RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 CCDC127Q96BQ5 260 aa16.99■□□□□ 0.31
SCFD1-224ENST00000557713 FNBP1Q96RU3 617 aa16.99■□□□□ 0.31
SCFD1-224ENST00000557713 B3GNT5Q9BYG0 378 aa16.99■□□□□ 0.31
SCFD1-224ENST00000557713 XYLT2Q9H1B5 865 aa16.99■□□□□ 0.31
SCFD1-224ENST00000557713 DPEP3Q9H4B8 488 aa16.99■□□□□ 0.31
SCFD1-224ENST00000557713 INVSQ9Y283 1065 aa16.99■□□□□ 0.31
SCFD1-224ENST00000557713 CPQQ9Y646 472 aa16.99■□□□□ 0.31
SCFD1-224ENST00000557713 UBE4BO95155 1302 aa16.98■□□□□ 0.31
SCFD1-224ENST00000557713 A0A0A0MRY4 1105 aa16.98■□□□□ 0.31
SCFD1-224ENST00000557713 CUTAO60888 179 aa16.98■□□□□ 0.31
SCFD1-224ENST00000557713 CAVIN2O95810 425 aa16.98■□□□□ 0.31
SCFD1-224ENST00000557713 CHRM1P11229 460 aaPredicted RBP16.98■□□□□ 0.31
SCFD1-224ENST00000557713 KCNA4P22459 653 aa16.98■□□□□ 0.31
SCFD1-224ENST00000557713 SLC6A11P48066 632 aa16.98■□□□□ 0.31
SCFD1-224ENST00000557713 CYP2J2P51589 502 aa16.98■□□□□ 0.31
SCFD1-224ENST00000557713 SEC13P55735 322 aa16.98■□□□□ 0.31
SCFD1-224ENST00000557713 MYL6P60660 151 aa16.98■□□□□ 0.31
SCFD1-224ENST00000557713 TNNC1P63316 161 aa16.98■□□□□ 0.31
SCFD1-224ENST00000557713 MRPS21P82921 87 aaKnown RBP16.98■□□□□ 0.31
SCFD1-224ENST00000557713 CREB5Q02930 508 aa16.98■□□□□ 0.31
SCFD1-224ENST00000557713 DHCR24Q15392 516 aa16.98■□□□□ 0.31
SCFD1-224ENST00000557713 ST3GAL2Q16842 350 aa16.98■□□□□ 0.31
SCFD1-224ENST00000557713 USP39Q53GS9 565 aaKnown RBP16.98■□□□□ 0.31
SCFD1-224ENST00000557713 RNF43Q68DV7 783 aa16.98■□□□□ 0.31
SCFD1-224ENST00000557713 RHBDF2Q6PJF5 856 aa16.98■□□□□ 0.31
SCFD1-224ENST00000557713 UNC13DQ70J99 1090 aa16.98■□□□□ 0.31
SCFD1-224ENST00000557713 NELFCDQ8IXH7 590 aa16.98■□□□□ 0.31
SCFD1-224ENST00000557713 ZNF396Q96N95 335 aaPredicted RBP16.98■□□□□ 0.31
SCFD1-224ENST00000557713 TPSD1Q9BZJ3 242 aa16.98■□□□□ 0.31
SCFD1-224ENST00000557713 ZNF518BQ9C0D4 1074 aa16.98■□□□□ 0.31
SCFD1-224ENST00000557713 ELOVL4Q9GZR5 314 aa16.98■□□□□ 0.31
SCFD1-224ENST00000557713 MMP17Q9ULZ9 603 aa16.98■□□□□ 0.31
SCFD1-224ENST00000557713 SDK1Q7Z5N4 2213 aa16.98■□□□□ 0.31
SCFD1-224ENST00000557713 A8MXQ7 604 aa16.97■□□□□ 0.31
SCFD1-224ENST00000557713 CLDN5O00501 218 aa16.97■□□□□ 0.31
SCFD1-224ENST00000557713 SLC9A3R1O14745 358 aaPredicted RBP16.97■□□□□ 0.31
SCFD1-224ENST00000557713 KCNK5O95279 499 aa16.97■□□□□ 0.31
SCFD1-224ENST00000557713 YEATS4O95619 227 aa16.97■□□□□ 0.31
SCFD1-224ENST00000557713 ABL1P00519 1130 aa16.97■□□□□ 0.31
SCFD1-224ENST00000557713 ATICP31939 592 aa16.97■□□□□ 0.31
SCFD1-224ENST00000557713 MESP2Q0VG99 397 aa16.97■□□□□ 0.31
SCFD1-224ENST00000557713 CRY1Q16526 586 aa16.97■□□□□ 0.31
SCFD1-224ENST00000557713 BMT2Q1RMZ1 405 aa16.97■□□□□ 0.31
SCFD1-224ENST00000557713 PMS2CLQ68D20 193 aa16.97■□□□□ 0.31
SCFD1-224ENST00000557713 C11orf74Q86VG3 221 aa16.97■□□□□ 0.31
SCFD1-224ENST00000557713 C12orf56Q8IXR9 622 aa16.97■□□□□ 0.31
SCFD1-224ENST00000557713 NUP93Q8N1F7 819 aa16.97■□□□□ 0.31
SCFD1-224ENST00000557713 CCDC33Q8N5R6 958 aa16.97■□□□□ 0.31
SCFD1-224ENST00000557713 B3GALNT2Q8NCR0 500 aa16.97■□□□□ 0.31
SCFD1-224ENST00000557713 OLIG1Q8TAK6 271 aa16.97■□□□□ 0.31
SCFD1-224ENST00000557713 CHAMP1Q96JM3 812 aa16.97■□□□□ 0.31
SCFD1-224ENST00000557713 CNOT6LQ96LI5 555 aaKnown RBP16.97■□□□□ 0.31
SCFD1-224ENST00000557713 SLITRK1Q96PX8 696 aa16.97■□□□□ 0.31
SCFD1-224ENST00000557713 PNKPQ96T60 521 aa16.97■□□□□ 0.31
SCFD1-224ENST00000557713 SMPD4Q9NXE4 827 aa16.97■□□□□ 0.31
SCFD1-224ENST00000557713 CFAP97Q9P2B7 532 aa16.97■□□□□ 0.31
SCFD1-224ENST00000557713 ANGPTL2Q9UKU9 493 aa16.97■□□□□ 0.31
SCFD1-224ENST00000557713 K7ELQ4 463 aaPredicted RBP16.96■□□□□ 0.31
SCFD1-224ENST00000557713 HNRNPLP14866 589 aaKnown RBP eCLIP16.96■□□□□ 0.314e-7■■■□□ 15
SCFD1-224ENST00000557713 YWHAQP27348 245 aa16.96■□□□□ 0.31
SCFD1-224ENST00000557713 CASP1P29466 404 aa16.96■□□□□ 0.31
SCFD1-224ENST00000557713 GBP1P32455 592 aa16.96■□□□□ 0.31
SCFD1-224ENST00000557713 EIF2DP41214 584 aaKnown RBP16.96■□□□□ 0.31
SCFD1-224ENST00000557713 SHC2P98077 582 aa16.96■□□□□ 0.31
SCFD1-224ENST00000557713 TRPC3Q13507 836 aa16.96■□□□□ 0.31
SCFD1-224ENST00000557713 ANO7Q6IWH7 933 aa16.96■□□□□ 0.31
SCFD1-224ENST00000557713 TMEM92Q6UXU6 159 aa16.96■□□□□ 0.31
SCFD1-224ENST00000557713 PAQR9Q6ZVX9 377 aa16.96■□□□□ 0.31
SCFD1-224ENST00000557713 SFTPA1Q8IWL2 248 aa16.96■□□□□ 0.31
SCFD1-224ENST00000557713 PLEKHO2Q8TD55 490 aa16.96■□□□□ 0.31
SCFD1-224ENST00000557713 OVCA2Q8WZ82 227 aa16.96■□□□□ 0.31
SCFD1-224ENST00000557713 KCNK16Q96T55 309 aa16.96■□□□□ 0.31
SCFD1-224ENST00000557713 EDEM2Q9BV94 578 aa16.96■□□□□ 0.31
SCFD1-224ENST00000557713 BLZF1Q9H2G9 400 aa16.96■□□□□ 0.31
SCFD1-224ENST00000557713 VRTNQ9H8Y1 702 aa16.96■□□□□ 0.31
SCFD1-224ENST00000557713 MAGEF1Q9HAY2 307 aa16.96■□□□□ 0.31
SCFD1-224ENST00000557713 CGNQ9P2M7 1197 aaKnown RBP16.96■□□□□ 0.31
SCFD1-224ENST00000557713 NXF1Q9UBU9 619 aaKnown RBP16.96■□□□□ 0.31
SCFD1-224ENST00000557713 CACNA1BQ00975 2339 aa16.96■□□□□ 0.3
SCFD1-224ENST00000557713 PVALEFA0A1B0GWK0 134 aa16.95■□□□□ 0.3
SCFD1-224ENST00000557713 TNFRSF10BO14763 440 aa16.95■□□□□ 0.3
SCFD1-224ENST00000557713 SCAMP3O14828 347 aaKnown RBP16.95■□□□□ 0.3
SCFD1-224ENST00000557713 POLR2DO15514 142 aaKnown RBP16.95■□□□□ 0.3
SCFD1-224ENST00000557713 RTN3O95197 1032 aaPredicted RBP16.95■□□□□ 0.3
SCFD1-224ENST00000557713 KAT7O95251 611 aa16.95■□□□□ 0.3
SCFD1-224ENST00000557713 MBL2P11226 248 aaPredicted RBP16.95■□□□□ 0.3
SCFD1-224ENST00000557713 BCKDHBP21953 392 aa16.95■□□□□ 0.3
SCFD1-224ENST00000557713 CDH8P55286 799 aa16.95■□□□□ 0.3
SCFD1-224ENST00000557713 SNX30Q5VWJ9 437 aa16.95■□□□□ 0.3
SCFD1-224ENST00000557713 C12orf40Q86WS4 652 aa16.95■□□□□ 0.3
SCFD1-224ENST00000557713 DDX42Q86XP3 938 aaKnown RBP eCLIP16.95■□□□□ 0.3
SCFD1-224ENST00000557713 ALLCQ8N6M5 410 aa16.95■□□□□ 0.3
SCFD1-224ENST00000557713 IL17RCQ8NAC3 791 aa16.95■□□□□ 0.3
SCFD1-224ENST00000557713 PDZD8Q8NEN9 1154 aa16.95■□□□□ 0.3
SCFD1-224ENST00000557713 MDGA1Q8NFP4 955 aa16.95■□□□□ 0.3
SCFD1-224ENST00000557713 SYAP1Q96A49 352 aaPredicted RBP16.95■□□□□ 0.3
SCFD1-224ENST00000557713 ZFRQ96KR1 1074 aaKnown RBP16.95■□□□□ 0.3
SCFD1-224ENST00000557713 SLC39A2Q9NP94 309 aa16.95■□□□□ 0.3
SCFD1-224ENST00000557713 IL37Q9NZH6 218 aa16.95■□□□□ 0.3
SCFD1-224ENST00000557713 TBC1D14Q9P2M4 693 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms