 SMAD3P84022 425 aaKnown RBP17.73■□□□□ 0.43
SNX1-203ENST00000558040 DUSP4Q13115 394 aa17.73■□□□□ 0.43
SNX1-203ENST00000558040 EFHC1Q5JVL4 640 aa17.73■□□□□ 0.43
SNX1-203ENST00000558040 PLPP4Q5VZY2 271 aa17.73■□□□□ 0.43
SNX1-203ENST00000558040 C11orf63Q6NUN7 778 aa17.73■□□□□ 0.43
SNX1-203ENST00000558040 LLGL2Q6P1M3 1020 aa17.73■□□□□ 0.43
SNX1-203ENST00000558040 SCUBE3Q8IX30 993 aa17.73■□□□□ 0.43
SNX1-203ENST00000558040 SCML4Q8N228 414 aa17.73■□□□□ 0.43
SNX1-203ENST00000558040 MRPL43Q8N983 215 aaKnown RBP17.73■□□□□ 0.43
SNX1-203ENST00000558040 MICAL1Q8TDZ2 1067 aa17.73■□□□□ 0.43
SNX1-203ENST00000558040 SPATA17Q96L03 361 aa17.73■□□□□ 0.43
SNX1-203ENST00000558040 MCEEQ96PE7 176 aa17.73■□□□□ 0.43
SNX1-203ENST00000558040 IRX2Q9BZI1 471 aaPredicted RBP17.73■□□□□ 0.43
SNX1-203ENST00000558040 METTL5Q9NRN9 209 aaKnown RBP17.73■□□□□ 0.43
SNX1-203ENST00000558040 SLC27A5Q9Y2P5 690 aa17.73■□□□□ 0.43
SNX1-203ENST00000558040 CAPN6Q9Y6Q1 641 aa17.73■□□□□ 0.43
SNX1-203ENST00000558040 GRID2IPA4D2P6 1211 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 C2orf71A6NGG8 1288 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 MYO1FO00160 1098 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 FSCN2O14926 492 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 GRM6O15303 877 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 PALMO75781 387 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 GABBR2O75899 941 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 VNN2O95498 520 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 ZBED1O96006 694 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 TNNT1P13805 278 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 DESP17661 470 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 SLC5A3P53794 718 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 MRPS5P82675 430 aaKnown RBP17.72■□□□□ 0.43
SNX1-203ENST00000558040 PPP1R15BQ5SWA1 713 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 SLC26A9Q7LBE3 791 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 GPRIN1Q7Z2K8 1008 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 SPRED2Q7Z698 418 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 DAAM2Q86T65 1068 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 NUP93Q8N1F7 819 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 SLC35F6Q8N357 371 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 TTC9BQ8N6N2 239 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 UBE2Q2Q8WVN8 375 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 IRGQQ8WZA9 623 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 KLHL5Q96PQ7 755 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 ULBP1Q9BZM6 244 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 LMAN2LQ9H0V9 348 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 FBXO44Q9H4M3 255 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 CYP4F11Q9HBI6 524 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 ASNSD1Q9NWL6 643 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 COMMD8Q9NX08 183 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 IP6K2Q9UHH9 426 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 PATJQ8NI35 1801 aa17.72■□□□□ 0.43
SNX1-203ENST00000558040 TMEM191CA6NGB0 347 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms